Simulations of Annual Cycle of Phytoplankton Production and the Utilization of Nitrogen in the Yellow Sea

A nutrient dynamic model coupled with a 3D physical model has been developed to study the annual cycle of phytoplankton production in the Yellow Sea. The biological model involves interactions between inorganic nitrogen (nitrate and ammonium), phosphate and phytoplankton biomass. The model successfully reproduces the main features of phytoplankton-nutrient variation and dynamics of production. 1. The well-mixed coastal water is characterized by high primary production, as well as high new production. 2. In summer, the convergence of tidal front is an important hydrodynamic process, which contributes to high biomass at frontal areas. 3. The evolution of phytoplankton blooms and thermocline in the central region demonstrate that mixing is a dominant factor to the production in the Yellow Sea. In this simulation, nitrate- and ammonium-based productions are estimated regionally and temporally. The northern Yellow Sea is one of the highly ranked regions in the Yellow Sea for the capability of fixing carbon and nitrogen. The annual averaged f-ratio of 0.37 indicates that regenerated production prevails over the Yellow Sea. The result also shows that phosphate is the major nutrient, limiting phytoplankton growth throughout the year and it can be an indicator to predict the bloom magnitude. Finally, the relative roles of external nutrient sources have been evaluated, and benthic fluxes might play a significant role in compensating 54.6% of new nitrogen for new production consumption.     

Total Lipid and Fatty Acid Classes in Decomposing Mangrove Leaves of <Emphasis Type="Italic">Bruguiera gymnorrhiza</Emphasis> and <Emphasis Type="Italic">Kandelia candel</Emphasis>: Significance with respect to Lipid Input

Changes in the concentration of total lipid and fatty acids (FAs) during the decomposition of mangrove leaves were investigated by field experiments using yellow leaves of Bruguiera gymnorrhiza (L.) Lamk. and Kandelia candel (L.) Druce, in order to quantify mangrove contribution to lipid and fatty acid inputs to marine sediments. Total lipid and total FA in the fresh (green and yellow) and decomposing leaves of both species were significantly higher during winter than summer. During decomposition, total lipid content and FA concentration, in particular branched chain fatty acids (BrFAs) and bacterial fatty acids (BFAs), increased to a maximum concentration in 45 days during winter and in 17 days during summer. Lipids were lost faster in K. candel leaf detritus than in B. gymnorrhiza leaf detritus in which >90% of the total lipid original weight was lost during the summer experiment and <60% during the winter experiment. The changes in the concentrations of total lipids and FAs in the decomposing leaves also indicate that mangrove leaves are significant sources of fatty acids and probably other lipid compounds to estuarine ecosystems and that tidal waters transport the lipids and FAs adsorbed to particulate matter from mangroves to adjacent estuarine sediments and the ocean.     

Long-term Sensor Drift Found in Recovered Argo Profiling Floats

We recovered three Argo profiling floats after 2 to 2.5 years of operation, and recalibrated their temperature, conductivity, and pressure sensors. The results demonstrate that these floats exhibited a significant drift in salinity of −0.0074 to −0.0125, primarily due to the conductivity sensor drift. Combined with the recalibration result for another previously recovered float, the indication is that the negative salinity drift increases nearly in proportion to the operating period of floats. The increasing rate is −0.0041 (±0.0015) year⁻¹, which yields a salinity drift of −0.016 (±0.006) for the expected float lifetime of four years. The present result suggests that reducing the float surfacing time would improve the accuracy of the salinity measurements.     

Seasonal and Spatial Variations of Total Mass Flux around Coral Reefs in the Southern Ryukyus,Japan

Total mass flux, size distribution of sediment particles and some chemical components such as total carbon (TC), total nitrogen (TN) and calcium carbonate (CaCO₃) were monitored monthly using a multi-cup sediment traps at seven coral reef sites (6 reef flat and 1 reef slope) of the Marine Protected Areas around Ishigaki, Kohama, Kuroshima and Iriomote Islands in the southern Ryukyus, Japan from September 2000 to September 2001. The size distribution of trapped sediments revealed mostly uni-modal fine sand to mud in the reef flat and gravelly to coarse sand in the reef slope. The total mass flux ranged between 0.54 to 872 gm⁻²d⁻¹, and showed a pronounced seasonality (high in summer-autumn and low in spring) at each site, which was consistent with the rainfall and typhoon regime. Exceptionally high values were observed on the reef slope (Iriomote) in February–March 2001 (1533 gm⁻²d⁻¹) owing to a large amount of bottom sediment re-suspension. On the reef flat (Todoroki South and North; Ishigaki), values obtained in July–August 2001 (872 gm⁻²d⁻¹) and August–September 2001 (800 gm^{− 2}d⁻¹) indicate the high terrestrial discharge from Todoroki River. Trapped sediment particles consist of CaCO₃ (1.2–27.1%) and a non-carbonate fraction (98.8–72.9%), which contains total carbon (4.9–26%), carbonate carbon (CO₂-C) (0.2–3.1%) and non-carbonate carbon (NC-C) (7.9–25.6%). Total nitrogen content was in the range 0.02–0.48%. TN is contained mainly in the carbonate fraction and NC-C may be contained in the non-carbonate fraction. The low TN/OC ratio of the trapped sediments suggests that they were mostly of terrestrial origin and that both fractions migrated. The high total mass flux derived from Todoroki River exceeded the threshold at which a lethal effect on coral community is caused. The results stress the importance of conducting seasonal studies of sedimentation over more than one year and at more than one location in south Japan coral reef ecosystems to gain an understanding of the processes controlling the total mass fluxes and their nutrients content, also to develop an awareness of how to prevent the damage of coral reef ecosystems and, if it does occur, to allow mitigation measures to be undertaken.     

Influence of Current Width Variation on the Annual Mean Transport of the East Sakhalin Current: A Simple Model

Recent observations suggest that the annual mean southward transport of the East Sakhalin Current (ESC) is significantly larger than the annual mean Sverdrup transport. Motivated by this observational result, transport of a western boundary current has been investigated using a simple numerical model with a western slope. This transport is defined as the instantaneous barotropic transport integrated from the western boundary to the offshore point where the barotropic velocity vanishes. The model, forced by seasonally varying wind stress, exhibits an annual mean of the western boundary current transport that is larger than that of the Sverdrup transport, as observed. The southward transport from October to March in the model nearly equals the instantaneous Sverdrup transport, while the southward transport from April to September decreases slowly. Although the Sverdrup transport in July vanishes, the southward transport in summer nearly maintains the annual mean Sverdrup transport, because the barotropic Rossby wave cannot intrude on the western slope. This summer transport causes the larger annual mean. Although there are some uncertainties in the estimation of the Sverdrup transport in the Sea of Okhotsk, the seasonal variation of the southward transport in the model is qualitatively similar to the observations.     

Diel Patterns in Chlorophyll <Emphasis Type="Italic">a</Emphasis> Specific Absorption Coefficient and Absorption Efficiency Factor of Picoplankton

Diel patterns in the chlorophyll a specific absorption coefficient of surface picoplankton, a*_pico (γ) (m²·[mg chlorophyll a]⁻¹), were studied at 7 stations under daily cycle of in situ light condition in the western subarctic Pacific and Japan Sea. All the data were normalized by dividing the anomaly with daily averaged a*_pico (γ). Opposite diel patterns were observed for the normalized a*_pico (443) and a*_pico (675) with maximum toward dawn or dusk and minimum toward midday at 4 stations under low-irradiance (LI) conditions and vice versa at 3 stations under high-irradiance (HI) conditions. The absorption efficiency factors at red absorption peak, Q _a (675), were determined by reconstruction with intracellular chlorophyll a concentration and cell diameter. The normalized Q _a (675) also showed diel pattern with maximum toward midday and minimum toward dawn or dusk under LI. The diel pattern in a*_pico (675) and Q _a (675) were primarily caused by changes in intracellular chlorophyll a concentration due to photoadaptation under LI. The diel pattern in a*_pico (443) was influenced by pigmentation, as recognized by blue to red ratio [a*_pico (443)/a*_pico (675)] under HI. This study proposed that the opposite diel pattern in a*_pico (γ) might occur for a wide range of algal species. The results presented here have important consequences for the interpretation of diel variations in optical properties observed in the open ocean.     

Size-Fractionated Primary Production Estimated by a Two-Phytoplankton Community Model Applicable to Ocean Color Remote Sensing

In order to estimate primary production from ocean color satellite data using the Vertical Generalized Production Model (VGPM; Behrenfeld and Falkowski, 1997), we propose a two-phytoplankton community model. This model is based on the two assumptions that changes in chlorophyll concentration result from changes of large-sized phytoplankton abundance, and chlorophyll specific productivity of phytoplankton tends to be inversely proportional to phytoplankton size. Based on the analysis of primary production data, P _opt ^B , which was one parameter in the VGPM, was modeled as a function of sea surface temperature and sea surface chlorophyll concentration. The two-phytoplankton community model incorporated into the VGPM gave good estimates in a relatively high productive area. Size-fractionated primary production was estimated by the two-phytoplankton community model, and P _opt ^B of small-sized phytoplankton was 4.5 times that of large-sized phytoplankton. This result fell into the ranges observed during field studies.     

Scattering of Semidiurnal Internal Kelvin Wave at Step Bottom Topography

A three-dimensional, multi-level model was used to study the energy dissipation of semidiurnal internal Kelvin waves due to their interaction with bottom topography. A simplified topography consisting of a channel with an additional shallow bay was used to clarify the wave’s scattering process. When the first mode semidiurnal internal wave given at an open boundary arrives at the bay mouth, higher-mode internal waves are generated at a step bottom of the bay mouth. As a result, the energy of the first mode internal Kelvin wave is effectively decayed. The decay rate of the internal Kelvin wave depends on both the width and length of the additional bay. The maximum decay rate was found when a resonance condition occurs the bay, that is, the bay length is equal to a quarter of wave length of the first mode internal wave on the shallow region. The decay rate in the wide bay cases is higher than that in a narrow case, due to a contribution from the scattering due to the Poincare wave that emanates from the corners of the bay head. The decay rate with the additional bay is 1.1–1.8 times that of the case without the additional bay. The decay rate due to the scattering process is found to be of the same order as that of the internal and bottom friction.     

Possible Density Change of the Origin of North Pacific Intermediate Water Due to Double Diffusion in the Mixed Water Region

In this study we test Talley's hypothesis that Oyashio winter mixed-layer water (26.5–26.6σ _θ) increases its density to produce the North Pacific Intermediate Water (NPIW) salinity minimum (26.7– 26.8σ_θ) in the Mixed Water Region, assuming a combination of cabbeling and double diffusion. The possible density change of Oyashio winter mixed-layer water is discussed using an instantaneous ratio of the change of temperature and salinity along any particular intrusion (R _l ). We estimate the range of R _l ^DD required to convert Oyashio winter mixed-layer water to the NPIW salinity minimum due to double diffusion, and then assume double-diffusive intrusions as this conversion mechanism. A double-diffusive intrusion model is used to estimate R _l ^DD in a situation where salt fingering dominates vertical mixing, as well as to determine whether Oyashio winter mixed-layer water can become the NPIW salinity minimum. Possible density changes are estimated from the model R _l ^DD by assuming the amount of density change due to cabbeling. From these results, we conclude that Oyashio winter mixed-layer water contributes to a freshening of the lighter layer of the NPIW salinity minimum (around 26.70σ_θ) in the MWR.     

Hydrodynamic characteristics of the western Doñana Region (area of El Abalario), Huelva,Spain

The Doñana region, in southwestern Spain, comprises a large and important nature reserve, the wetlands of which are affected by human activity. Planting of an extensive eucalyptus forest in the 1950s and, more recently, the use of aquifers for irrigation and water supply for some coastal tourist resorts, have altered the natural groundwater-flow system. The area of the study is the western sector of the region, called El Abalario, which is a gentle topographic elevation between the Atlantic coast and La Rocina Creek (Arroyo de la Rocina). Underneath a variable layer of eolian sands with high dunes near the coast, thick Plio-Quaternary detritic strata, mostly fine silica sands, overlie marls. Near the base there is a variable, deltaic-origin layer of coarse sands and gravels. The dome-shaped water table, inside the sands, is close to the surface everywhere except beneath the dune belt, and small, temporary, shallow lagoons are numerous. The coarse sand and gravel layer conditions groundwater flow and behaves as a semiconfined layer between sands. A cross section through the area was simulated with a model to check the validity of the conceptual groundwater-flow pattern and its sensitivity to the hydraulic parameters. The model was calibrated using parameter values obtained by pumping tests and multilevel piezometric data, and checked against the estimated groundwater discharge into La Rocina Creek. Groundwater flows peripherally to the sea coast, to La Rocina Creek, or directly east and southeastward into the Doñana marshlands, in the Guadalquivir River delta. The average net aquifer recharge rate was calculated to be between 100 and 200 mm year^–1 for the area covered by brush, but is remarkably lower in the areas of eucalyptus trees. The transient-state model shows that recharge varies spatially and is not clearly proportional to annual precipitation. Phreatic evapotranspiration plays an important role in decreasing the net value of aquifer recharge to approximately 0.4–0.6 of that calculated with a soil-balance model. The cross section model was used to study the effect of groundwater abstraction on water-table depth by subtracting the contribution of vertical flow, calculated by a well-hydraulics formula, to the semiconfined deep aquifer. The result was a decrease in phreatic evapotranspiration, flow into La Rocina Creek, and lagoon-inundation frequency. Replacement of the eucalyptus forest with native vegetation may raise water-table levels and even reactivate old tributaries to La Rocina Creek.

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Resumen La región de Doñana, situada en el sudoeste de España, incluye una gran e importante reserva natural, cuyos humedales están siendo afectados por la actividad humana. La extensa plantación de eucaliptus en la década de 1950 y el uso más reciente de los acuíferos para riego y para abastecimiento de centros turísticos costeros han modificado el sistema de flujo del agua subterránea en esta zona. Este estudio se ha realizado en el sector occidental, llamado El Abalario. Se trata de una elevación suave situada entre el océano Atlántico y el arroyo de La Rocina. Debajo de un manto variable de arenas eólicas, que forma un alto cordón dunar costero, se encuentran sedimentos detríticos plio-cuaternarios formados por arenas silíceas finas, que hacia la base incluyen una capa de arenas gruesas y gravas de origen deltrico, los que a su vez yacen sobre margas. El flujo de agua subterránea está relacionado con niveles de gravas y gravillas semiconfinadas por las arenas fluvio-marinas que contienen el nivel freático. El nivel freático es somero excepto debajo del cordón dunar. Son frecuentes pequeñas lagunas temporales. Se ha simulado el flujo de agua subterránea en una sección para comprobar el modelo de flujo conceptual y la sensibilidad a variaciones de los parámetros. El modelo fue calibrado usando los valores de los parámetros hidráulicos obtenidos en ensayos de bombeo y datos piezométricos medidos a diferentes profundidades, y la descarga estimada al arroyo de La Rocina. La recarga de agua subterránea drena lateralmente, por un lado hacia la costa y por otro lado a través del arroyo de La Rocina, o directamente hacia las Marismas de Doñana situadas en el delta del río Guadalquivir. Con una lluvia media anual entre 550 y 600 mm, la recarga neta media estacionaria anual del acuífero, considerando periodos de tiempo largos, se estima entre 100 y 200 mm en las zonas de vegetación autóctona, y es notablemente menor en las zonas de plantación de eucaliptos. El modelo transitorio indica que la recarga varia espacialmente y no es claramente proporcional a la precipitación para periodos de un año. La evapotranspiración freática varia espacialmente y juega un papel importante; disminuye el valor neto de la recarga al acuífero para dejarlo en 0,4 a 0,6 de lo que se calcula mediante un balance de agua en el suelo. La sección modelada sirve para estudiar el efecto de la extracción de agua subterránea sobre la profundidad del nivel freático mediante la substracción del flujo vertical, que se calcula mediante una fórmula de hidráulica de pozos para el acuífero semiconfinado profundo. El resultado es una disminución de la evapotranspiración freática, del flujo al arroyo de la Rocina y de la frecuencia de inundación de las lagunas. La substitución del bosque de eucaliptus por vegetación nativa puede elevar los niveles freáticos e incluso reactivar antiguos "caños" tributarios al arroyo de La Rocina.

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Résumé La région de Doñana, située dans le sud ouest de l'Espagne, comprend une importante réserve naturelle avec des zones humides, affectée par l'activité humaine. L'exploitation de vastes plantations d'eucalyptus pendant les années 50 et l'usage plus récent des nappes souterraines pour l'irrigation et l'alimentation en eau des centres touristiques côtiers ont modifié le système de flux d'eau souterraine dans cette zone. La présente étude a été réalisée dans le secteur occidental, appelé El Abalario. Ce secteur consiste en une légère élévation située entre l'Océan Atlantique et la ravine de La Rocina. Une couverture variable de sables éoliens, formant une haute crête dunaire côtière, recouvre des sédiments detritiques plio-quaternaires, déposés eux même sur des sables siliceux lesquels reposent à leur tour sur des marnes. Près de la base se trouvent des sables grossiers et des graviers d'origine deltaïque, dont l'épaisseur varie spatialement. Le flux d'eau souterraine est conditionné par l'aquifère semi confinés des graviers et des sables grossiers. Le niveau phréatique de l'aquifère libre des sables fluvio-marins est peu profond, excepté sous les dunes. On y trouve souvent des petites lagunes temporaires peu profondes. Le flux de l'eau souterraine a été simulé dans une section verticale pour vérifier le modèle hydrogéologique conceptuel et la sensibilité aux variations des paramètres. Le modèle a été calé en utilisant d'une part les valeurs des paramètres hydrauliques obtenus par des essais de pompage et d'après les données piezométriques mesurées à différentes profondeurs, et d'autre part l'apport estimé de la ravine de La Rocina. L'écoulement d'eau souterraine s'effectue par drainage latérale dans trois directions, d'une part vers la côte, d'autre part à travers la ravine de La Rocina et finalement directement vers les Marais de Doñana situés à l'est et sud-est dans le delta du fleuve Guadalquivir. Avec une pluviométrie moyenne comprise entre 550 et 600 mm, la recharge nette moyenne annuelle des nappes, pour des périodes de temps assez longues, est estimée entre 100 et 200 mm dans les aires de végétation autochtone, et elle est nettement inférieure dans les aires plantées d´eucalyptus. Le modèle transitoire montre que la recharge varie dans l'espace et qu'elle n'est pas clairement proportionnelle aux précipitations annuelles. L'évapotranspiration phréatique joue un rôle important et diminue la valeur nette de la recharge des nappes de 0,4 à 0,6 de la valeur calculée avec un modèle de bilan d'eau dans le sol. La section modélisée est utilisée pour étudier l'effet de l'extraction d'eau souterraine sur la profondeur du niveau phréatique en soustrayant le flux vertical, calculé grâce à une formule d'hydraulique des puits, de la nappe profonde semi-confinée. Le résultat de cette extraction est une diminution de l'évapotranspiration phréatique, du flux au niveau de la ravine de La Rocina et de la fréquence d'inondation des lagunes. La substitution de forêts d'eucalyptus par de la végétation autochtone peut permettre la remonté des niveaux phréatiques et même réactiver d'anciens ravins affluents à La Rocina.