Principal fault zone width and permeability of the active Neodani fault, Nobi fault system, Southwest Japan

The internal structure and permeability of the Neodani fault, which was last activated at the time of the 1891 Nobi earthquake (M8.0), were examined through field survey and experiments. A new exposure of the fault at a road construction site reveals a highly localized feature of the past fault deformation within a narrow fault core zone. The fault of the area consists of three zone units towards the fault core: (a) protolith rocks; (b) 15 to 30 m of fault breccia, and (c) 200 mm green to black fault gouge. Within the fault breccia zone, cataclastic foliation oblique to the fault has developed in a fine-grained 2-m-wide zone adjacent to the fault. Foliation is defined by subparallel alignment of intact lozenge shaped clasts, or by elongated aggregates of fine-grained chert fragments. The mean angle of 20°, between the foliation and the fault plane suggests that the foliated breccia accommodated a shear strain of γ<5 assuming simple shear for the rotation of the cataclastic foliation. Previous trench surveys have revealed that the fault has undergone at least 70 m of fault displacement within the last 20,000 years in this locality. The observed fault geometry suggests that past fault displacements have been localized into the 200-mm-wide gouge zone. Gas permeability analysis of the gouges gives low values of the order of 10⁻²⁰ m². Water permeability as low as 10⁻²⁰ m² is therefore expected for the fault gouge zone, which is two orders of magnitude lower than the critical permeability suggested for a fault to cause thermal pressurization during a fault slip.     

Cloning and sequencing of the allophycocyanin genes fromSpirulina maxima (Cyanophyta)

The genes coding for the α-and β-subunit of allophycocyanin (apcA andapcB) from the cyanophyteSpirulina maxima were cloned and sequenced. The results revealed 44.4% of nucleotide sequence similarity and 30.4% of similarity of deduced amino acid sequence between them. The amino acid sequence identities betweenS. maxima andS. platensis are 99.4% for α subunit and 100% for β subunit.

     

Transposable genetic elements inSpirulina and potential applications for genetic engineering

Transposable elements in cyanobacteria are briefly reviewed. Evidence is presented to show that transposable elements inSpirulina platensis is actually reflected on the phenotype change, i e., helical to straight filaments. Transposition intermediates of DNA were isolated from the extrachromosome and the transposition was related to helical variations inSpirulina. Uses of transposable elements for microalgal recombination are discussed based on the transposition mechanism.

     

Middle Miocene to Pleistocene radiolarian biostratigraphy in the Northwest Pacific Ocean, ODP Leg 186

Abstract The Upper Cenozoic sedimentary sequences drilled at Sites 1150 and 1151, Ocean Drilling Program Leg 186, enabled establishment of radiolarian zonation and calibration of the age of bioevents in the forearc area of the northern Japan Islands. The sequences were divided into nine zones from the Pleistocene Botryostrobus aquilonaris Zone to the Upper Miocene Lipmanella redondoensis Zone at Site 1150, and 11 zones from the Pleistocene Stylatractus universus Zone to the Middle Miocene Dendrospyris? sakaii Zone at Site 1151. These zones correlate successfully with the studied sequences of many of deep‐sea cores in the Northwest Pacific Ocean and with some sections of onshore Japan. Of 67 important radiolarian bioevents recognized during the study, 29 Pleistocene to Upper Miocene events were directly tied to the geomagnetic polarity time scale through the well‐defined paleomagnetic polarity records, and 21 Upper Miocene events were calibrated based on the diatom biostratigraphy. Of these events, 24 geographically widespread events were selected to test synchroneity and usefulness as time‐horizons within the mid‐to‐high latitude of the Northwest Pacific, involving eight other offshore and onshore sections. Examination showed that most of the zonal boundary events are synchronous within the considered region, and that many diachronous events, most of which are eliminated from the zonal scheme, are unreliable events linked to rare and sporadic occurrences of the species. Radiolarian biostratigraphy of the studied cores clearly indicates three major hiatuses in the Middle Pleistocene, Late Miocene and late Middle Miocene. The latter two hiatuses can be correlated to two global oceanic hiatuses, NH6 and NH3, respectively.     

Fourier transform infrared microspectroscopic characterization of Neoproterozoic organic microfossils from the Fifteenmile Group in Yukon,Canada

Conventional and synchrotron radiation‐based (SR) Fourier transform infrared microspectroscopies (micro‐FTIR) were applied to four types of ~ 810 Ma organic‐walled microfossils together with diffuse organic matter (OM) and one irregularly shaped structure from the Fifteenmile Group, in Yukon, Canada, for their chemical characterization. The microfossils comprised one filamentous type and three coccoidal types. Micro‐FTIR mapping analysis revealed the micrometer‐scale, spatial distribution of organic components (aliphatic C‐H bonds) and carbonate in the microfossils. Based on comparisons of CH₃/CH₂ peak height ratios (R_3/2) and morphologies of the microfossils (without the diffuse OM) to those of previously described Proterozoic microfossils, possible affinities of the microfossils are suggested, as follows. Palaeolyngbya? and Glenobotrydion belong to bacteria. Myxococcoides is not clearly characterized due to the significant mixing with diffuse OM containing abundant aliphatic C‐H groups. The irregularly shaped structure may represent a eukaryote. The diffuse OM may represent a mixture of decomposed microbial cells and extracellular polymeric substances (EPS). SR micro‐FTIR measurements of two coccoid types (Glenobotrydion and Unnamed Coccoid Form D) revealed that the R_3/2 values of the internal spots with wall structures are similar to those without wall structures in Glenobotrydion: those values from Unnamed Coccoid Form D were different. The results suggest that these two coccoids are different chemically as well as morphologically. Micro‐FTIR characterization of the organic‐walled microfossils together with morphological analysis provides new insight into their biological affinities.     

The role of megatides and relative sea level in controlling the deglaciation of the British–Irish and Fennoscandian ice sheets

Key external forcing factors have been proposed to explain the collapse of ice sheets, including atmospheric and ocean temperatures, subglacial topography, relative sea level and tidal amplitudes. For past ice sheets it has not hitherto been possible to separate relative sea level and tidal amplitudes from the other controls to analyse their influence on deglaciation style and rate. Here we isolate the relative sea level and tidal amplitude controls on key ice stream sectors of the last British–Irish and Fennoscandian ice sheets using published glacial isostatic adjustment models, combined with a new and previously published palaeotidal models for the NE Atlantic since the Last Glacial Maximum (22 ka BP). Relative sea level and tidal amplitude data are combined into a sea surface elevation index for each ice stream sector demonstrating that these controls were potentially important drivers of deglaciation in the western British Irish Ice Sheet ice stream sectors. In contrast, the Norwegian Channel Ice Stream was characterized by falling relative sea level and small tidal amplitudes during most of the deglaciation. As these simulations provide a basis for observational field testing we propose a means of identifying the significance of sea level and tidal amplitudes in ice sheet collapse.     

A new climatology of the Okhotsk Sea derived from the FERHRI database

This paper introduces a new hydrographic climatology of the Okhotsk Sea; this climatology was constructed from the Far Eastern Regional Hydrometeorological Research Institute (FERHRI) database. The FERHRI database has a volume of data three to five times larger than the data used in previous studies because unpublished Russian observation data have been included in the FERHRI database. After removing erroneous data from the database by pertinent quality control methods, the climatology for 1/4°?×?1/4° grids is produced by applying objective analysis procedures. Features similar to those in previous studies are seen in the intermediate layers in the Okhotsk Sea, whereas our climatology provides values that fill in gaps in previous climatologies. It is obvious from the monthly climatologies that temperature and salinity distributions evolve in accordance with seasonal variations in the Eastern Sakhalin Current and inflow from the North Pacific. We also reconstructed climatologies for the winter mixed layer and dense shelf water from data obtained from the temperature minimum waters identified as the remnants of these two layers. Free access to the 1°?×?1° versions of all climatologies constructed in this study is available through the website.     

Post-glacial sediment dynamics in the Irish Sea and sediment wave morphology: Data–model comparisons

The irregular seafloor of the narrow Irish Sea on the NW European Shelf has been documented over several decades. From recently collected swath bathymetry data, very large trochoidal, nearly symmetrical sediment waves are observed in many parts of the Irish Sea and appear similar to those described from other continental shelf seas in North America that were covered by glacigenic sediments during the Last Glacial Maximum. Swath multibeam and single beam bathymetry data, backscatter intensity, shallow seismic imagery, video footage and sediment cores from the Irish Sea high sediment waves have been integrated to identify their genesis with reference to present and past hydrodynamic variability. From cross-sectional profiles over asymmetrical sediment waves in the Irish Sea the direction of asymmetry is used to map residual bed stress directions and associated bedload transport paths. Irish Sea peak bed stress vectors were generated using a two-dimensional palaeo-tidal model for the NW European shelf seas and compare well with the observations. Tidally induced bed stresses are modelled to have increased between 7–10 ka BP, to be nearly symmetrical in magnitude and to have reversed in dominant direction on a millennial scale. These environmental conditions during the post-glacial marine transgression are suggested here to help comprehend the construction of the very large sediment waves, with local variations due to differences in sediment grain size, sediment supply, water depth and intensified currents due to seafloor slopes. Model parameterisation using an open ocean boundary with time-dependent tidal changes and the implementation of high-resolution bathymetric information will improve future models of small-scale bed shear stress patterns and improve the predictive value of such modelling efforts.     

Erosion and accretion processes in a muddy dissipative coast,the Chao Phraya River delta,Thailand

Seasonal variation in seabed elevation in the muddy intertidal zone of the Chao Phraya River delta, an area of serious coastal erosion for 40 years, was assessed using information on waves and tides predicted by numerical simulations. The study area is under the influence of the Southeast Asian monsoon climate and lies in the innermost part of a sheltered gulf, across which a low‐gradient slope has developed. Observations, aimed at evaluating the effectiveness of a prototype breakwater on mitigating coastal erosion, indicated that the seasonal variation in the seabed elevation, typically about 30 cm, was caused primarily by seasonal changes in wave direction and height. The breakwater seems to have contributed to a net rise in the seabed level at sites behind the structure. Seabed erosion was most apparent during the northeast monsoon, when waves are weak. Erosion under this low wave energy state was attributed to the combined effect of wave breaking and the low tidal level. A difference in the observed seabed accretion rate between the transitional intermonsoon period and the succeeding southwest monsoon period was attributed to the direction of the wave energy flux; offshore sediments seem to have been supplied efficiently to the study area by waves during the transitional period. Another potential cause of seabed erosion and accretion during the wet southwest monsoon season was the discharge of water and sediments from local canals associated with intense tropical rainfall; this discharge seems to be linked to land use in the coastal area. The results of this study show the importance of monitoring across‐shore sediment transport for better understanding of coastal erosion processes. Copyright © 2010 John Wiley & Sons, Ltd.     

Assessing the role of forests in mitigating eutrophication downstream of pasture during spring snowmelt

Little research has examined whether forests reduce stream water eutrophication in agricultural areas during spring snowmelt periods. This study evaluated the role of forests in ameliorating deteriorated stream water quality in agricultural areas, including pasture, during snowmelt periods. Temporal variation in stream water quality at a mixed land‐use basin (565 ha: pasture 13%, forestry 87%), northern Japan, was monitored for 7 years. Synoptic stream water sampling was also conducted at 16 sites across a wide range of forest and agricultural areas in a basin (18.3 km²) in spring, summer and fall. Atmospheric nitrogen (N) and phosphorus (P) deposition were measured for 4 years. The results showed that concentration pulses of nitrate, organic N and total P in stream water were observed when discharge increased during spring snowmelt. Their concentrations were high when silicate concentrations were low, suggesting surface water exported from pasture largely contributed to stream water pollution during snowmelt. Atmospheric N and P deposition (4.1 kg N ha^?1 y^?1; 0.09 kg P ha^?1 y^?1, respectively) was too low to affect the background concentrations of N and P in streams from forested areas. Reduction of eutrophication caused by nutrients from pasture was mainly due to dilution by water containing low concentrations of N and P exported from forested areas, whereas in‐stream reduction was not a dominant process. Results indicate that forests have a limited capacity to reduce the concentration pulses of N and P in stream water during snowmelt in this study basin. Copyright © 2014 John Wiley & Sons, Ltd.