Life Histories, Salinity Zones, and Sublethal Contributions of Contaminants to Pelagic Fish Declines Illustrated with a Case Study of San Francisco Estuary, California, USA

Human effects on estuaries are often associated with major decreases in abundance of aquatic species. However, remediation priorities are difficult to identify when declines result from multiple stressors with interacting sublethal effects. The San Francisco Estuary offers a useful case study of the potential role of contaminants in declines of organisms because the waters of its delta chronically violate legal water quality standards; however, direct effects of contaminants on fish species are rarely observed. Lack of direct lethality in the field has prevented consensus that contaminants may be one of the major drivers of coincident but unexplained declines of fishes with differing life histories and habitats (anadromous, brackish, and freshwater). Our review of available evidence indicates that examining the effects of contaminants and other stressors on specific life stages in different seasons and salinity zones of the estuary is critical to identifying how several interacting stressors could contribute to a general syndrome of declines. Moreover, warming water temperatures of the magnitude projected by climate models increase metabolic rates of ectotherms, and can hasten elimination of some contaminants. However, for other pollutants, concurrent increases in respiratory rate or food intake result in higher doses per unit time without changes in the contaminant concentrations in the water. Food limitation and energetic costs of osmoregulating under altered salinities further limit the amount of energy available to fish; this energy must be redirected from growth and reproduction toward pollutant avoidance, enzymatic detoxification, or elimination. Because all of these processes require energy, bioenergetics methods are promising for evaluating effects of sublethal contaminants in the presence of other stressors, and for informing remediation. Predictive models that evaluate the direct and indirect effects of contaminants will be possible when data become available on energetic costs of exposure to contaminants given simultaneous exposure to non-contaminant stressors.     

Assessment of perfluorinated compounds (PFCs) in plasma of bottlenose dolphins from two southeast US estuarine areas: relationship with age, sex and geographic locations

Plasma PFCs were measured in 157 bottlenose dolphins (Tursiops truncatus) sampled from two US southeast Atlantic sites (Charleston (CHS), SC and Indian River Lagoon (IRL), FL) during 2003-2005. ∑PFCs, perfluoroalkyl carboxylates (∑PFCAs), perfluoroalkyl sulfonates (∑PFSAs) and individual compounds were significantly higher in CHS dolphins for all age/sex categories compared to IRL dolphins. Highest ∑PFCs concentrations occurred in CHS juvenile dolphins (2340 ng/g w.w.); significantly higher than found in adults (1570 ng/g w.w. males; 1330 ng/g w.w. females). ∑PFCAs were much greater in CHS dolphins (≈ 21%) compared to IRL dolphins (≈ 7%); ∑PFSAs were 79% in CHS dolphins versus 93% in IRL dolphins. PFOS, the dominant compound, averaged 72% and 84%, respectively, in CHS and IRL dolphins. Decreasing PFC levels occurred with age on the bioaccumulation of PFCs in both sites. These observations suggest PFC accumulation in these two dolphin populations are influenced by site-specific exposures with significantly higher levels in CHS dolphins.     

Paleolimnological evidence of mining and demographic impacts on Lac Dauriat, Schefferville (subarctic Québec, Canada)

Qualitative and quantitative analysis of fossil diatoms and geochemical signals preserved in the sediments of Lac Dauriat (subarctic Quebec) were performed to evaluate the impacts of nearby mining activity and the expansion of the town of Schefferville on the water quality of the lake, and to reconstruct the changes of its trophic status. The presence of taxa typical of nutrient-enriched environments (e.g., Cyclostephanos invisitatus, Nitzschia gracilis, Nitzschia perminuta) and the low percentages of chrysophytes were indicative of the advanced state of eutrophication of the lake during the peak of mining activity, and were evidence of the negative impacts of municipal waste on the water quality of Lac Dauriat. Sedimentary analysis of metals, notably lead, mercury, cadmium, bismuth, cobalt, copper and zinc, showed maximum concentrations between 1940 and 1960 with mining era to pre-development enrichment factors ranging from 4.5 to 7.9. The changes seen in recent sediments reflected 3 distinct stages in the recent history of this ecosystem: (a) the non-perturbed, pre-mining (1882–1939), (b) the perturbed, mining period (1939–1977) with accelerated eutrophication, and (c) the post-mining period (1977–1999) with indications of natural recovery of the system after the installation of a water treatment plant in 1975, the closing of the mine in 1983, and the subsequent exodus of the town’s population. Despite the trajectory towards a return to the lake’s natural conditions, water resource managers and (paleo-)limnologists should be alarmed that the impacts of past human disturbance are still in evidence more than 20 years after the closure of the mines, and that Lac Dauriat has yet to reach its natural state of the period preceding extreme anthropogenic impact.     

Effective intellectual property protection of traditional knowledge of plants and their uses: an example from Australia

Intellectual property rights (IPR) to traditional knowledge (TK) about Australian native plants could justifiably be described as a birthright of Australian Aboriginal people. However, as is generally the case throughout the world, this right is currently not protected under Australian law. A case study is presented describing the approach that was taken to protecting the plant knowledge rights of traditional knowledge (TK) holders who participated in research at Titjikala, central Australia. From a review of international efforts aimed at developing a legal regime for protection of traditional knowledge (TK) intellectual property rights (IPR), we found that protecting traditional knowledge (TK) of plants and their uses is most likely to be achieved through the development of effective protocols for preserving and recording traditional knowledge (TK) and the use of contract law in commercial applications of that knowledge. The process of negotiating a research agreement between the research organisations and the community is described. Relationship building and a partnership approach based on trust and mutual respect were found to be of fundamental importance. The negotiated agreement ensures that the community has an equal share to research partners in any benefits that might arise from commercialisation of research findings. The approach to benefit sharing developed in this project has application in other research projects in which the sharing of traditional knowledge (TK) is a fundamental and essential component of the research process.     

Enigmatic clastic pipe swarms and implications for fluidization dynamics in aeolian deposits

Soft‐sediment deformation of contorted and massive sandstone is common throughout much of the siliciclastic record, but clastic pipes represent a distinctive class of pressurized synsedimentary features. Remarkable centimetre to metre‐scale clastic pipe exposures in the Jurassic Navajo Sandstone of Utah (USA) establish a range of pipe sizes, expressions and relationships to the host rock in an erg margin setting, traditionally thought to be just a dry desert system. In particular, the field and laboratory characterizations of cylindrical pipes show internal concentric, annular rings that imply water fluidization, with alignment of long grain axes due to shear flow along pipe margins. Central interior parts of decimetre‐scale pipes appear massive in plan view, but display weakly developed pseudobedding from post‐pressure release, gravitational settling in the cross‐sectional view. Deformation features of conjugate fractures, ring faults, hypotrochoid patterns (geometric arcs and circles) and breccia in the host material reflect both brittle and ductile behaviour in response to the fluidization and injection of the clastic pipes. The stratigraphic context of individual pipes and the stratabound intervals of pipe features imply dynamic deformation nearly coincident with deposition in this Early Jurassic aeolian system related to multiple factors of groundwater expulsion, timing and local host sediment properties that influenced pipe development. Although the pipe features might be easily overlooked as a smaller scale feature of soft‐sediment deformation in dune deposits, these are valuable environmental indications of disrupted fluid pathways within porous, reservoir quality sands, associated with possible combinations of periodic springs, high water‐table conditions and strong ground‐motion events. These pipe examples may be important analogues where exposures are not so clear, with applications to diverse modern and ancient clastic settings internationally on Earth as well as in planetary explorations such as on Mars.     

Stable and clumped isotopes in desert carbonate spring and lake deposits reveal palaeohydrology: A case study of the Lower Jurassic Navajo Sandstone,south‐western USA

Carbon, oxygen and clumped isotope (Δ₄₇) values were measured from lacustrine and tufa (spring)‐mound carbonate deposits in the Lower Jurassic Navajo Sandstone of southern Utah and northern Arizona in order to understand the palaeohydrology. These carbonate deposits are enriched in both ¹⁸O and ¹³C across the basin from east to west; neither isotope is strongly sensitive to the carbonate facies. However, ¹⁸O is enriched in lake carbonate deposits compared to the associated spring mounds. This is consistent with evaporation of the spring waters as they exited the mounds and were retained in interdune lakes. Clumped isotopes (Δ₄₇) exhibit minor systematic differences between lake and tufa‐mound temperatures, suggesting that the rate of carbonate formation under ambient conditions was moderate. These clumped isotope values imply palaeotemperature elevated beyond reasonable surface temperatures (54 to 86°C), which indicates limited bond reordering at estimated burial depths of ca 4 to 5 km, consistent with independent estimates of sediment thickness and burial depth gradients across the basin. Although clumped isotopes do not provide surface temperature information in this case, they still provide useful burial information and support interpretations of the evolution of groundwater locally. The findings of this study significantly extend the utility of combining stable isotope and clumped isotope methods into aeolian environments.     

Tourism impacts on benthic communities of sandy beaches

This study evaluated the effect of human trampling on the benthic macrofauna of two beaches in Southeast Brazil with different levels of intensity of tourism, Grussaí (more impacted) and Manguinhos (less impacted), during periods of high and low tourism activity. The macrofauna of urbanized (U) and non‐urbanized (NU) sectors of the inter‐tidal zone was sampled and the number of visitors was recorded. General linear models revealed a decreasing in abundance of macrofauna species in the urbanized sectors of analyzed beaches, which are exposed to higher trampling impact than in non‐urbanized areas. At Manguinhos Beach, trampling did not affect the macrofauna (<1 visitors ? m^?²), except for the polychaete Scolelepis sp., which was less abundant in the U sector. Considering the benthic community, Atlantorchestoidea brasiliensis, Hemipodia californiensis and Scolelepis sp. were more sensitive to human trampling pressure and may be used as potential bioindicators of tourism impact. Management plans should consider mitigation of the effects of tourism, such as the control of the visitor number and their decentralization.     

Land use and the spatial distribution of perfluoroalkyl compounds as measured in the plasma of bottlenose dolphins (Tursiops truncatus)

The distribution of perfluoroalkyl compounds (PFCs) in the environment is well documented with higher concentrations observed in wildlife located in industrial and urban areas. This study examined the distribution of PFCs in relation to land use using blood samples collected from bottlenose dolphins during capture-release health assessment surveys conducted in Charleston, SC. The study area was partitioned into three subareas (ACW, CHS, and SRE) based upon habitat and land use characteristics. The ACW and CHS subareas are characterized by high degrees of industrial and urban land uses, while the SRE subarea is more residential and characterized by a lower degree of developed land use. Long-term monitoring data from photo-identification surveys were used to group bottlenose dolphins based on their proportions of sightings in the different subareas. Dolphins affiliated with both the ACW and CHS subareas were observed to have significantly higher mean plasma concentrations of perfluorooctane sulfonate (PFOS), perfluorodecanoic acid (PFDA) and perfluoroundecanoic acid (PFUnA) than those affiliated with the SRE subarea. Dolphins affiliated with the ACW subarea were found to have a significantly higher mean plasma concentration of PFUnA than those affiliated with the CHS subarea. Further examination of the distribution of the PFCs revealed positive correlations with developed land uses and negative correlations with wetland/marsh land cover. A positive correlation was also observed between PFUnA and agricultural land use. The variability and scale of the observed contaminant burdens have important implications for the conservation and management of living marine resources and illustrates the importance of long-term monitoring of free-ranging wildlife species.