Estimating chlorophyll content of crops from hyperspectral data using a normalized area over reflectance curve (NAOC)

The Normalized Area Over reflectance Curve (NAOC) is proposed as a new index for remote sensing estimation of the leaf chlorophyll content of heterogeneous areas with different crops, different canopies and different types of bare soil. This index is based on the calculation of the area over the reflectance curve obtained by high spectral resolution reflectance measurements, determined, from the integral of the red–near-infrared interval, divided by the maximum reflectance in that spectral region. For this, use has been made of the experimental data of the SPARC campaigns, where in situ measurements were made of leaf chlorophyll content, LAI and fCOVER of 9 different crops – thus, yielding 300 different values with broad variability of these biophysical parameters. In addition, Proba/CHRIS hyperspectral images were obtained simultaneously to the ground measurements. By comparing the spectra of each pixel with its experimental leaf chlorophyll value, the NAOC was proven to exhibit a linear correlation to chlorophyll content. Calculating the correlation between these variables in the 600–800 nm interval, the best correlation was obtained by computing the integral of the spectral reflectance curve between 643 and 795 nm, which practically covers the spectral range of maximum chlorophyll absorption (at around 670 nm) and maximum leaf reflectance in the infrared (750–800 nm). Based on a Proba/CHRIS image, a chlorophyll map was generated using NAOC and compared with the land-use (crops classification) map. The method yielded a leaf chlorophyll content map of the study area, comprising a large heterogeneous zone. An analysis was made to determine whether the method also serves to estimate the total chlorophyll content of a canopy, multiplying the leaf chlorophyll content by the LAI. To validate the method, use was made of the data from another campaign ((SEN2FLEX), in which measurements were made of different biophysical parameters of 7 crops, and hyperspectral images were obtained with the CASI imaging radiometer from an aircraft. Applying the method to a CASI image, a map of leaf chlorophyll content was obtained, which on, establishing comparisons with the experimental data allowed us to estimate chlorophyll with a root mean square error of 4.2 μg/cm², similar or smaller than other methods but with the improvement of applicability to a large set of different crop types.     

Every single street? Rethinking full coverage across street‐level imagery platforms

Street‐level images taken by vehicles and pedestrians have found a role in various companies’ location‐based intelligence services. Some platforms collect their images using their own cars and drivers, while others rely on crowdsourcing; however, to what extent can we expect crowdsourced approaches to reach the imagery coverage levels obtained by paid drivers? Is capturing every single street a useful or obtainable goal? We use online coverage maps to compare Google Street View, Mapillary, and OpenStreetCam in 24 major world cities and 25 differently sized cities in Brazil. We find that Google has often taken an all‐or‐nothing approach to collecting coverage in world cities, whereas crowdsourced platforms have achieved a more even distribution of coverage across space. Extremely low‐ and high‐income neighborhoods are sometimes omitted due to visible and invisible barriers. Coverage patterns are influenced by how and why each company procures imagery, along with other social, economic, and geographic factors.     

Metazoan parasite communities of Selar crumenophthalmus and Decapterus muroadsi (Pisces: Carangidae) from Mexican Pacific coasts

Metazoan parasites communities of marine fishes can include both adults and larval stages of several endoparasite groups that use fishes as intermediate or paratenic hosts. The richness and abundance of parasite species larvae that harbour a fish species can therefore be a good indicator of that species’ role as an intermediate host to endoparasite species.

The parasite communities of two small carangid fishes (Selar crumenophthalmus and Decapterus muroadsi) from Mexican Pacific coasts were quantified and analysed. Five hundred sixty-three carangids (S. crumenophthalmus, n?=?402; and D. muroadsi, n?=?161) were collected between April 2014 and April 2018 from three locations. Twenty-four metazoan parasite species were identified in both hosts: five species of Monogenea (adults), eight of Digenea (7 adults and 1 metacercaria), two of Cestoda (larvae), two of Nematoda (one adult and one larva), two of Acanthocephala (adults), and five of Copepoda. Larval helminths numerically dominated the endoparasite communities of both hosts, suggesting that these carangids are important intermediate hosts for several parasite species. Component parasite community richness and species composition differed between hosts, locations, and sampling years. Variations in host feeding behaviour, and body size were considered as important factors influencing these differences.     

Gas flux and carbonate occurrence at a shallow seep of thermogenic natural gas

The Coal Oil Point seep field located offshore Santa Barbara, CA, consists of dozens of named seeps, including a peripheral ～200 m² area known as Brian Seep, located in 10 m water depth. A single comprehensive survey of gas flux at Brian Seep yielded a methane release rate of ～450 moles of CH₄ per day, originating from 68 persistent gas vents and 23 intermittent vents, with gas flux among persistent vents displaying a log normal frequency distribution. A subsequent series of 33 repeat surveys conducted over a period of 6 months tracked eight persistent vents, and revealed substantial temporal variability in gas venting, with flux from each individual vent varying by more than a factor of 4. During wintertime surveys sediment was largely absent from the site, and carbonate concretions were exposed at the seafloor. The presence of the carbonates was unexpected, as the thermogenic seep gas contains 6.7% CO₂, which should act to dissolve carbonates. The average δ¹³C of the carbonates was ?29.2?±?2.8‰ VPDB, compared to a range of ?1.0 to +7.8‰ for CO₂ in the seep gas, indicating that CO₂ from the seep gas is quantitatively not as important as ¹³C-depleted bicarbonate derived from methane oxidation. Methane, with a δ¹³C of approximately ?43‰, is oxidized and the resulting inorganic carbon precipitates as high-magnesium calcite and other carbonate minerals. This finding is supported by ¹³C-depleted biomarkers typically associated with anaerobic methanotrophic archaea and their bacterial syntrophic partners in the carbonates (lipid biomarker δ¹³C ranged from ?84 to ?25‰). The inconsistency in δ¹³C between the carbonates and the seeping CO₂ was resolved by discovering pockets of gas trapped near the base of the sediment column with δ¹³C-CO₂ values ranging from ?26.9 to ?11.6‰. A mechanism of carbonate formation is proposed in which carbonates form near the sediment–bedrock interface during times of sufficient sediment coverage, in which anaerobic oxidation of methane is favored. Precipitation occurs at a sufficient distance from active venting for the molecular and isotopic composition of seep gas to be masked by the generation of carbonate alkalinity from anaerobic methane oxidation.

Interannual variability of wave climate in the Caribbean Sea

Ocean Dynamics - Low-frequency interannual climatic oscillations have been reported to influence the precipitation regimes, river discharges, winds, and sea level in the Caribbean Sea. Here, we...     

Hidden in plain sight: How finding a lake in the Brazilian Pantanal improves understanding of wetland hydrogeomorphology

Wetlands are permanently or seasonally flooded areas which support countless species of plants and animals. The Pantanal, in central-west Brazil is one of the largest freshwater wetlands in the world covering an area of ~150 000 km². The relationships between geomorphology, hydrology, sedimentation, and vegetation cover are critical for understanding how the landscape constrains the dynamics of wetlands. We provide a detailed study of the geomorphology and surface hydrology of the Negro River Interfan System (NRIS), in the southern Pantanal, by applying multiple approaches (i.e. remote sensing analysis, geomorphological zonation and hydrosedimentological surveys). A multitemporal analysis of Landsat imagery produced an inundation frequency map (2000–2011 period) that revealed a permanently flooded area in the central portion of the NRIS. A hidden fluvial lake was previously undetected due to the accumulation of floating mats and floating meadows of macrophytes. The Negro and Aquidauana feeder rivers exhibit remarkable differences in channel planform, water discharge, and sediment load. The Negro River presents a distributary pattern with marginal levees with decreasing elevation as it progrades into the lake and remains as a subaqueous landform conditioning the water flow downstream. The lake outflow to the Paraguay River occurs mainly by sheet flow during flood seasons and through small tributary channels during dry months. The lake's geometry is outlined by east–northeast and west–northwest straight borders, suggesting that the area is tectonically controlled. A cloud-based worldwide water surface database (1984–2015) revealed frequent channel changes within the NRIS. Recent channel avulsions in the lower course of the Negro River are noteworthy mainly because the former river channel at the confluence with the Paraguay River is no longer connected with the Negro River channel. © 2019 John Wiley & Sons, Ltd.     

The δ Scuti star 38 o1 Eri

We present and discuss 247 high dispersion échelle spectra of the δ Scuti star 38 o ¹ Eri. We find at least three periods, but all are affected by aliasing problems. We attempt to identify the modes by a technique involving both temporal and spatial pre-whitening. All modes are of high degree, probably ℓ≈4 and ℓ≈7.     

Tropical Cyclone Impacts on Coastal Regions: the Case of the Yucatán and the Baja California Peninsulas,Mexico

Tropical cyclones (TCs) are large-scale natural disturbances that generate strong winds and heavy rainfall, impacting coastal and inland environments. TCs also influence biogeochemical and hydrological cycles controlling aquatic primary productivity in tropical and subtropical coastal ecosystems. We assessed TC landfall activity and identified sites along the Mexican east and west coasts with high frequency in the period 1970–2010 and evaluated TCs with significant precipitation. Changes in chlorophyll-a (Chl-a) concentrations before and after storm impacts were estimated using remotely sensed ocean color. There were 1,065 named TCs with a wide diversity in tracks. Three states with the highest number of landfalls were identified: Baja California Sur and Sinaloa on the west coast and Quintana Roo on the east coast. While a relative increase in Chl-a values following TC landfalls in the Baja California and Yucatán Peninsula regions appeared to be strongly linked to TC strength, the intensity of precipitation, the spatial scales of the two peninsulas, and the relative movement of TCs appeared to have contributed to Chl-a variability. Satellite estimates of Chl-a in the nearshore coastal waters following TC passage were likely enhanced by coastal morphology and water discharge along with constituents such as suspended particulate, colored dissolved organic matter and nutrients from rivers, tributaries, and groundwater.     

Stable isotope analysis of carbon cycling in the Perdido estuary, Florida

Stable carbon isotope (δ¹³C) analysis was used in the Peridido Estuary, Florida U.S. to determine the predominant carbon source that supports the bacterial assemblage. Stable carbon isotope values were measured in the suspended particulate matter (SPM), dissolved organic and inorganic matter, and bacteria. Stable nitrogen isotope (δ¹⁵N) ratios were measured in SPM and nitrate to assist in understanding carbon cycling through the estuary. Analyses were conducted on samples from riverine, coastal, and anthropogenic sources and compared with samples from the bay. Stable isotope ratio analysis was coupled with estimates of mixing of riverine and coastal waters into the bay. Preliminary observation of the °¹³C data indicates that terrestrial organic matter is the primary carbon source that is assimilated by bacteria in the ecosystem. Stable isotope data from carbon and nitrogen pools in combination with analysis of estuarine current velocities indicates that primary production is an important factor in the carbon cycle. This study demonstrates the importance of stable isotope analysis of multiple carbon and nitrogen pols to assess sources and cycling of organic matter.