Reducing horizontal diffusion errors in σ-coordinate coastal ocean models with a second-order Lagrangian-interpolation finite-difference scheme

When a steep bottom slope exists, it is well known that conventional methods for calculating horizontal diffusion in sigma-coordinate coastal ocean models causes spurious transport (e.g. salinity, temperature, and sediments) and currents. In this study, a second-order accurate finite-difference algorithm and program have been developed to reduce the spurious numerical diffusion errors. In the proposed algorithm, the finite differencing is performed in the x-z coordinate system to approximate the horizontal gradient. Each variable in the finite differential formation is calculated in the sigma-coordinate grid cells using a second-order Lagrangian interpolation polynomial. In conjunction with a stepwise bottom boundary condition, numerical experiments show that the proposed finite-difference scheme considerably reduces numerical errors compared to conventional approaches when dealing with horizontal diffusion over steep topography, which often occurs in coastal oceans and navigation channels.     

Ecosystem management bioindicators: the ECOMAN project – a multi-biomarker approach to ecosystem management

The ECOMAN project was initiated from an awareness of the complexity of the functioning of coastal marine systems and the clear need for more pragmatic environmental assessment techniques linking environmental degradation with its causes. The aim of the project is to develop a suite of easy to use, cost effective and environmentally valid biological responses (biomarkers) to assess the general health of coastal systems, including estuaries. To achieve this aim, various sublethal endpoints are being measured and evaluated from a range of common coastal organisms showing different feeding types (filter feeding, grazing and predation) and habitat requirements (estuary and rocky shore) and at different levels of biological response (cellular, physiological and behavioural). This holistic integrated approach is essential to identify the full impact of chemical contamination on organisms, and enables the sensitivity of organisms to be ranked and key sentinel species for specific habitats to be identified.     

Biogeochemistry of southern Australian continental slope sediments

Sediment cores from the middle to lower slope of the southern continental margin of Australia between the Great Australian Bight and western Tasmania are compared in terms of marine and terrigenous input signals during the Holocene. The mass accumulation rates of carbonate, organic carbon, biogenic Ba, and Al are corrected for lateral sediment input (focusing), using the inventory of excess ²³⁰Th in the sediment normalised to its known production rate in the water column above each site. The biogenic signal is generally higher in the eastern part of the southern margin probably due to enhanced productivity associated with seasonal upwelling off southeastern South Australia and the proximity of the Subtropical Front, which passes just south of Tasmania. The input of Al, representing the terrigenous signal, is also higher in this region reflecting the close proximity of river runoff from the mountainous catchment of southeastern Australia. The distribution pattern of Mn and authigenic U, together with pore‐water profiles of Mn⁺⁺, indicate diagenetic reactions driven by the oxidation of buried organic carbon in an oxic to suboxic environment. Whereas Mn is reduced at depth and diffuses upwards to become immobilised in a Mn‐rich surface layer, U is derived from seawater and diffuses downward into the sediment, driven by reduction and precipitation at a depth below the reduction zone of Mn. The estimated removal rate of U from seawater by this process is within the range of U removal measured in hemipelagic sediments from other areas, and supports the proposition that hemipelagic sediments are a major sink of U in the global ocean. Unlike Mn, the depth profile of sedimentary Fe appears to be little affected by diagenesis, suggesting that little of the total Fe inventory in the sediment is remobilised and redistributed as soluble Fe.     

A Middle Devensian woolly rhinoceros (Coelodonta antiquitatis) from Whitemoor Haye Quarry,Staffordshire (UK): palaeoenvironmental context and significance

This paper reports the discovery of a rare partial skeleton of a woolly rhinoceros (Coelodonta antiquitatis Blumenbach, 1799) and associated fauna from a low Pleistocene terrace of the River Tame at Whitemoor Haye, Staffordshire, UK. A study of the sedimentary deposits around the rhino skeleton and associated organic‐rich clasts containing pollen, plant and arthropod remains suggests that the animal was rapidly buried on a braided river floodplain surrounded by a predominantly treeless, herb‐rich grassland. Highlights of the study include the oldest British chironomid record published to date and novel analysis of the palaeoflow regime using caddisfly remains. For the first time, comparative calculations of coleopteran and chironomid palaeotemperatures have been made on the same samples, suggesting a mean July temperature of 8–11 °C and a mean December temperature of between ?22 and ?16 °C. Radiocarbon age estimates on skeletal material, supported by optically stimulated luminescence ages from surrounding sediments, indicate that the rhino lived around 41–43 k cal a BP. The combined geochronological, stratigraphic and palaeoenvironmental evidence places the assemblage firmly within the Middle Devensian (Marine Oxygen Isotope Stage 3). This would agree with other regional evidence for the timing of aggradation for the lowest terrace of the Trent and its tributary systems. Copyright © 2012 John Wiley & Sons, Ltd.     

Statoliths

Statoliths, in modern cephalopods, are the paired calcareous ‘stones’ that lie in two adjacent cavities (or statocysts) within the cartilage of the head. The stones are generally 0.5–2.0 mm in length and appear to be formed of aragonite. Statoliths often co‐occur with fish otoliths, and being of similar appearance, size, colour, etc., this has caused confusion in the past. It was only towards the latter part of the twentieth century that it was recognized that statoliths could occur as fossils.     

The Fill–Spill Hydrology of Prairie Wetland Complexes during Drought and Deluge

The fill–spill of surface depressions (wetlands) results in intermittent surface water connectivity between wetlands in the prairie wetland region of North America. Dynamic connectivity between wetlands results in dynamic contributing areas for runoff. However, the effect of fill–spill and the resultant variable or dynamic basin contributing area has largely been disregarded in the hydrological community. Long‐term field observations recorded at the St. Denis National Wildlife Area, Saskatchewan, allow fill–spill in the basin to be identified and quantified. Along with historical water‐level observations dating back to 1968, recent data collected for the basin include snow surveys, surface water survey and production of a light detection and ranging–derived digital elevation model. Data collection for the basin includes both wet and dry antecedent basin conditions during spring runoff events. A surface water survey at St. Denis in 2006 reveals a disconnected channel network during the spring freshet runoff event. Rather than 100% of the basin contributing runoff to the outlet, which most hydrological models assume, only approximately 39% of the basin contributes to the outlet. Anthropogenic features, such as culverts and roads, were found to influence the extent and spatial distribution of contributing areas in the basin. Historical pond depth records illustrate the effect of antecedent basin conditions on fill–spill and basin contributing area. A large pond at the outlet of the St. Denis basin, which only receives local runoff during dry years when upstream surface storage has not been satisfied, has pond runoff volumes that increase by a factor of 20 or more during wet years when upstream antecedent basin surface storage is satisfied and basin‐wide runoff contributes to the pond. Copyright © 2011 John Wiley & Sons, Ltd.     

Tropical Pacific – mid-latitude teleconnections in medieval times

Terrestrial and marine late Holocene proxy records from the western and central US suggest that climate between approximately 500 and 1350 a.d. was marked by generally arid conditions with episodes of severe centennial-scale drought, elevated incidence of wild fire, cool sea surface temperatures (SSTs) along the California coast, and dune mobilization in the western plains. This Medieval Climate Anomaly (MCA) was followed by wetter conditions and warming coastal SSTs during the transition into the “Little Ice Age” (LIA). Proxy records from the tropical Pacific Ocean show contemporaneous changes indicating cool central and eastern tropical Pacific SSTs during the MCA, with warmer than modern temperatures in the western equatorial Pacific. This pattern of mid-latitude and tropical climate conditions is consistent with the hypothesis that the dry MCA in the western US resulted (at least in part) from tropically forced changes in winter NH circulation patterns like those associated with modern La Niña episodes. We examine this hypothesis, and present other analyses showing that the imprint of MCA climate change appears in proxy records from widely distributed regions around the planet, and in many cases is consistent with a cool medieval tropical Pacific. One example, explored with numerical model results, is the suggestion of increased westerlies and warmer winter temperatures over northern Europe during medieval times. An analog technique for the combined use of proxy records and model results, Proxy Surrogate Reconstruction (PSR), is introduced.     

Defining and detecting undesirable disturbance in the context of marine eutrophication

An understanding of undesirable disturbance to the balance of organisms is needed to diagnose marine eutrophication as defined by EU Directives and OSPAR. This review summarizes the findings of the UK Defra-funded Undesirable Disturbance Study Team, which concluded that 'an undesirable disturbance is a perturbation of a marine ecosystem that appreciably degrades the health or threatens the sustainable human use of that ecosystem'. A methodology is proposed for detecting disturbance of temperate salt-water communities dominated by phytoplanktonic or phytobenthic primary producers. It relies on monitoring indicators of ecosystem structure and vigour, which are components of health. Undesirable disturbance can be diagnosed by accumulating evidence of ecohydrodynamic type-specific changes in: (i) bulk indicators; (ii) frequency statistics; (iii) flux measurements; (iv) structural indicators; and (v) indicator species. These are exemplified by (i) chlorophyll, transparency, dissolved oxygen, and opportunistic seaweed cover; (ii) HABs frequency; (iii) primary production; (iv) benthic and planktonic 'trophic indices'; (v) seagrasses and Nephrops norvegicus. Ecological Quality Objectives are proposed for some of these. Linking the diagnosis to eutrophication requires correlation of changes with nutrient enrichment. The methodology, which requires the development of a plankton community index and emphasizes the importance of primary production as an indicator of vigour, can be harmonized with the EU Water Framework Directive and OSPAR's Strategy to Combat Eutrophication.     

Assessing the impact of nutrient enrichment in estuaries: susceptibility to eutrophication

The main aim of this study was to develop a generic tool for assessing risks and impacts of nutrient enrichment in estuaries. A simple model was developed to predict the magnitude of primary production by phytoplankton in different estuaries from nutrient input (total available nitrogen and/or phosphorus) and to determine likely trophic status. In the model, primary production is strongly influenced by water residence times and relative light regimes. The model indicates that estuaries with low and moderate light levels are the least likely to show a biological response to nutrient inputs. Estuaries with a good light regime are likely to be sensitive to nutrient enrichment, and to show similar responses, mediated only by site-specific geomorphological features. Nixon's scale was used to describe the relative trophic status of estuaries, and to set nutrient and chlorophyll thresholds for assessing trophic status. Estuaries identified as being eutrophic may not show any signs of eutrophication. Additional attributes need to be considered to assess negative impacts. Here, likely detriment to the oxygen regime was considered, but is most applicable to areas of restricted exchange. Factors which limit phytoplankton growth under high nutrient conditions (water residence times and/or light availability) may favour the growth of other primary producers, such as macrophytes, which may have a negative impact on other biological communities. The assessment tool was developed for estuaries in England and Wales, based on a simple 3-category typology determined by geomorphology and relative light levels. Nixon's scale needs to be validated for estuaries in England and Wales, once more data are available on light levels and primary production.     

On the relationship between instability and Lyapunov times for the three-body problem

In this study we consider the relationship between the survival time and the Lyapunov time for three-body systems. It is shown that the Sitnikov problem exhibits a two-part power-law relationship as demonstrated by Mikkola & Tanikawa for the general three-body problem. Using an approximate Poincaré map on an appropriate surface of section, we delineate escape regions in a domain of initial conditions and use these regions to analytically obtain a new functional relationship between the Lyapunov time and the survival time for the three-body problem. The marginal probability distributions of the Lyapunov and survival times are discussed and we show that the probability density function of Lyapunov times for the Sitnikov problem is similar to that for the general three-body problem.