Methods to quantify components of the excavating sponge Cliona orientalis Thiele, 1900

This study applied the loss after combustion (LAC) method and the acid decalcification (ADC) method to quantify different components of an excavating sponge. Samples of dried coral skeleton of Favia sp. invaded by the Indo‐Pacific excavating sponge Cliona orientalis Thiele, 1900 were used. The sponge tissue penetrated the 12‐mm‐thick samples to approximately 10 mm. The average proportional weight of organic matter, siliceous spicules, calcareous substrate and salts in the entire samples was found to be respectively 2.5%, 4.4%, 90.5% and 2.5% of dry weight applying the LAC method, and 2.9%, 5.9%, 89.0% and 2.3% of dry weight applying the ADC method. Respective volumetric proportions of the organic matter, spicules, substrate and salts were then calculated to be 6.4%, 5.5%, 85.2% and 3.0% of volume with the LAC method, and 7.4%, 7.2%, 82.7% and 2.7% of volume with the ADC method. The LAC method showed low variability of data and is simple and fast and therefore is recommended. The ADC method generated very similar results to the LAC method. However, due to the handling involved in the ADC method, more than half of the spicules may be lost and the method is therefore not recommended unless careful data corrections are considered. In addition, the buoyant weight method was used to quantify actual substrate weight in the fresh sponge‐substrate samples. This method was found to be at least 97% effective, revealing that buoyant weights can potentially be used to quantify bioerosion rates of excavating sponges. To our knowledge, this is the first study to systemically quantify organic and inorganic components of an excavating sponge and its calcareous substrate, providing improved standard methods for future studies.     

Formation of pristane from α-tocopherol under simulated anoxic sedimentary conditions: A combination of biotic and abiotic degradative processes

Incubation of intact and oxidized α-tocopherol (vitamin E) in anaerobic sediment slurries allowed us to demonstrate that, as previously suggested by Goossens et al. (1984), the degradation of α-tocopherol in anoxic sediments results in the formation of pristane. The conversion of α-tocopherol to this isoprenoid alkane involves a combination of biotic and abiotic degradative processes, i.e. the anaerobic biodegradation (which seems to be mainly induced by denitrifying bacteria) of trimeric structures resulting from the abiotic oxidation of α-tocopherol. On the basis of the results obtained, it is proposed that in the marine environment most of the α-tocopherol present in phytoplanktonic cells should be quickly degraded within the water column and the oxic zone of sediments by way of aerobic biodegradation, photo- and autoxidation processes. Abiotic transformation of this compound mainly results in the production of trimeric oxidation products, sufficiently stable to be incorporated into anoxic sediments and whose subsequent anaerobic bacterial degradation affords pristane. These results confirm that the ratio pristane to phytane cannot be used as an indicator of the oxicity of the environment of deposition; in contrast, they support the use of PFI (Pristane Formation Index) as a proxy for the state of diagenesis of sedimentary organic matter.     

Density,Shell Use and Species Composition of Juvenile Fiddler Crabs (Uca spp.) at Low and High Anthropogenic Impact Salt Marsh Sites

Coastal wetlands worldwide have been negatively impacted by humans, causing decreases in the vegetation used as a refuge from predation by juveniles of many species. This study examined juvenile fiddler crab densities and species composition (Uca pugnax, Uca pugilator, and Uca minax), and their use of gastropod shells (Littorina littoraria), at three low and three high impact sites on barrier islands in southeast Georgia. On six dates in June–August 2010, samples were taken from 10 quadrats (1 m²) at each site to determine juvenile fiddler crab densities and species composition, as well as gastropod shell densities and percent shell use. Multiplex PCR was used to identify juvenile fiddler crabs to species. Juvenile fiddler crab densities were lower at high impact sites, while gastropod shell densities and shell use were similar at both low and high impact sites. Species compositions differed between low and high impact sites on the substrate and in shells, with more U. pugilator and U. minax at high impact sites. A change in fiddler crab densities and species composition could cause a substantial change in southeastern salt marshes.     

Interactions and connectivity between runoff generation processes of different spatial scales

Monitoring runoff generation processes in the field is a prerequisite for developing conceptual hydrological models and theories. At the same time, our perception of hydrological processes strongly depends on the spatial and temporal scale of observation. Therefore, the aim of this study is to investigate interactions between runoff generation processes of different spatial scales (plot scale, hillslope scale, and headwater scale). Different runoff generation processes of three hillslopes with similar topography, geology and soil properties, but differences in vegetation cover (grassland, coniferous forest, and mixed forest) within a small v‐shaped headwater were measured: water table dynamics in wells with high spatial and temporal resolution, subsurface flow (SSF) of three 10 m wide trenches at the bottom of the hillslopes subdivided into two trench sections each, overland flow at the plot scale, and catchment runoff. Bachmair et al. ( 2012 ) found a high spatial variability of water table dynamics at the plot scale. In this study, we investigate the representativity of SSF observations at the plot scale versus the hillslope scale and vice versa, and the linkage between hillslope dynamics (SSF and overland flow) and streamflow. Distinct differences in total SSF within each 10 m wide trench confirm the high spatial variability of the water table dynamics. The representativity of plot scale observations for hillslope scale SSF strongly depends on whether or not wells capture spatially variable flowpaths. At the grassland hillslope, subsurface flowpaths are not captured by our relatively densely spaced wells (3 m), despite a similar trench flow response to the coniferous forest hillslope. Regarding the linkage between hillslope dynamics and catchment runoff, we found an intermediate to high correlation between streamflow and hillslope hydrological dynamics (trench flow and overland flow), which highlights the importance of hillslope processes in this small watershed. Although the total contribution of SSF to total event catchment runoff is rather small, the contribution during peak flow is moderate to substantial. Additionally, there is process synchronicity between spatially discontiguous measurement points across scales, potentially indicating subsurface flowpath connectivity. Our findings stress the need for (i) a combination of observations at different spatial scales, and (ii) a consideration of the high spatial variability of SSF at the plot and hillslope scale when designing monitoring networks and assessing hydrological connectivity. Copyright © 2013 John Wiley & Sons, Ltd.     

Bayesian estimation of intensity–duration–frequency curves and of the return period associated to a given rainfall event

Intensity–duration–frequency (IDF) curves are used extensively in engineering to assess the return periods of rainfall events and often steer decisions in urban water structures such as sewers, pipes and retention basins. In the province of Québec, precipitation time series are often short, leading to a considerable uncertainty on the parameters of the probabilistic distributions describing rainfall intensity. In this paper, we apply Bayesian analysis to the estimation of IDF curves. The results show the extent of uncertainties in IDF curves and the ensuing risk of their misinterpretation. This uncertainty is even more problematic when IDF curves are used to estimate the return period of a given event. Indeed, standard methods provide overly large return period estimates, leading to a false sense of security. Comparison of the Bayesian and classical approaches is made using different prior assumptions for the return period and different estimation methods. A new prior distribution is also proposed based on subjective appraisal by witnesses of the extreme character of the event.     

Households’ Resilience to Hurricanes in Coastal Communities of Oaxaca,Mexico

Hurricanes represent a common threat to coastal communities, affecting livelihood strategies and assets. Households are resilient if they can recover from a stress or shock while maintaining and arranging assets to secure a sustainable livelihood. The objective of this research is to measure the degree of resilience in the coastal households of Oaxaca, Mexico, following a hurricane using the asset approach and describing diversity, connectivity, and slow variables. The results show different degrees of resilience among the households and that social, natural, and financial capital are relevant to resilience. The diversification of income, savings, community help, natural resource use, and government transfers is among the most important assets. In particular, social capital and natural capital determine the structure and dynamics of the system.     

How light affect the magnetotactic behavior and reproduction of ellipsoidal multicellular magnetoglobules?

Journal of Oceanology and Limnology - Magnetotactic bacteria (MTB) synthesize intracellular magnetic organelles, magnetosomes, which consist of magnetic crystals that are enveloped in a membrane....     

Comparison of polynomial chaos and Gaussian process surrogates for uncertainty quantification and correlation estimation of spatially distributed open-channel steady flows

Data assimilation is widely used to improve flood forecasting capability, especially through parameter inference requiring statistical information on the uncertain input parameters (upstream discharge, friction coefficient) as well as on the variability of the water level and its sensitivity with respect to the inputs. For particle filter or ensemble Kalman filter, stochastically estimating probability density function and covariance matrices from a Monte Carlo random sampling requires a large ensemble of model evaluations, limiting their use in real-time application. To tackle this issue, fast surrogate models based on polynomial chaos and Gaussian process can be used to represent the spatially distributed water level in place of solving the shallow water equations. This study investigates the use of these surrogates to estimate probability density functions and covariance matrices at a reduced computational cost and without the loss of accuracy, in the perspective of ensemble-based data assimilation. This study focuses on 1-D steady state flow simulated with MASCARET over the Garonne River (South-West France). Results show that both surrogates feature similar performance to the Monte-Carlo random sampling, but for a much smaller computational budget; a few MASCARET simulations (on the order of 10–100) are sufficient to accurately retrieve covariance matrices and probability density functions all along the river, even where the flow dynamic is more complex due to heterogeneous bathymetry. This paves the way for the design of surrogate strategies suitable for representing unsteady open-channel flows in data assimilation.     

Improving vertical GPS precision with a GPS-over-fiber architecture and real-time relative delay calibration

A limitation of GPS positioning is that the vertical component is generally two to three times less precise than the horizontal components. In a previous work by R. Santerre of Laval University and G. Beutler of University of Bern, it was shown in simulations that it is possible to improve the GPS vertical positioning precision by using a multi-antenna GPS receiver and a precise calibration technique of the relative hardware delay between the antennas and the receiver. However, no actual implementation of the system was done to prove the concept until now. A new multi-antenna, GPS-over-fiber architecture with real-time delay monitoring, designed and implemented to improve the vertical precision is presented. The improvement in vertical precision arises from the elimination of the relative receiver clock error in single difference, between antennas, and the precision real-time calibration of the relative hardware delay. Experiments were conducted with a zero baseline and a short baseline configuration. The results show, as expected by the theory and the simulations, a two to three times improvement in the precision of the vertical component such that it reached the same level of performance as the horizontal components. These promising results will enable the use of this type of configuration in several applications where the same precision in all 3D components is essential and could not be achieved before with standard GPS positioning techniques.     

Effects of inter- and intraspecific competition on growth and development of Bufo viridis and Bufo bufo tadpoles

Competition between the common toad Bufo bufo (L.) and the green toad Bufo viridisLaurenti was studied in an experimental design. Mixed and single-species groups of 40 larvae were reared in plastic tanks (water volume 411). Growth parameters such as body length, total length, body mass and developmental stage according to Gosner (1960) were measured weekly until metamorphic climax and analyzed by regression analysis. Body condition index was calculated. Tadpoles of B. bufo reached metamorphosis at the same time in mixed and single-species treatments. Larvae and toadlets were insignificantly larger in single-species groups, weighed more and had a higher body condition index than in mixed species designs. In B. viridis the larval period was six days shorter in mixed groups; tadpoles and toadlets were smaller but had a higher body condition index than in the single-species treatment. These results indicate high intraspecific competition in B. viridis and competitive inferiority of B. bufo to B. viridis under the experimental conditions.