Diatom-based inference models and reconstructions revisited: methods and transformations

Different calibration methods and data manipulations are being employed for quantitative paleoenvironmental reconstructions, but are rarely compared using the same data. Here, we compare several diatom-based models [weighted averaging (WA), weighted averaging with tolerance-downweighting (WAT), weighted averaging partial least squares, artificial neural networks (ANN) and Gaussian logit regression (GLR)] in different situations of data manipulation. We tested whether log-transformation of environmental gradients and square-root transformation of species data improved the predictive abilities and the reconstruction capabilities of the different calibration methods and discussed them in regard to species response models along environmental gradients. Using a calibration data set from New England, we showed that all methods adequately modelled the variables pH, alkalinity and total phosphorus (TP), as indicated by similar root mean square errors of prediction. However, WAT had lower performance statistics than simple WA and showed some unusual values in reconstruction, but setting a minimum tolerance for the modern species, such as available in the new computer program C² version 1.4, resolved these problems. Validation with the instrumental record from Walden Pond (Massachusetts, USA) showed that WA and WAT reconstructed most closely pH and that GLR reconstructions showed the best agreement with measured alkalinity, whereas ANN and GLR models were superior in reconstructing the secondary gradient variable TP. Log-transformation of environmental gradients improved model performance for alkalinity, but not much for TP. While square-root transformation of species data improved the performance of the ANN models, they did not affect the WA models. Untransformed species data resulted in better accordance of the TP inferences with the instrumental record using WA, indicating that, in some cases, ecological information encoded in the modern and fossil species data might be lost by square-root transformation. Thus it may be useful to consider different species data transformations for different environmental reconstructions. This study showed that the tested methods are equally suitable for the reconstruction of parameters that mainly control the diatom assemblages, but that ANN and GLR may be superior in modelling a secondary gradient variable. For example, ANN and GLR may be advantageous for modelling lake nutrient levels in North America, where TP gradients are relatively short.     

Synthetic design hydrographs for ungauged catchments: a comparison of regionalization methods

Design flood estimates for a given return period are required in both gauged and ungauged catchments for hydraulic design and risk assessments. Contrary to classical design estimates, synthetic design hydrographs provide not only information on the peak magnitude of events but also on the corresponding hydrograph volumes together with the hydrograph shapes. In this study, we tested different regionalization approaches to transfer parameters of synthetic design hydrographs from gauged to ungauged catchments. These approaches include classical regionalization methods such as linear regression techniques, spatial methods, and methods based on the formation of homogeneous regions. In addition to these classical approaches, we tested nonlinear regression models not commonly used in hydrological regionalization studies, such as random forest, bagging, and boosting. We found that parameters related to the magnitude of the design event can be regionalized well using both linear and nonlinear regression techniques using catchment area, length of the main channel, maximum precipitation intensity, and relief energy as explanatory variables. The hydrograph shape, however, was found to be more difficult to regionalize due to its high variability within a catchment. Such variability might be better represented by looking at flood-type specific synthetic design hydrographs.     

Biomass composition and methods for the determination of metabolic reserve polymers in phototrophic sulfur bacteria

To study nutrient fluxes within aquatic ecosystems, the synthesis of biomass and of various storage polymers has been analysed in samples from a meromictic alpine lake. Methods are described for the quantitative determination of whole cell biomass, glycogen, polyhydroxyalkanoates (PHA) and sulfur. Methods were adapted to conditions present in natural environments and tested with samples from blooms of Chromatiaceae and with corresponding laboratory cultures. Dried bacterioplankton-biomass has been analyzed for sulfur, glycogen and polyhydroxyalkanoates, and after complete oxidation for SO ₄ ^2- , NO ₃ ^- and HPO ₄ ^2- . The average elemental composition of biomass from phototrophic sulfur bacteria, depleted of sulfur and carbon storage compounds, was C₃₈₀H₅₈₀O₁₅₃N₆₇P₃S_2.5M, where M stands for the content of the remaining minor elements. C, H, O, N, P and S accounted for 86.7% of the total dry mass. Storage sulfur in natural populations was equivalent to 2.5% to 13.5% of the dry mass; its content varied by 80% within a diurnal cycle. Glycogen contents fluctuated by approximately 50%; they accounted for 7.5% to 15.2% of the dry cell mass. The total content of reserve materials per cell never exceeded 30% of the dry mass. PHA had not been found in appreciable amounts in cells harvested from the natural lake habitat. Under certain conditions in the laboratoryChromatium okenii could be induced, however, to produce polyhydroxyalkanoates. Sulfur, glycogen and PHA contents of 33, 26 and 11%, respectively, were achieved under laboratory-culture conditions. Cells with up to 60% of their dry mass consisting of reserve materials can be obtained under selected laboratory conditions.     

Seismic activity in the region of northwest bohemia

Summary The seismic activity of the region is analysed on the basis of the recent microseismic and former macroseismic observations. Only microearthquakes in the narrow magnitude range of 0–1.2 were monitored during 1982–1988. The mean annual frequencies are of the same order as the figures extrapolated from the magnitude-frequency relationship obtained for earthquakes in the magnitude range 2.4–4.5 which occurred in the region before 1910. The recent stress release is very low but its annual average of 7 × 10 ³ J ^1/2 is close to the annual average of 23×10 ³ J ^1/2 of long-term macroseismic observations.     

Immune deficiency causes annual late summer brown trout (Salmo trutta) mortality in Austrian prealpine river systems

For several years, severe brown trout (Salmo trutta) mortality has been observed in different prealpine river systems of Austria, Southern Germany, and Switzerland during late summer and early autumn. Often, the skin of the effected fish shows a medium to intense black pigmentation, and therefore this phenomenon is called “Schwarze Bachforelle Phänomen” or “proliferative darkening syndrom”. The present study was conducted to gain insight about its presence. From middle of May to end of August, brown trout and rainbow trout were kept in experimental tanks supplied with water from an effected river system. In brown trout, samples for blood diagnostics and histological investigations were taken after 0, 47, 62, and 77 days, and in rainbow trout after 0 and 107 days. Brown trout from a wild population were investigated for comparative purposes. Brown trout showed no abnormalities till the end of June. All fish sampled in the second half of July suffered from severe immune deficiency as the numbers of peripheral blood granulocytes and lymphocytes, plasma lysozyme activity, and plasma immunoglobulin levels significantly decreased. During August, the number of erythrocytes decreased and the osmotic fragility of the erythrocytes increased. Senescent erythrocytes became more frequent and the hematopoietic tissue of spleen and kidney enlarged. Also, the cellular composition of the spleen changed as the number of hemoblasts and normal erythroblasts decreased while the number of atypical erythroblasts increased. In the pronephros and hematopoietic tissue of the mesonephros, aggregation of macrophages and tissue disintegration was frequently observed. This was similar for brown trout from the field experiment and from the wild population. High mortality occurred in the end of July and during August. Death of the fishes might have been caused by secondary infections with microorganisms. Almost similar changes were observed in rainbow trout, however, the mortality was lower.     

Raman study of apatite amorphised with swift heavy ions under various irradiation conditions

Crystallographically oriented Durango fluorapatites were exposed to swift heavy ions (Xe, Ta, Au, U) at different irradiation conditions. Beam-induced sample modifications were investigated with respect to the effect of fluence (10⁹–10¹³ ions/cm²), electronic energy loss (18–27 keV/nm), and pressure (3.6–11.5 GPa) applied during irradiation. In situ high-pressure irradiation was performed in diamond anvil cells. Confocal Raman spectroscopy was used to trace the occurring changes in the crystal lattice. Fragmentation of the crystal specimen depends on the orientation and sample thickness and was found to scale with energy loss and fluence. The radiation damage for irradiation along the c-axis was found to be larger than for the 〈hk0〉 direction, independent of the confining pressure. Observations on samples irradiated at high pressures indicate a stabilising effect, leading to reduced amorphisation in comparison to the samples irradiated without pressure.     

Quantifying river incision into low‐relief surfaces using local and catchment‐wide 10Be denudation rates

Relief generation in non‐glaciated regions is largely controlled by river incision into bedrock but datable fluvial terraces that allow quantifying incision rates are not always present. Here we suggest a new method to determine river incision rates in regions where low‐relief surfaces are dissected by streams. The approach consists of three steps and requires the ¹⁰Be concentrations of a stream sediment sample and a regolith sample from the low‐relief surface. In the first step, the spatial distribution of ¹⁰Be surface concentrations in the given catchment is modelled by assuming that denudation rates are controlled by the local hillslope angles. The slope–denudation rate relation for this catchment is then quantified by adjusting the relation between slope angle and denudation rate until the average ¹⁰Be concentration in the model is equal to the one measured in the stream sediment sample. In the second step, curved swath profiles are used to measure hillslope angles adjacent to the main river channel. Third, the mean slope angle derived from these swath profiles and the slope–denudation relation are used to quantify the river incision rate (assuming that the incision rate equals the denudation rate on adjacent hillslopes). We apply our approach to two study areas in southern Tibet and central Europe (Black Forest). In both regions, local ¹⁰Be denudation rates on flat parts of the incised low‐relief surface are lower than catchment‐wide denudation rates. As the latter integrate across the entire landscape, river incision rates must exceed these spatially averaged denudation rates. Our approach yields river incision rates between ~15 and ~30 m/Ma for the Tibetan study area and incision rates of ~70 to ~100 m/Ma in the Black Forest. Taking the lowering of the low‐relief surfaces into account suggests that relief in the two study areas increases at rates of 10–20 and 40–70 m/Ma, respectively. Copyright © 2018 John Wiley & Sons, Ltd.     

Physical and chemical growth conditions of Ordovician organogenic deep-water dolomite concretions: implications for the δ18O of Early Palaeozoic sea water

The estimated depth of formation of authigenic dolomite concretions in the Middle Ordovician Cloridorme Formation, Quebec, ranges from < 1 m to 150–200 m below sea floor (mbsf) (mostly between < 1 and 25 mbsf), based on centre‐to‐margin variations in minus‐cement porosity (80–90% to 45–75%). Formation depths are > 350 mbsf (25–17% porosity) in the Lower Ordovician Levis Formation. Outward‐decreasing δ¹³C_VPDB values (10·2–0·8‰) suggest precipitation in the methane generation zone with an increasing contribution of light carbonate derived by advection from thermocatalytic reactions at depth. Anomalously low δ¹⁸O_VPDB values (centre‐to‐margin variations of ?0·4 to ?7·5‰) give reasonable temperatures for the concretion centres only if the δ¹⁸O of Ordovician sea water was negative (?6‰) and the bottom water was warm (> 15 °C). The 3–5‰ lower values for the concretion margins compared with the centres can be explained if, in addition, volcanic‐ash alteration, organic‐matter decomposition and/or advection of ¹⁸O‐depleted water lowered the δ¹⁸O of the pore water further by 2·0–4·0‰ during the first 25–200 m of burial. Reasonable growth temperatures for the margins of 17–20 °C are compatible with a lowering of the isotopic ratios by 1 to < 1·3‰ as a temperature effect. The systematic concentric isotope zonation of the concretions suggests that the well‐ordered near‐stoichiometric dolomite is a primary feature and not the result of recrystallization. Diagenetic dolomite beds of the Cloridorme Formation appear to have formed by coalescence of concretions, as shown by randomly sampled traverses that indicate formation at different subsurface depths. Growth of the Cloridorme dolomites was probably limited by calcium availability, at least 50% of which was derived from connate water, and the remainder by diffusion from sea water. Dolomite precipitation was favoured over calcite by very high sedimentation rates, the abundance of marine organic matter in the host sediment and a correspondingly thin sulphate reduction zone. Deep‐seated concretion growth in the Levis Formation required either internal sources for the participating ions (carbonate dissolution event) or porewater advection along faults.