Data sharing and retrieval using OAI-PMH

There is a growing consensus for the need to store and archive digital data, particularly for publicly funded research. Long-term preservation of that data generally requires some form of institutional archive, such as those directed to particular scientific communities of practice. Given that data is often of use to multiple communities of practice, which may have differing norms for data and metadata structure and semantics, effective standards for data and metadata exchange are important factors for users to be able to find and retrieve data. Toolsets that provide a coherent presentation of information across multiple standards are important for data search and access. One such toolset, Mercury, is a open-source metadata harvesting, data discovery, and access system, built for researchers to search for, share and obtain spatiotemporal data used across a range of climate and ecological sciences. Mercury is used across multiple projects to provide a coherent search interface for spatiotemporal data described in any of several metadata formats. Mercury has recently been extended to enable harvesting and distribution of metadata using the Open Archive Initiative Protocol for Metadata Handling (OAI-PMH). In this paper we describe Mercury’s capabilities with multiple metadata formats, in general, and, more specifically, the results of our OAI-PMH implementations and the lessons learned.     

Can UV radiation affect benthic deposit-feeders through biochemical alteration of food resources? An experimental study with juveniles of the benthic polychaete Eupolymnia nebulosa

The growth, tentacle development and feeding activity of the benthic polychaete Eupolymnia nebulosa were examined to determine whether UV might affect marine deposit-feeders indirectly through the modification of the nutritional quality of their resources. Since marine invertebrates have higher nutritional requirements during the period following settlement, we tested the effect of UV-altered phytodetritus on freshly settled juveniles of E. nebulosa. Phytodetritus was prepared from cultures of the diatom Skeletonema costatum either grown under or sheltered from UVB radiation. Sterol content of phytodetritus was unmodified by UV radiation. Conversely, phytodetritus was noticeably depleted in polyunsaturated fatty acids. Growth and tentacle development of juveniles fed on altered phytodetritus were reduced by 35% and 15% respectively, suggesting potential deficiencies in essential nutrients. In response to the lower quality of the phytodetritus, juveniles explored a wider area as they search for food, a strategy that could compensate for low food quality.     

A geochemical study of the impact of irrigation and aquifer lithology on groundwater in the Upper Yakima River Basin,Washington, USA

The Yakima River, a major tributary of the Columbia River, is currently overallocated in its surface water usage in part because of large agricultural water use. As a result, groundwater availability and surface water/groundwater interactions have become an important issue in this area. In several sub-basins, the Yakima River water is diverted and applied liberally to fields in the summer creating artificial recharge of shallow groundwater. Major ion, trace element, and stable isotope geochemistry of samples from 26 groundwater wells from a transect across the Yakima River and 24 surface waters in the Kittitas sub-basin were used to delineate waters with similar geochemical signatures and to identify surface water influence on groundwater. Major ion chemistry and stable isotope signatures combined with principal component analysis revealed four major hydrochemical groups. One of these groups, collected from shallow wells within the sedimentary basin fill, displays temporal variations in NO₃ and SO₄ along with high δ¹⁸O and δD values, indicating significant contribution from Yakima River and/or irrigation water. Two other major hydrochemical groups reflect interaction with the main aquifer lithologies in the basin: the Columbia River basalts (high-Na groundwaters), and the volcaniclastic rocks of the Ellensburg Formation (Ca–Mg–HCO₃ type waters). The fourth major group has interacted with the volcaniclastic rocks and is influenced to a lesser degree by surface waters. The geochemical groupings constrain a conceptual model for groundwater flow that includes movement of water between underlying Columbia River basalt and deeper sedimentary basin fill and seasonal input of irrigation water.     

An ichthyosaur (Reptilia: Ichthyosauria) specimen from the Lower Cretaceous (Berriasian) Spilsby Sandstone Formation of Nettleton,Lincolnshire, UK

A fragmentary ichthyosaur specimen collected in situ at Castle Top Quarry in Nettleton, Lincolnshire, UK from exposures of the Lower Cretaceous (Berriasian) Spilsby Sandstone Formation (Subcraspedites ?preplicomphalus Zone) is reported. In general, Early Cretaceous ichthyosaurs from the Berriasian to Barremian are poorly understood. Despite the fragmentary nature of the described specimen, it is the first ichthyosaur reported from this specific zone and adds to the literature another rare ichthyosaur from the Berriasian.     

Trace elements in magnetite as petrogenetic indicators

We have characterized the distribution of 25 trace elements in magnetite (Mg, Al, Si, P, Ca, Sc, Ti, V, Cr, Mn, Co, Ni, Cu, Zn, Ga, Ge, Y, Zr, Nb, Mo, Sn, Hf, Ta, W, and Pb), using laser ablation ICP-MS and electron microprobe, from a variety of magmatic and hydrothermal ore-forming environments and compared them with data from the literature. We propose a new multielement diagram, normalized to bulk continental crust, designed to emphasize the partitioning behavior of trace elements between magnetite, the melt/fluid, and co-crystallizing phases. The normalized pattern of magnetite reflects the composition of the melt/fluid, which in both magmatic and hydrothermal systems varies with temperature. Thus, it is possible to distinguish magnetite formed at different degrees of crystal fractionation in both silicate and sulfide melts. The crystallization of ilmenite or sulfide before magnetite is recorded as a marked depletion in Ti or Cu, respectively. The chemical signature of hydrothermal magnetite is distinct being depleted in elements that are relatively immobile during alteration and commonly enriched in elements that are highly incompatible into magnetite (e.g., Si and Ca). Magnetite formed from low-temperature fluids has the lowest overall abundance of trace elements due to their lower solubility. Chemical zonation of magnetite is rare but occurs in some hydrothermal deposits where laser mapping reveals oscillatory zoning, which records the changing conditions and composition of the fluid during magnetite growth. This new way of plotting all 25 trace elements on 1 diagram, normalized to bulk continental crust and elements in order of compatibility into magnetite, provides a tool to help understand the processes that control partitioning of a full suit of trace elements in magnetite and aid discrimination of magnetite formed in different environments. It has applications in both petrogenetic and provenance studies, such as in the exploration of ore deposits and in sedimentology.     

Local perceptions of glacial retreat and livelihood impacts in the At-Bashy Range of Kyrgyzstan

Glaciers are critical water reservoirs in Central Asia, and their retreat has been the subject of scientific inquiry and regional water policy discourse in recent years. In the case of Kyrgyzstan, the total glaciated area has decreased approximately 25–35 % over the past 100 years—a statistic that has raised serious national security and economic development concerns. Scant research has addressed the topic of deglaciation from the perspective of local populations living in close proximity to glaciers. This paper reports on an effort to document local perceptions of, and relationships to, glaciers in the unique physical and socio-cultural context of the At-Bashy Range of Kyrgyzstan’s Tien Shan Mountains. The analysis draws upon data collected over an 11 month period through interviews with Kyrgyz herders, focus group interviews with diverse community members, and extensive field observations and interactions in high-elevation pastures and sub-basins. The analysis suggests that interview participants are unanimous in recognizing the economic, cultural, and symbolic roles of glaciers and mountain environments in sustaining semi-nomadic, livestock-based livelihood systems. Nevertheless, wide ranging and often contradictory opinions emerged about glacial retreat-related vulnerabilities and impacts. Further, extant and pressing political, economic and institutional challenges influence and mediate the extent to which glacial retreat is perceived and assessed as a local priority.     

TOPO-EUROPE: The geoscience of coupled deep Earth-surface processes

TOPO-EUROPE addresses the 4-D topographic evolution of the orogens and intra-plate regions of Europe through a multidisciplinary approach linking geology, geophysics, geodesy and geotechnology. TOPO-EUROPE integrates monitoring, imaging, reconstruction and modelling of the interplay between processes controlling continental topography and related natural hazards. Until now, research on neotectonics and related topography development of orogens and intra-plate regions has received little attention. TOPO-EUROPE initiates a number of novel studies on the quantification of rates of vertical motions, related tectonically controlled river evolution and land subsidence in carefully selected natural laboratories in Europe. From orogen through platform to continental margin, these natural laboratories include the Alps/Carpathians–Pannonian Basin System, the West and Central European Platform, the Apennines–Aegean–Anatolian region, the Iberian Peninsula, the Scandinavian Continental Margin, the East-European Platform, and the Caucasus–Levant area. TOPO-EUROPE integrates European research facilities and know-how essential to advance the understanding of the role of topography in Environmental Earth System Dynamics. The principal objective of the network is twofold. Namely, to integrate national research programs into a common European network and, furthermore, to integrate activities among TOPO-EUROPE institutes and participants. Key objectives are to provide an interdisciplinary forum to share knowledge and information in the field of the neotectonic and topographic evolution of Europe, to promote and encourage multidisciplinary research on a truly European scale, to increase mobility of scientists and to train young scientists. This paper provides an overview of the state-of-the-art of continental topography research, and of the challenges to TOPO-EUROPE researchers in the targeted natural laboratories.     

Martian subsurface properties and crater formation processes inferred from fresh impact crater geometries

Abstract— The geometry of simple impact craters reflects the properties of the target materials, and the diverse range of fluidized morphologies observed in Martian ejecta blankets are controlled by the near‐surface composition and the climate at the time of impact. Using the Mars Orbiter Laser Altimeter (MOLA) data set, quantitative information about the strength of the upper crust and the dynamics of Martian ejecta blankets may be derived from crater geometry measurements. Here, we present the results from geometrical measurements of fresh craters 3–50 km in rim diameter in selected highland (Lunae and Solis Plana) and lowland (Acidalia, Isidis, and Utopia Planitiae) terrains. We find large, resolved differences between the geometrical properties of the freshest highland and lowland craters. Simple lowland craters are 1.5–2.0 times deeper (≥5s?_o difference) with >50% larger cavities (≥2s?_o) compared to highland craters of the same diameter. Rim heights and the volume of material above the preimpact surface are slightly greater in the lowlands over most of the size range studied. The different shapes of simple highland and lowland craters indicate that the upper ?6.5 km of the lowland study regions are significantly stronger than the upper crust of the highland plateaus. Lowland craters collapse to final volumes of 45–70% of their transient cavity volumes, while highland craters preserve only 25–50%. The effective yield strength of the upper crust in the lowland regions falls in the range of competent rock, approximately 9–12 MPa, and the highland plateaus may be weaker by a factor of 2 or more, consistent with heavily fractured Noachian layered deposits. The measured volumes of continuous ejecta blankets and uplifted surface materials exceed the predictions from standard crater scaling relationships and Maxwell's Z model of crater excavation by a factor of 3. The excess volume of fluidized ejecta blankets on Mars cannot be explained by concentration of ejecta through nonballistic emplacement processes and/or bulking. The observations require a modification of the scaling laws and are well fit using a scaling factor of ?1.4 between the transient crater surface diameter to the final crater rim diameter and excavation flow originating from one projectile diameter depth with Z = 2.7. The refined excavation model provides the first observationally constrained set of initial parameters for study of the formation of fluidized ejecta blankets on Mars.