Long-term perspective on the relationship between phytoplankton and nutrient concentrations in a southeastern Australian estuary

Sixteen years (1997–2013) of physicochemical, nutrient and phytoplankton biomass (Chlorophyll-a (Chl-a)) data and a decade (2003-2013) of phytoplankton composition and abundance data were analyzed to assess how the algal community in a temperate southeastern Australian estuary has responded to decreased chronic point source nitrogen loading following effluent treatment upgrade works in 2003. Nitrogen concentrations were significantly lower (P < 0.05) following enhanced effluent treatment and Chl-a levels decreased (P < 0.05) during the warmer months. Temperature and nutrient concentrations significantly influenced temporal changes of Chl-a (explaining 55% of variability), while salinity, temperature, pH and nutrient concentrations influenced phytoplankton abundance and composition (25% explained). Harmful Algal Bloom (HAB) dynamics differed between sites likely influenced by physical attributes of the estuary. This study demonstrates that enhanced effluent treatment can significantly decrease chronic point source nitrogen loading and that Chl-a concentrations can be lowered during the warmer months when the risk of blooms and HABs is greatest.     

Water quality, nutrients and the water framework directive in an agricultural region: The lower Humber Rivers, northern England

The water quality of rivers in the eastern part of the Humber Basin, north-eastern England is described from a baseflow survey (11–13 August 2006) of a wide range of water quality determinants, and long-term nutrient records of the Environment Agency of England and Wales (EA). The baseflow survey shows that the rivers are oversaturated with respect to dissolved CO₂ and calcite. They are sodium, potassium, lithium, boron, chloride, sulphate and fluoride bearing from a combination of atmospheric, within-catchment, agricultural and sewage effluent sources. Nitrate concentrations are uniform for rivers draining permeable bedrock but decrease for clay drainage areas. Soluble reactive phosphorus (SRP) concentrations are variable across the catchments reflecting the importance and variability of point sources and within-river processing. The EA data show annual oscillations for both NO₃ and SRP concentrations. Average NO₃ concentrations vary between 3.3 and 18.8 mgN/l and concentrations are low during the summer months. Average SRP concentrations vary between 23 and 1959 μg/l. Highest SRP concentrations generally occur when there is effluent input from sewage treatment works and agricultural point sources (e.g. overflow from slurry tanks, farmyard washings). Despite many of the rivers being nutrient rich, they are generally of good biological quality when point source inputs are not important.     

A suggested re-interpretation of the Lower Palaeozoic stratigraphy around Llanafan Fawr,Central Wales

A recent paper by Lockley (1978) described the stratigraphy of the Towy Anticline around Llanafan Fawr, Brecknock, based on the proposition that there exists a syncline which crosses the Chwefru Valley at Lan Fach. Way up evidence from the area indicates the absence of this fold and a rearrangement of the local stratigraphical sequence is therefore necessary. The revised stratigraphy resembles much more closely that of other sections across the Towy Anticline in south Central Wales.     

Longitudinal distributions of river flood power: the combined automated flood,elevation and stream power (CAFES) methodology

Stream power can be an extremely useful index of fluvial sediment transport, channel pattern, river channel erosion and riparian habitat development. However, most previous studies of downstream changes in stream power have relied on field measurements at selected cross‐sections, which are time consuming, and typically based on limited data, which cannot fully represent important spatial variations in stream power. We present here, therefore, a novel methodology we call CAFES (combined automated flood, elevation and stream power), to quantify downstream change in river flood power, based on integrating in a GIS framework Flood Estimation Handbook systems with the 5 m grid NEXTMap Britain digital elevation model derived from IFSAR (interferometric synthetic aperture radar). This provides a useful modelling platform to quantify at unprecedented resolution longitudinal distributions of flood discharge, elevation, floodplain slope and flood power at reach and basin scales. Values can be resolved to a 50 m grid. CAFES approaches have distinct advantages over current methodologies for reach‐ and basin‐scale stream power assessments and therefore for the interpretation and prediction of fluvial processes. The methodology has significant international applicability for understanding basin‐scale hydraulics, sediment transport, erosion and sedimentation processes and river basin management. Copyright © 2008 John Wiley & Sons, Ltd.     

Modelling the influence of small-scale effects upon the larger scale: an oceanographic challenge

The problem of resolving or parameterising small-scale processes in oceanographic models and the extent to which small-scale effects influence the large scale are briefly discussed and illustrated for a number of cases. For tides and surges in near-shore regions, the advantages of using a graded mesh to resolve coastal and estuarine small-scale features are demonstrated in terms of a west coast of Britain unstructured mesh model. The effect of mesh resolution upon the accuracy of the overall solution is illustrated in terms of a finite element model of the Irish Sea and Mersey estuary. For baroclinic motion at high Froude number, the effect of resolving small-scale topography within a non-hydrostatic model is illustrated in terms of tidally induced mixing at a single sill, or two closely spaced sills. The question of how to parameterise small-scale non-linear interaction processes that lead to significant mixing, in a form suitable for coarser grid hydrostatic models, is briefly considered. In addition, the importance of topographically induced mixing that occurs in the oceanic lateral boundary layer, namely, the shelf edge upon the large-scale ocean circulation is discussed together with the implications for coarse grid oceanic climate models. The use of unstructured grids in these models to enhance resolution in shelf-edge regions in a similar manner to that used in storm surge models to enhance near coastal resolution is suggested as a suitable “way forward” in large-scale ocean circulation modelling.     

Effect of water depth and the bottom boundary layer upon internal wave generation over abrupt topography

The role of water depth and bottom boundary layer turbulence upon lee-wave generation in sill regions is examined. Their effect upon vertical mixing is also considered. Calculations are performed using a non-hydrostatic model in cross-section form with a specified tidal forcing. Initial calculations in deeper water and a sill height such that the sill top is well removed from the surrounding bed region showed that downstream lee-wave generation and associated mixing increased as bottom friction coefficient k increased. This was associated with an increase in current shear across the sill. However, for a given k, increasing vertical eddy viscosity A _v reduced vertical shear in the across sill velocity, leading to a reduction in lee-wave amplitude and associated mixing. Subsequent calculations using shallower water showed that for a given k and A _v, lee-wave generation was reduced due to the shallower water depth and changes in the bottom boundary layer. However, in this case (unlike in the deepwater case), there is an appreciable bottom current. This gives rise to bottom mixing which in shallow water extends to mid-depth and enhances the mid-water mixing that is found on the lee side of the sill. Final calculations with deeper water but small sill height showed that lee waves could propagate over the sill, thereby reducing their contribution to mixing. In this case, bottom mixing was the major source of mixing which was mainly confined to the near bed region, with little mid-water mixing.     

Morphological controls in sandy estuaries: the influence of tidal flats and bathymetry on sediment transport

The morphodynamics of shallow, vertically well-mixed estuaries, characterised by tidal flats and deeper channels, have been investigated. This paper examines what contributes to flood/ebb-dominant sediment transport in localised regions through a 2D model study (using the TELEMAC modelling system). The Dyfi Estuary in Wales, UK has been used as a case study and, together with idealised estuary shapes, shows that shallow water depths lead to flood dominance in the inner estuary whilst tidal flats and deep channels cause ebb dominance in the outer estuary. For medium sands and with an artificially ‘flattened’ bathymetry (i.e. no tidal flats), the net sediment transport switches from ebb-dominant to flood-dominant where the parameter a/h (local tidal amplitude ÷ local tidally averaged water depth) exceeds 1.2. Sea level rise will reduce this critical value of a/h and also reduce the ebb-directed sediment transport significantly, leading to a flood-dominated estuarine system. A similar pattern, albeit with greater transport, was simulated with tidal flats included and also with a reduced grain size. This suggests that analogous classifications for flood/ebb asymmetry of the tide in estuaries as a whole may not represent the local sediment transport in sufficient detail. Through the Dyfi simulations, the above criterion involving a/h is shown to be complicated further by augmented flow past a spit at the estuary mouth which gives rise to a self-maintaining scour hole. Simulations of one year of bed evolution in an idealised flat-bottomed estuary, including tidal flow past a spit, recreate the flood/ebb dominance on either side of the spit and the formation of a scour hole in between. The erosion rate at the centre of the hole is reduced as the hole deepens, suggesting the establishment of a self-maintaining equilibrium state.     

The thermal signature of volcanic eruptions on Io and Earth

We investigate a spectrum-based technique to identify the style of active volcanic eruptions on Jupiter's moon Io. Thermal remote sensing of Io has had to rely primarily on low-spatial-resolution data, similar to low-spatial-resolution satellite data applied to detecting and charting the temporal evolution of terrestrial hot spots. These terrestrial analyses use data from sensors designed to monitor the weather and sea surface temperature. On Io, such low-spatial-resolution data are used to classify eruption styles (modes of emplacement) by means of several criteria related to the temporal evolution of the infrared spectrum associated with the eruptive activity at each hot spot, which we term “thermal signature.” We find that the ratio of the emission at 2 and 5 µm, and how this ratio changes with time, is often diagnostic of eruption style, even in low-spatial-resolution data. Tests using thermal data for terrestrial “ground truth” cases show that our classification system is valid on Earth. The results of our analysis can be used to aid in the design of future space-based instruments that can be used for volcano monitoring on Io, as well as Earth.     

Temporal discontinuity of nutrient limitation in plankton communities

Ideas on how various measures of nutrient limitation relate to plankton biomass and species composition are re-examined. While long-term and multi-lake studies typically focus on determining overall biomass, seasonal studies are more focused toward understanding species composition. We use physiological assays to assess short-term nutrient deficiency of nitrogen and phosphorus in two moderately fertile lakes. While biomass in the lakes was considered to ultimately be limited by total phosphorus, nutrient assays were variable in time. Nutrient ratios (TN:TP, PN:PP, PC:PP and PC:PN) did not predict short-term deficiencies, notably that nitrogen deficiency occurred in these phosphorus-limited lakes. In one of our study lakes, there was a relaxation of phosphorus deficiency despite phosphate concentrations occurring below traditional detection limits. Following this period, there was an autumn bloom of Aphanizomenon flos-aquae. This relationship corresponds with other studies that have found A. flos-aquae to be a poor competitor for phosphorus. In contrast, phosphorus deficiency remained high prior to the autumn diatom bloom in our other study lake. Deficiency measures remain an excellent means of assessing physiological status of plankton communities and provide greater insight into species compositional changes, especially when other potential indicators like dissolved nutrient concentrations are inconclusive. Regardless of the nutrient limitation indicator used for a given study, it is critical to consider the appropriate scale of the measure.