Simulation of modern climate with the new version of the INM RAS climate model

The INMCM5.0 numerical model of the Earth’s climate system is presented, which is an evolution from the previous version, INMCM4.0. A higher vertical resolution for the stratosphere is applied in the atmospheric block. Also, we raised the upper boundary of the calculating area, added the aerosol block, modified parameterization of clouds and condensation, and increased the horizontal resolution in the ocean block. The program implementation of the model was also updated. We consider the simulation of the current climate using the new version of the model. Attention is focused on reducing systematic errors as compared to the previous version, reproducing phenomena that could not be simulated correctly in the previous version, and modeling the problems that remain unresolved.     

Identification and Lagrangian analysis of oceanographic structures favorable for fishery of neon flying squid (<Emphasis Type="Italic">Ommastrephes bartramii</Emphasis>) in the South Kuril area

Based on the AVISO velocity field, we compute daily synoptic Lagrangian maps in the South Kuril area for the fishery seasons of 1998, 1999, and 2001–2005 from available catching data on neon flying squid (NFS). With the help of drift maps for artificial particles, we found that the majority of NFS fishing grounds featuring maximum catches are situated near large-scale Lagrangian intrusions: tongues of water penetrating the surrounding water of other Lagrangian properties. It is shown that the NFS catch locations tend to accumulate at places where waters with different magnitudes of certain Lagrangian indicators converge, mix, and produce filaments, swirls, and tendrils typical of chaotic advection. Potential NFS fishing grounds are mainly located near (1) Lagrangian intrusions of the Subarctic front, (2) intrusions of Okhotsk Sea and Oyashio waters around mesoscale anticyclones east of Hokkaido with subsequent penetration of catch locations inside eddies and (3) intrusions of subtropical waters into the central part of the South Kuril area due to interaction with eddies of different size and polarity. Possible reasons for increased biological production and fishery in the vicinity of Lagrangian intrusions are discussed.     

Population Genetic Structure of Rock Bream (<Emphasis Type="Italic">Oplegnathus fasciatus</Emphasis> Temminck &amp; Schlegel, 1884) Revealed by mtDNA COI Sequence in Korea and China

The rock bream, Oplegnathus fasciatus, is a common rocky reef game fish in East Asia and recently has become an aquaculture species. Despite its commercial importance, the population genetic structure of this fish species remains poorly understood. In this study, 163 specimens were collected from 6 localities along the coastal waters of Korea and China and their genetic variation was analyzed with mtDNA COI sequences. A total of 34 polymorphic sites were detected which determined 30 haplotypes. The genetic pattern reveals a low level of nucleotide diversity (0.04 ± 0.003) but a high level of haplotype diversity (0.83 ± 0.02). The 30 haplotypes are divided into two major genealogical clades: one that consists of only Zhoushan (ZS, East China Sea) specific haplotypes from the southern East China Sea and the other that consists of the remaining haplotypes from the northern East China Sea, Yellow Sea, Korea Strait, and East Sea/Sea of Japan. The two clades are separated by approximately 330~435 kyBP. Analyses of AMOVA and F_st show a significant population differentiation between the ZS sample and the other ones, corroborating separation of the two genealogical clades. Larval dispersal and the fresh Yangtze River plume are invoked as the main determining factors for this population genetic structure of O. fasciatus. Neutrality tests and mismatch distribution analyses indicate late Pleistocene population expansion along the coastal waters of Korea and China approximately 133–183 kyBP during which there were periodic cycles of glaciations and deglaciations. Such population information needs to be taken into account when stock enhancement and conservation measures are implemented for this fisheries species.     

Variability in Particle Mixing Rates in Sediments with Polymetallic Nodules in the Equatorial Eastern Pacific as Determined from Measurements of Excess <Superscript>210</Superscript>Pb

Radionuclide activities of ²¹⁰Pb and ²²⁶Ra were measured to determine bioturbation coefficients (D_b) in seven sediment cores from the Korean licensed block for polymetallic nodules in the Clarion–Clipperton Fracture Zone. Variability in D_b is considered in the context of the sedimentological, geochemical, and geotechnical properties of the sediments. D_b values in the studied cores were estimated using a steady-state diffusion model and varied over a wide range from 1.1 to 293 cm²/yr with corresponding mixing depths (L) of 26 to 144 cm. When excepting for spurious results obtained from cores where diffusive mixing does not apply, D_b values range from 1.1 to 9.0 cm²/yr with corresponding mixing depths (L) of 26 to 63 cm. Such wide variability in D_b and L values is exceptional in sites with water depths of ～5000 m and is attributed in this study to an uneven distribution of sediment layers with different shear strengths and total organic carbon (TOC) contents, caused by erosion events. The studied cores can be grouped into two categories based on lithologic associations: layers with high maximum shear strength (MSS) and low TOC content, showing a narrow range of D_b values (1.1–9.0 cm²/yr); and layers with low MSS and high TOC content, yielding much higher D_b values of over 30 cm²/yr. The distribution of different lithologies, and the resultant spatial variability in MSS and labile organic matter content, controls the presence and maximum burrowing depth of infauna by affecting their mobility and the availability of food. This study provides a unique case showing that shear strength, which relates to the degree of sediment consolidation, might be an important factor in controlling rates of bioturbation and sediment mixing depths.     

Experiments on Surface Waves Interacting with Flexible Aquatic Vegetation

Surface wave interaction with aquatic vegetation appears to play a key role in coastal hydro-morpho-dynamics. As an example, the presence of a dense meadow at intermediate water depth is usually associated with a stable and resilient shore. Wave-meadow interactions are investigated here by means of physical modelling, with a focus on wave height distribution and hydrodynamics. The central part of a wave flume is covered by flexible artificial seagrass, composed of polyethylene leaves. This vegetation is tested in both near emergent and submerged conditions. The wave height reduction is evaluated by means of a drag coefficient defined from linear wave theory, which contains all the unknowns of the adopted methodology. The behaviour of such a coefficient is investigated as a function of a wave related Reynolds number. The influence of the flexibility of the leaves is also considered, together with a wave frequency parameter. The results show a complex behaviour with three different trends for near rigid, intermediate or highly flexible leaves. Amplitudes of the orbital velocities are investigated and show a fairly good match with the linear wave theory. On the contrary, the mean velocity along the water column appears to be modified by the seagrass for submerged leaves.     

Free Vibration Analysis of Symmetrically Laminated Composite Plates on Elastic Foundation and Coupled with Stationary Fluid

Free vibration analysis of symmetrically laminated composite plates resting on Pasternak elastic support and coupled with an ideal, incompressible and inviscid fluid is the objective of the present work. The fluid domain is considered to be infinite in the length direction but bounded in the depth and width directions. In order to derive the eigenvalue equation, Rayleigh-Ritz method is applied for the fluid-plate-foundation system. The efficiency of the method is proved by comparison studies with those reported in the open literature. At the end, parametric studies are carried out to examine the impact of different parameters on the natural frequencies.     

Nitrogen and phosphorus in New Zealand streams and rivers: Control and impact of eutrophication and the influence of land management

Abstract

Given sufficient light and heat, the growth of aquatic macrophytes and algae associated with eutrophication is generally controlled by the concentration, form and ratio between nitrogen (N) and phosphorus (P). Data from 1100 freshwater sites monitored for the last 10 years by New Zealand's regional councils and unitary authorities were assessed for streams and rivers with mean nitrate/ nitrite‐N (NNN), dissolved reactive P (DRP), total N (TN) and total P (TP) concentrations in excess of New Zealand guidelines, and to generate a data set of N:P ratios to predict potential periphyton response according to the concentration of the limiting nutrient. The frequency of sites exceeding the guidelines varied from 0 to 100% depending on the parameter and region, but South Island regions were generally more compliant. The dissolved inorganic N (DIN) to dissolved reactive P (DRP) ratio was used to group data into three nutrient limitation classes: <7:1 (N‐limited), between 7:1 and 15:1 (co‐limited), and>15:l (P‐limited), by mass. P‐limitation was the most frequent scenario in New Zealand streams (overall, 76% of sites were P‐limited, 12% N‐limited, and 12% co‐limited). The mean concentration of the limiting nutrient for each site was combined with empirical relationships to predict periphyton densities (the average of N‐and P‐limited growth was used for sites with co‐limitation). This assessment predicted that 22 sites were likely to exceed the periphyton guideline for protecting benthic biodiversity (50 mg chlorophyll a m^?2), but this assessment is likely to be highly changeable in response to climatic conditions and present and future land use. As an example, we modelled N and P losses from an average sheep and a dairy farm in Southland (South Island, New Zealand) in 1958, 1988, 2008 and 2028. We predicted that with time, as farm systems have and continue to intensify, N losses increase at a greater rate than P losses. Since the pathway for N to reach fresh waters may be more tortuous and take longer than P to reach a stream or river, focusing mitigation on P losses may have a quicker effect on potential algal growth. In addition, with time, it is expected that P‐limitation in New Zealand's rivers and streams will be more widespread as N‐losses are unabated. Hence, although strategies to decrease N losses should be practised, mitigating P losses is also central to preventing eutrophication.     

Sea Level Variations Associated with Upwelling/ Downwelling Along the West Coast of India

A three-dimensional numerical model is developed and used to study the coastal upwelling processes and corresponding seasonal changes in the sea level along the west coast of India. The upwelling and associated sea level variations are seen as a response of coastal ocean to pure wind stress forcing. The model is designed to represent coastal ocean physics by resolving surface and bottom Ekman layers as realistically as possible. The prognostic variables are the three components of the velocity field, temperature, salinity and turbulent energy. The governing equations together with their boundary conditions are solved by finite-difference techniques. Experiments are performed to investigate sea level fluctuations associated with the thermal response and alongshore currents of the coastal waters. The model is forced with mean monthly wind stress forcing of January, May, July and September representing northeast monsoon and different phases of the southwest monsoon. It is known from the observational study that the upwelling process reaches to the surface waters by May along the coastal waters of the extreme southwest peninsular region. The process is more intense in July compared to May and September and its strength decreases from south to north. However, during the northeast monsoon season, which is represented by January wind stress forcing in the model, downwelling is simulated along the coast. The model simulations of the coastal response are compared with the observations and are found to be in good agreement. The maximum computed vertical velocity of about 2.0 2 10 -3 cm s -1 is predicted in July in the southern region off the coast.     

Ibiza Absolute Calibration Experiment: Survey and Preliminary Results

Within the framework of a project comprising part of the Spanish Space Program related to the JASON-1 CNES (Centre National d'Etudes Spatiales)/NASA (National Aeronautics and Space Administration) mission, a campaign was conducted from June 9–17, 2003, on the Absolute Calibration Site of the island of Ibiza. The objective was to determine the local marine geoid slope under the ascending (187) and descending (248) Jason-1 ground tracks, in order to allow a better extrapolation of the open-ocean altimetric data with on-shore tide gauge locations, and thereby improve the overall precision of the calibration process. For this we have used a catamaran with two GPS antennas onboard, following the Corsica/Senetosa design (Bonnefond et al. 2003a Bonnefond, P., Exertier, P., Laurain, O., Menard, Y., Orsoni, A., Jeansou, E., Haines, B., Kubitschek, D. and Born, G. 2003a. Leveling Sea Surface using a GPS catamaran. Marine Geodesy, 26(3–4): 319–334. [Taylor &; Francis Online], [Web of Science ®] , [Google Scholar]). Five GPS reference stations were deployed in order to reduce the distance between the areas covered by the catamaran and the fixed GPS receiver used in the kinematic process. The geodetic activities (e.g., GPS, leveling) have enabled the building of a very accurate (few mm) network in a reference frame compatible with the satellite altimetry missions (ITRF 2000). The GPS kinematic data were processed using two different software programmes, allowing checking of the consistency of the solutions. If the standard deviation of the differences (3.3 cm) is close to the kinematic process precision, they exhibit some large values (up to 14 cm). These large discrepancies have been reduced using a weighting based on the crossover differences. Inasmuch as the distances between the tide gauges and the areas covered by the GPS catamaran were becoming large, we have used the MOG2D ocean model (Carrère and Lyard 2003 Carrère, L. and Lyard, F. 2003. Modelling the barotropic response of the global ocean to atmospheric wind and pressure forcing—comparisons with observations. Geophys. Res. Letters, 30(6) [Google Scholar]) to correct the sea surface from tides. In the farthest areas, the crossover differences show an improvement by a factor of two. Finally, we also present preliminary results on Jason-1 altimeter calibration using the derived marine geoid. From this analysis, the altimeter bias is estimated to be 120 ± 5 mm. The quality of this first result validates the whole GPS-based marine geoid processing, for which the accuracy is estimated to be better than 3 cm rms at crossovers.