A fine-granularity scheduling algorithm for parallel XDraw viewshed analysis

Viewshed analysis is widely used in many terrain applications such as siting problem, path planning problem, and etc. But viewshed computation is very time-consuming, in particular for applications with large-scale terrain data. Parallel computing as a mainstream technique with the tremendous potential has been introduced to enhance the computation performance of viewshed analysis. This paper presents a revised parallel viewshed computation approach based on the existing serial XDraw algorithm in a distributed parallel computing environment. A layered data-dependent model for processing data dependency in the XDraw algorithm is built to explore scheduling strategy so that a fine-granularity scheduling strategy on the process-level and thread-level parallel computing model can be accepted to improve the efficiency of the viewshed computation. And a parallel computing algorithm, XDraw-L, is designed and implemented taken into account this scheduling strategy. The experimental results demonstrate a distinct improvement of computation performance of the XDraw-L algorithm in this paper compared with the coarse-partition algorithm, like XDraw-E which is presented by Song et al. (Earth Sci Inf 10(5):511–523, 2016), and XDraw-B that is the basic algorithm of serial XDraw. Our fine-granularity scheduling algorithm can greatly improve the scheduling performance of the grid cells between the layers within a triangle region.     

Position-domain integrity risk-based ambiguity validation for the integer bootstrap estimator

Integrity monitoring for ambiguity resolution is of significance for utilizing the high-precision carrier phase differential positioning for safety–critical navigational applications. The integer bootstrap estimator can provide an analytical probability density function, which enables the precise evaluation of the integrity risk for ambiguity validation. In order to monitor the effect of unknown ambiguity bias on the integer bootstrap estimator, the position-domain integrity risk of the integer bootstrapped baseline is evaluated under the complete failure modes by using the worst-case protection principle. Furthermore, a partial ambiguity resolution method is developed in order to satisfy the predefined integrity risk requirement. Static and kinematic experiments are carried out to test the proposed method by comparing with the traditional ratio test method and the protection level-based method. The static experimental result has shown that the proposed method can achieve a significant global availability improvement by 51% at most. The kinematic result reveals that the proposed method obtains the best balance between the positioning accuracy and the continuity performance.     

The extension of the parametrization of the radio source coordinates in geodetic VLBI and its impact on the time series analysis

The radio sources within the most recent celestial reference frame (CRF) catalog ICRF2 are represented by a single, time-invariant coordinate pair. The datum sources were chosen mainly according to certain statistical properties of their position time series. Yet, such statistics are not applicable unconditionally, and also ambiguous. However, ignoring systematics in the source positions of the datum sources inevitably leads to a degradation of the quality of the frame and, therefore, also of the derived quantities such as the Earth orientation parameters. One possible approach to overcome these deficiencies is to extend the parametrization of the source positions, similarly to what is done for the station positions. We decided to use the multivariate adaptive regression splines algorithm to parametrize the source coordinates. It allows a great deal of automation, by combining recursive partitioning and spline fitting in an optimal way. The algorithm finds the ideal knot positions for the splines and, thus, the best number of polynomial pieces to fit the data autonomously. With that we can correct the ICRF2 a priori coordinates for our analysis and eliminate the systematics in the position estimates. This allows us to introduce also special handling sources into the datum definition, leading to on average 30 % more sources in the datum. We find that not only the CPO can be improved by more than 10 % due to the improved geometry, but also the station positions, especially in the early years of VLBI, can benefit greatly.     

Sandbank occurrence on the Dutch continental shelf in the North Sea

Sandbanks, the largest of bed patterns in shallow sandy seas, pose a potential risk to shipping. They are also valuable elements of natural coastal protection, dissipating the energy of waves. In the Southern Bight of the North Sea, several sandbank areas have been reported in the literature. However, based on an objective crest–trough analysis of the bathymetry of the Dutch continental shelf, the present study shows that sandbanks are more widespread than commonly considered. These banks are relatively low, presumably explaining why they have not been documented before. This widespread occurrence of sandbanks in the North Sea is in agreement with theoretical predictions based on stability analysis techniques. The possible interference between large-scale human activity and low-amplitude open-shelf ridges implies that one should be careful not to overlook these patterns if none should appear in a preliminary (visual) assessment. The only part of the Southern Bight in which no ridges can be seen is a circular area with a diameter of about 50 km near the mouth of the river Rhine. Here, freshwater outflow affects the direction of tidal ellipses and residual flow, and suppresses the formation of open ridges.     

Molecular ecological study of <Emphasis Type="Italic">Siganus spinus</Emphasis> and <Emphasis Type="Italic">S. guttatus</Emphasis> from Okinawan waters based on mitochondrial DNA control region sequences

The mitochondrial DNA (mtDNA) control region was sequenced to examine the genetic variability and gene flow of juvenile Siganus spinus and S. guttatus. In total, 461 nucleotide sequences were obtained from 69 specimens of juvenile S. spinus from Okinawa Island and Ishigaki Island, in which 17 variable sites and 22 haplotypes were identified. Haplotype diversity (h) was high (0.9244 in Okinawa and 0.8984 in Ishigaki), whereas nucleotide diversity (π) was low (0.0063 in Okinawa and 0.0059 in Ishigaki). The two populations were not genetically distinct. Siganus guttatus, which do not form large schools at recruitment, in contrast S. spinus, were also analyzed by studying 152 individuals collected off Okinawa Island, Miyako Island, and Ishigaki Island. Of 476 nucleotide sequences, 50 were variable, and 42 haplotypes were identified. Genetic variability values were high (h = 0.8766 and π = 0.0151 in Okinawa; h = 0.9640 and π = 0.0192 in Miyako; h = 0.9161 and π = 0.0199 in Ishigaki). The Okinawa population was genetically isolated from the Miyako and Ishigaki populations. As a result, genetic diversity was high for each of these siganid populations despite their being target species for fisheries; however, the degree of inter-population gene flow was higher for S. spinus than S. guttatus, suggesting that these species exhibit different dispersal strategies.     

Late quaternary seismic stratigraphy and active faults of the Gulf of İzmit (NE Marmara Sea)

The Upper Quaternary seismic stratigraphy and active faults of the Gulf of İzmit were investigated by means of high-resolution shallow seismic profiling data in the source region of 1999 İzmit earthquake. High-resolution seismic reflection data correlated with borehole data indicate that the stratigraphy of İzmit Bay consists of three distinct depositional sequences formed in response to middle Pleistocene-Holocene sea-level changes. Reflector R, separating the pre-Holocene sequences (1 and 2) from the Holocene sequence (3), represents an erosional unconformity produced by the subaerial fluvial erosion of the continental shelves at the time of the last glacial maximum. Occasional, anomalous reflections (acoustic turbidity) observed within the Holocene sequence are interpreted as gas accumulations. The maximum thickness of the Holocene sediments is found to be about 25 m. The isopach map of Holocene sediment implies that the thickness of the Holocene decreases from the east towards the central and western basins of İzmit Bay. Two distinct fault systems are interpreted in İzmit Bay. The main fault system extending roughly in an E-W direction along the Gulf of İzmit is an active right lateral strike slip fault with a normal component. The secondary faults are normal faults striking in different directions and these are identified as being both active and inactive. In addition, prominent compressive features are identified in the seismic cross-sections of some profiles acquired to the east of Hersek Peninsula where the focal mechanisms of the aftershocks of the 1999 İzmit earthquake also reveal predominantly reverse faulting mechanisms, as identified by a local dense seismic network.     

Discrimination of spurious self-correlation in nondimensionalized analyses of fluid dynamical data

Nondimensionalization of variables enables us to treat experiment data much more simply and efficiently by decreasing the number of variables. In some cases, trivial conclusions (which Kenney, 1982, called spurious self-correlation) result from a formal application of dimensional analyses. In contrast, in some cases fully significant conclusions can be derived. We first discuss how to construct nondimensional variables retaining the physical meanings of variables. We then propose simple and efficient methods, especially the use of “spurious triangle (SpT)”, to discriminate between significant conclusions and spurious self-correlations in the analysis of nondimensionalized variables.     

Seasonal variations of the surface currents in the Tsushima Strait

Seasonal variations of the surface currents in the Tsushima Strait were investigated by analyzing the monthly mean surface currents measured with HF radar. Several new features of the surface currents have been found. One notable feature is the large, complicated seasonal variation in the current structure in the eastern channel of the strait. For example, in the southeastern and northwestern regions of the channel, southwestward countercurrents are found in summer while southeastward acrossshore currents are found in autumn and winter. The wind-driven flow (Ekman flow) as well as surface geostrophic currents are responsible for these complicated variations of the surface currents. To quantify each variation of the flow and current, the wind-driven flow was calculated from the monthly wind (more precisely, the friction velocity) using the monthly speed factor and deflection angle estimated in our previous study, and the surface geostrophic currents were then estimated by subtracting the wind-driven flow from the measured surface currents. It was found that the acrossshore currents are the wind-driven flow, and that the surface geostrophic currents flow almost in the along-shore direction, indicating the validity of the decomposition of the surface velocity into the wind-driven flow and the geostrophic currents using the speed factor and deflection angle. A real-vector empirical orthogonal function (EOF) analysis of the surface geostrophic currents shows a pair of eddies in the lee of Tsushima and Iki Islands as the first mode, which indicates that the southwestward countercurrents in the eastern channel are formed primarily by the incoming Tsushima Warm Current.     

Distribution of deep near-inertial waves observed in the Kuroshio Extension

The distribution of deep near-inertial waves (NIWs) is investigated using data mainly from an array of 46 near-bottom acoustic current meter sensors spanning a 600 km × 600 km region as part of the Kuroshio Extension System Study during 2004–2006. The deep NIW distribution is interpreted in the context of both upper-layer and near-bottom mapped circulations. The wintertime-mean mixed-layer NIW energy input, modeled from observed wind stress, has the same range of values north and south of the Kuroshio Extension in this region. Yet, the wintertime-mean deep NIW energy distribution reveals a sharp factor-of-5 decrease from north to south of the Kuroshio jet. This direct observational evidence shows that the Kuroshio Extension blocks the equatorward propagation of NIWs. The NIW energy that does reach the sea floor within the subset of wintertime observations in the subtropical gyre arrives with patchy spatial and temporal distribution. Elevated NIW energy in deep water is associated with anticyclones in the deep barotropic flow and unassociated with upper layer eddies.     

Benthic habitat quality change as measured by macroinfauna community in a tidal flat on the west coast of Korea

Yellow Sea tidal flats are internationally recognised for their contribution to biological diversity and yet are under enormous pressure from reclamation, pollution and overexploitation. The benthic macroinfauna community is the dominant community on these tidal flats and a reliable indicator of benthic environmental changes. We surveyed the current benthic macroinfauna community of the Ganghwa Southern Tidal Flat, the largest remaining Korean mud flat in the Yellow Sea, in order to examine changes in the environmental situation of this benthic ecosystem. The results show a significant decline in species diversity from the last survey made in 2003, and a shift in species composition with appearances of polychaetes indicative of pollution and physical disturbances and other opportunistic species becoming dominant in both density and biomass. The benthic community shift observed during the two study periods may be associated with increased nutrient pollution as well as increased physical disturbances in this area. However, we recognise the limitations of the data both in frequency and scope but believe the significant changes to the composition of the benthic fauna are sufficient to warrant concern. Observations are required to examine the extent to which these human activities induce benthic community shift in this tidal flat.