Differential sensitivity of flounder (Platichthys flesus) in response to oestrogenic chemical exposure: an issue for design and interpretation of monitoring and research programmes

This study was conducted as an initial investigation of 'differential response' in one of the main sentinel organisms used for monitoring programmes in United Kingdom estuaries, the flounder Platichthys flesus. It has been hypothesised that monitoring using species with a wide geographical spread and limited migration, such as flounder, might result in the comparison of different genetic stocks and certainly of populations with differing early life stage contaminant exposure histories. Furthermore, it is probable that these pre-exposure and genetic differences could manifest themselves in an ability to respond differently to contaminant exposure, so-called 'differential response'. It is important that the extent and nature of this response is understood, if we want to be able to fully interpret the monitoring data from such programmes. During this study, flounder were collected from four separate sources; wild caught fish from the estuaries of the Rivers Alde, Mersey and Tyne, and farmed flounder from Port Erin Farm, Isle of Man. Under controlled laboratory conditions, groups of fish from each source were exposed to water-borne concentrations of the synthetic oestrogen ethynylestradiol (EE2) at a nominal concentration of 50 ng/l. Plasma was taken from each male fish after 6 and 10 days exposure and analysed for the presence of vitellogenin (VTG) using an ELISA technique. Significant levels of VTG induction were evident in fish from all sources after both 6 and 10 days exposure. Flounder from the Mersey were the only fish with significantly elevated initial background levels of VTG (day 0) and this appeared to be reflected in that these specimens showed the highest induction response after day 6. However, after day 10, fish from all other sites had a slightly higher mean VTG than those from the Mersey which showed significantly (p < 0.05) lower mean plasma VTG. It is suggested that other differential responses may have been masked by the use of a high dose of EE2 which produced maximum induction in nearly all fish. The findings of the study are discussed in terms of implications for further research into the differential response issue and how the initial plasma VTG figures contribute to a time-series from the Mersey, Tyne and Alde estuaries.     

Spatiotemporal aspects of silica buffering in restored tidal marshes

Losses of pelagic diatom production resulting from silica limitation have not only been blamed for toxic algal blooms, but for the reduction in ability of coastal food webs to support higher trophic levels. Recent research has shown the importance of advective seepage water fluxes of dissolved silica (DSi) from freshwater marshes to pelagic waters during moments of riverine Si-limitation. In this study, we investigated the potential impact of recently installed new tidal areas along the Schelde estuary, located in former polder areas and characterized by so-called controlled reduced tidal regimes (CRT). Nine mass-balance studies were conducted in a newly constructed CRT in the freshwater Schelde estuary. During complete tidal cycles both DSi and amorphous silica (ASi) concentrations were monitored at the entrance culverts and in different habitats in the marsh. A swift DSi-delivery capacity was observed despite the shifted spatiotemporal frame of exchange processes compared to reference marshes. As silica-accumulating vegetation is not yet present, and difference with reference marshes’ deliveries is surprisingly small, we indicate diatomaceous debris and phytoliths to be the main silica source. Although further research is necessary on the driving forces of the different processes involved, restoration of former agricultural areas under CRT-regime provide the potential to buffer silica in the estuary.     

Characterisation of Soot Emitted by Domestic Heating,Aircraft and Cars Using Diesel or Biodiesel

The characterisation of aggregates, like soot, firstly requires the determination of the size distribution of the primary particles. The primary particle size of combustion generated aggregates depends upon the combustion environment and the formation conditions, such as temperature, pressure and fuel-to-air ratio, among others. Since the combustion characteristics are different in the different types of burners, the characterisation of primary particles may offer the possibility to distinguish soot from different sources. In this paper, we present the signature of the primary particles and the aggregates of soot emitted by cars using diesel or biodiesel, by domestic heating, and by aircraft exhausts, which can be considered as the major sources as derived from measurements on transmission electron micrographs. The size distributions of all aggregates types with different aerodynamic diameter were log-normal and quasi-monodisperse. The size distribution of the primary particles for soot emitted by different sources showed minor differences. However, a comparison between the diameter of the primary particles and those obtained using a standard method for carbon black revealed discrepancies. The median diameter of the primary particles was combined with the median number of primary particles in an aggregate to calculate the relative particle surface area available for adsorption. In a similar way, the relative specific surface area was determined. The surface area was measured using the Brunauer-Emmett-Teller (B.E.T.) nitrogen adsorption method and the relative surface area available for adsorption was calculated.     

The Regional Ocean Modeling System (ROMS) 4-dimensional variational data assimilation systems: Part II - Performance and application to the California Current System

The Regional Ocean Modeling System (ROMS) 4-dimensional variational (4D-Var) data assimilation systems have been systematically applied to the mesoscale circulation environment of the California Current to demonstrate the performance and practical utility of the various components of ROMS 4D-Var. In particular, we present a comparison of three approaches to 4D-Var, namely: the primal formulation of the incremental strong constraint approach; the dual formulation “physical-space statistical analysis system”; and the dual formulation indirect representer approach. In agreement with theoretical considerations all three approaches converge to the same ocean circulation estimate when using the same observations and prior information. However, the rate of convergence of the dual formulation was found to be inferior to that of the primal formulation. Other aspects of the 4D-Var performance that relate to the use of multiple outer-loops, preconditioning, and the weak constraint are also explored. A systematic evaluation of the impact of the various components of the 4D-Var control vector (i.e. the initial conditions, surface forcing and open boundary conditions) is also presented. It is shown that correcting for uncertainties in the model initial conditions exerts the largest influence on the ability of the model to fit the available observations. Various important diagnostics of 4D-Var are also examined, including estimates of the posterior error, the information content of the observation array, and innovation-based consistency checks on the prior error assumptions. Using these diagnostic tools, we find that more than 90% of the observations assimilated into the model provide redundant information. This is a symptom of the large percentage of satellite data that are used and to some extent the nature of the data processing employed. This is the second in a series of three papers describing the ROMS 4D-Var systems.     

Mixed terrigenous—Carbonate sedimentation in the Hispaniola—Caicos turbidite basin

Sedimentation in the 9500 km², 4100 m deep Hispaniòla—Caicos Basin is dominated by turbidity currents. Carbonate turbidites originate from the Bahama Islands, Great Inagua and Caicos at the north end of the basin. Mixed carbonate—non-carbonate flows come from Hispaniola and perhaps Cuba. Most flows originate on insular slopes rather than in shallow water. The relatively low CaCO₃ content of hemipelagic sequences throughout the entire basin reveals that the influence of non-carbonate Hispaniola—Cuba sources is widespread.The basin was sampled with closely spaced piston cores. Sand-layer isopach and frequency maps reveal four or five major basin entry points for turbidity currents. Flow size is proportional to the size of source areas. Average volumes of flows originating from Hispaniola—Cuba, the largest source, are 10⁹ m³. This compares to an average flow volume of 10⁶ m³ for flows derived from the smallest source area, the Southeastern Caicos Bank. Measures of turbidity-current activity, such as thickness and frequency, change in a regular fashion away from each entry point. Average lutite thickness (combining hemipelagic and turbiditic lutite) are greatest near the basin entry points. On the abyssal plain occupying the south half of the basin, Bouma turbidite sedimentary structure sequences tend to be complete. However, on the Caicos Fan, the sedimentary structure sequences in turbidites are characterized by missing or repeated units. Six radiocarbon dates of two widespread presumed pelagic units in the basin yielded younger dates in stratigraphically older positions. The reversed dates are assumed to reflect storm erosion of older sediment on adjacent insular shelves.Consideration of a north—south reflection seismic profile over the basin indicates that the present sediment regimen has pertained through much of the Neogene. The coherence, convergence and termination of reflections in the seismic section are consistent with and tend to confirm conclusions based on the core study regarding the greater extent and volume of sediment deposits derived from the Hispaniola source area.     

Turbulent molecular clouds

Stars form within molecular clouds but our understanding of this fundamental process remains hampered by the complexity of the physics that drives their evolution. We review our observational and theoretical knowledge of molecular clouds trying to confront the two approaches wherever possible. After a broad presentation of the cold interstellar medium and molecular clouds, we emphasize the dynamical processes with special focus to turbulence and its impact on cloud evolution. We then review our knowledge of the velocity, density and magnetic fields. We end by openings towards new chemistry models and the links between molecular cloud structure and star-formation rates.     

Oort Cloud Comet Perihelion Asymmetries: Galactic Tide, Shower or Observational Bias?

We investigate the distribution of Oort cloud comet perihelia. The data considered includes comets having orbital elements of the two highest quality classes with original energies designated as new or young. Perihelion directions are determined in galactic, ecliptic and geocentric equatorial coordinates. Asymmetries are detected in the scatter and are studied statistically for evidence of adiabatic galactic tidal dynamics, an impulse-induced shower and observational bias. The only bias detected is the well-known deficiency of observations with perihelion distances q > 2.5 AU. There is no significant evidence of a seasonal dependence. Nor is there a substantive hemispherical bias in either ecliptic or equatorial coordinates. There is evidence for a weak stellar shower previously detected by Biermann which accounts for ≈ 10% of the total observations. Both the q bias and the Biermann star track serve to weaken the evidence for a galactic tidal imprint. Nevertheless, statistically significant asymmetries in galactic latitude and longitude of perihelia remain. A latitude asymmetry is produced by a dominant tidal component perpendicular to the galactic disk. The longitude signal implies that ≈ 20% of new comets need an additional dynamical mechanism. Known disk non-uniformities and an hypothetical bound perturber are discussed as potential explanations. We conclude that the detected dynamical signature of the galactic tide is real and is not an artifact of observational bias, impulsive showers or poor data. This revised version was published online in July 2006 with corrections to the Cover Date.     

A data assimilation approach to discharge estimation from space

River discharge is currently monitored by a diminishing network of gauges, which provide a spatially incomplete picture of global discharges. This study assimilated water level information derived from a fused satellite Synthetic Aperture Radar (SAR) image and digital terrain model (DTM) with simulations from a coupled hydrological and hydrodynamic model to estimate discharge in an un‐gauged basin scenario. Assimilating water level measurements led to a 79% reduction in ensemble discharge uncertainty over the coupled hydrological hydrodynamic model alone. Measurement bias was evident, but the method still provided a means of improving estimates of discharge for high flows. The study demonstrates the potential of currently available synthetic aperture radar imagery to reduce discharge uncertainty in un‐gauged basins when combined with model simulations in a data assimilation framework, where sufficient topographic data are available. The work is timely because in the near future the launch of satellite radar missions will lead to a significant increase in the volume of data available for space‐borne discharge estimation. Copyright © 2009 John Wiley & Sons, Ltd.