Textural and mineralogical biosignatures in an unusual microbialite from Death Valley, California

For in situ astrobiological studies of Mars or other planets, we must employ strategies that will enable us to verify whether our approach and prototype instruments are actually capable of distinguishing life from non-life. This must be done against a background of rigorously conducted scientific characterization of the environment or sample types being considered for measurement by the instruments under development. In this study we show how a combination of mineralogical and textural features can be considered a biosignature in an early Mars analogue environment, Death Valley, California. We propose that it is a combination of features in context of the geologic matrix which allows determination of biogenicity to be made. Polymineralic microbialites (organosedimentary formations constructed by microorganisms) from a spring pool at Badwater, within Death Valley National Park, are composed of alternating biogenic and abiogenic minerals in a distinct triplet sequence related to wet and dry seasons. A microbial community, occurring as a black biofilm, produced paired layers of two different mineral types: manganese oxyhydroxides and calcite. These biogenic layers are separated from the next pair by a gypsum layer and appear to be laid down in the wet season, with the gypsum (a mineral positively identified on Mars) precipitating in the dry part of the year, abiogenically (i.e., not dependent on microbial metabolic activity for its deposition). In addition, textural features (smaller grain size and less geometric morphology) unique to the biogenic vs the abiogenic layers, were consistently observed so that texture served as a biosignature in this environment.     

Aspects of Assaying Sediment Toxicity in Irish Estuarine Ecosystems

The toxicity of surface sediments collected from eight estuarine sites around the Irish coast was assessed in March 1997 using a whole sediment bioassay. Two molluscan species, Tapes semidecussatus (1 + age class) and Scrobicularia plana (unknown age) were exposed to test sediments for 21 days. Survival, morphometric, behavioural and histochemical measurements were taken during the 21 day bioassay. 100% mortality occurred in both species in sediments from one site in Dublin Bay within 18 days of initial exposure. 100% survival of T. semidecussatus was observed in all but four of the test sediments to which it was exposed during this study. The animal condition and wet tissue weight of T. semidecussatus decreased for all sediments during the bioassay. 95% survival of S. plana was observed after 21 days exposure to Youghal (reference) sediment. Condition and wet tissue weight of S. plana increased in all test sediments during the bioassay, however, there was significant variation in wet tissue weight of this species on day 25 of the bioassay in all test sediments. There was significant variation in the burrowing behaviour of S. plana during the bioassay. Lipofuscin accumulation was observed in the digestive diverticula of T. semidecussatus exposed to all test sediments with the exception of Youghal (reference). The potential for both species as bioassay organisms is discussed.     

Seasonal Variation in the Phytoplanktonic Community,Seston and Environmental Variables During a 2-Year Period and Oyster Growth at Two Mariculture Sites,Southern Chile

Phytoplankton and its relationships with physical and chemical variables were analysed over a 2-year period in Hueihue and Linao Bays (southern Chile). Samples were collected on a monthly basis from May 1991 to May 1993. The growth rate of a single stock of hatchery-produced oysters (Ostrea chilensis) distributed between these two bays was also monitored monthly. The growth rate of oysters maintained at Linao Bay (site associated with a fish farm) was significantly higher, at every depth, compared with the oysters maintained at Hueihue Bay. Temperature and salinity values and their annual fluctuations were similar at both locations, presenting higher variations at the surface (1 m) due to the influence of air temperature and local precipitation than at depth. However, significant differences in phytoplankton abundance and composition were found between the two locations. The phytoplankton community was characterized by high biomass values during spring and summer, the dominance of diatoms and an inverse relationship between temperature and species diversity. However, phytoplankton cell abundance, biovolume and chlorophyll a concentration were significantly higher at Linao at every depth sampled. Cell abundance ranged between 4.49 × 10⁴ and 7.45 × 10⁶ cells · l^?1 in Hueihue and between 6.48 × 10⁴ and 8.71 × 10⁶ cells ·1^?1 in Linao. The influence of temperature on chlorophyll a concentration was significant except at 8 m at both locations. The instantaneous oyster growth rate was found to be positively correlated with temperature, chlorophyll a concentration and particulate organic matter at both locations. A significant negative relationship between oyster growth and amount of particulate inorganic matter was found; this confirms the important role played by seston composition in oyster growth. The demonstration of variation in oyster growth rate associated with differences in food availability between the two locations provides insight into the ecological role played by fish farms in southern Chile. The results suggest a strong link between food availability and oyster growth.     

CYP1B1 knockdown does not alter synergistic developmental toxicity of polycyclic aromatic hydrocarbons in zebrafish (Danio rerio)

Polycyclic aromatic hydrocarbons (PAHs) are contaminants increasing in the environment largely due to burning of fossil fuels. Our previous work identified a synergistic toxicity interaction in zebrafish embryos occurring when PAHs that are agonists for the aryl hydrocarbon receptor (AHR) co-occur with PAHs that are CYP1A inhibitors. This toxicity is mediated by the AHR2, and morpholino knockdown of CYP1A exacerbated toxicity. This study tested two hypotheses: (1) in the absence of functional CYP1A, metabolism of PAHs is shunted towards CYP1B1, which has been shown in mammals to produce more reactive metabolites of PAHs; alternatively, (2) CYP1B1 serves a protective role similar to CYP1A. We used a morpholino approach to knockdown CYP1B1 alone and in co-knockdown with CYP1A to determine whether we could alter deformities caused by synergistic toxicity of PAHs. CYP1B1 knockdown was not different from non-injected controls; nor were CYP1B1+CYP1A co-knockdown deformities different from CYP1A knockdown alone. These data suggest that CYP1B1 is not a significant factor in causing synergistic toxicity of PAHs, nor, in contrast to CYP1A, in providing protection.     

Chromophoric Dissolved Organic Matter (CDOM) In Rainwater,Southeastern North Carolina,USA

The abundance and optical characteristics of dissolved organic matter (DOM) were determined in 120 rain samples collected in Wilmington, North Carolina, USA, between February 21, 2002 and August 11, 2003. All rainwater samples contained chromophoric dissolved organic matter (CDOM) as well as fluorescent compounds. The absorbance spectra of CDOM in the samples decreased exponentially with wavelength with little or no measurable absorbance past 550 nm. Fluorescence excitation emission spectra (EEMS) of the precipitation revealed the presence of four major peaks indicating both terrestrial and marine influences. There was a strong positive correlation between total integrated fluorescence and the absorbance coefficient at 300 nm in rainwater samples, suggesting that these optical properties are directly interrelated and that the compounds responsible for absorbance may be the same as those responsible for fluorescence. Air-mass back-trajectory analysis indicated elevated CDOM levels in continentally influenced rainwater relative to marine dominated events implying that anthropogenic and/or terrestrial sources are important contributors to CDOM levels in precipitation. The presence of highly absorbing and fluorescing CDOM in rainwater has significant ramifications in atmospheric chemistry and may play a previously unrecognized role in the wavelength dependent spectral attenuation of solar radiation by atmospheric waters.     

Rates of zinc and trace metal release from dissolving sphalerite at pH 2.0–4.0

High-Fe and low-Fe sphalerite samples were reacted under controlled pH conditions to determine nonoxidative rates of release of Zn and trace metals from the solid-phase. The release (solubilization) of trace metals from dissolving sphalerite to the aqueous phase can be characterized by a kinetic distribution coefficient, (D_tr), which is defined as [(R_tr/X(tr)_Sph)/(R_Zn/X(Zn)_Sph)], where R is the trace metal or Zn release rate, and X is the mole fraction of the trace metal or Zn in sphalerite. This coefficient describes the relationship of the sphalerite dissolution rate to the trace metal mole fraction in the solid and its aqueous concentration. The distribution was used to determine some controls on metal release during the dissolution of sphalerite. Departures from the ideal D_tr of 1.0 suggest that some trace metals may be released via different pathways or that other processes (e.g., adsorption, solubility of trace minerals such as galena) affect the observed concentration of metals.     

The Chemistry of Actinide Behavior in Marine Systems

Nuclear test explosions and reactor waste releases have deposited an estimated 16 × 10¹⁵ Bq of plutonium into the world's oceans. Chemical speciation, oxidation state, redox reactions, and sorption characteristics are integral in predicting solubility of the different actinides, their migration behaviors and their potential effects on marine biota. Transport mechanisms, biosequestration, interactions with carbonate and humic substances and chemical redox and speciation influence migration patterns. Analytical methods such as ultraviolet-visible absorption spectrophotometry, laser-induced photoacoustic spectroscopy and mass spectrometry are utilized to obtain information on the chemical speciation and oxidation states at sub-tracer levels. Predictive computer models has attempted to evaluate the extensive data needed to adequately parameterize the complex, interdependent and continuous processes involved.     

Requirement of endogenous iron for cytotoxicity caused by hydrogen peroxide in Euglena gracilis

It is widely thought that redox-active metals in cells such as iron or copper catalyze the reduction of hydrogen peroxide to toxic hydroxyl radicals or their equivalent. However, this has not been directly demonstrated in vivo. To probe this requirement, the freshwater microorganism Euglena gracilis was used. Its intracellular iron content can be modulated by the concentration of iron in the defined growth medium without effect on the proliferation rate of the cells. E. gracilis contains two large storage pools of cytosolic iron which can be monitored to assess cellular iron status. The toxicity of H₂O₂ in E. gracilis was inversely related to the amount of iron in the extracellular medium. At high levels of external iron, the metal carried out the Fenton reaction with H₂O₂ outside the cell, producing hydroxyl radicals as detected by electron-spin resonance spin-trapping experiments. This reaction reduced the amount of H₂O₂ that could diffuse into cells to cause toxicity. When cells with different intracellular iron content were placed in iron-deficient media, the the toxicity of H₂O₂, measured by inhibition of proliferation, was directly related to the concentration of internal iron. Using cells deficient in iron, this oxidant did not inhibit proliferation at low concentration but was somewhat effective at higher concentrations. Although the iron chelating agents, 1,10-phenanthroline and desferrioxamine, also depressed cytosolic iron, they were cytotoxic to E. gracilis and so could not be used unambiguously to examine the role of intracellular iron in the toxic effects of hydrogen peroxide.     

Changes in landuse/landcover patterns and human population growth in the Lake Chivero catchment,Zimbabwe

The land use and land cover pattern of a region is a consequence of natural and socio-economic factors and their utilization by man in time and space. In this study, we hypothesized that land use and land cover change patterns in the Lake Chivero catchment, Zimbabwe, were related to its human population dynamics. Using nonparametric correlation coefficients (Spearman’s rho, ρ), we found that bareland, cropland and built-up land had positive relations with human population growth of ρ = 0.7, ρ = 0.9 and ρ = 1, respectively. Grassland/shrubland, water and forest, on the other hand, had a negative relationship with human population growth of ρ = ?0.9, ρ = ?0.7 and ρ = ?0.667, respectively. However, these relationships were only significant (p < 0.05) for cropland, grassland/shrubland and built-up land. Human population dynamics in the Lake Chivero catchment could be one of the major drivers of land use and land cover change in the catchment between 1986 and 2014.     

Crustal assimilation during turbulent magma ascent (ATA); new isotopic evidence from the Mull Tertiary lava succession,N. W. Scotland

Assimilation of crustal rocks with concomitant fractional crystallisation (AFC) is a well documented phenomenon in many igneous suites, but geochemical evidence from the Tertiary Mull lava succession suggests that in these magmas crustal contamination occurred by a distinctly different mechanism. Lavas from the lower half of the Mull Plateau group (MPG) can be divided into two broad sub-types; high (>8%) MgO basalts with elevated Ba and K; and lower MgO (<8%) basaltic-hawaiites with lower Ba and K. The lower crust and most of the upper crust beneath Mull is probably of Lewisian age. The Sr-, Nd-and Pb-isotope compositions of local Lewisian crustal samples yield the following ranges: ⁸⁷Sr/⁸⁶Sr=0.71002–0.72348, ¹⁴³Nd/¹⁴⁴Nd=0.51045–0.51058 and ²⁰⁶Pb/²⁰⁴Pb=14.0–14.6. Ten lavas have also been analysed and yield the following ranges: ⁸⁷Sr/⁸⁶Sr=0.7028–0.7042, ¹⁴³Nd/¹⁴⁴Nd=0.51214–0.51230 and ²⁰⁶Pb/²⁰⁴Pb=15.1–17.9. However, within this range, it is predominantly the more primitive mafic compositions, with elevated Mg, Ba and K, that show the lowest Nd- and Pb-, and the highest Sr-isotope values. Modelling of these isotopic results, in conjunction with major and trace element data, show that: (1) contamination by Lewisian lower crustal material does occur; (2) that the process involved was not one of assimilation with concomitant fractional crystallisation (AFC). The proposed contamination process is one whereby the hottest (most MgO rich) magmas have assimilated acidic partial melts of Lewisian lower crust during turbulent ascent (ATA) through thin, poorly connected dyke- and sill-like magma chambers. The chemical composition of the contaminated lavas can be modelled successfully through addition of 5% acidic Lewisian crust to an uncontaminated lava. In contrast, the more evolved magmas — which probably fractionated at sub-crustal levels — were either not hot enough to molt significant amounts of crust, or did not ascend turbulently because of their higher viscosity, and so are less contaminated with crust.