Diatoms grow faster using ammonium in rapidly flushed eutrophic Dokai Bay,Japan

The importance of the nitrogen source for phytoplankton growth in a highly eutrophic embayment, Dokai Bay, was investigated. The DIN concentration often exceeded 100 μM of which 40–70% was NH₄ ⁺. During two incubation experiments, the natural assemblage of mainly diatoms took up NH₄ ⁺ instead of NO₃ ⁻. The growth of two Skeletonema species isolated in Dokai Bay were significantly faster on NH₄ ⁺ (1.86 and 1.27 div. d⁻¹ respectively) than on NO₃ ⁻ (1.55 and 1.04 div. d⁻¹ respectively). Our results indicated that these diatoms could grow faster by using NH₄ ⁺ compared to NO₃ ⁻ in this eutrophic bay.     

Stochastic evaluation of fluvial to marginal marine sealing facies

Hydrocarbon top seal analyses are particularly difficult in fluvial and marginal marine settings. Although these settings often contain beds comprised of a low-permeability, clay-rich lithology associated with high quality seals, their presence does not guarantee an effective seal because individual beds within the stratal unit may be laterally discontinuous. Lateral facies changes, truncation of fine-grained beds, or the presence of crevasse splays may provide cross-stratal migration pathways, reducing the effective sealing capacity to a magnitude less than the closure height.     

A control-volume finite-element method for three-dimensional multiphase basin modeling

In this paper we describe a 3D control-volume finite-element method to solve numerically the coupled partial differential equations (PDEs) governing geological processes involved in the evolution of sedimentary basins. These processes include sediment deposition and deformation, hydrocarbon generation, multiphase fluid flow, and heat transfer in deforming porous media.     

Extension of a qualitative model on nutrient cycling and transformation to include microtidal estuaries on wave-dominated coasts: Southern hemisphere perspective

Estuaries are dynamic transition zones acting as filters and transformers of nutrients passing from catchments to the sea. We propose an extension to an existing southern hemisphere model on nutrient dynamics in estuaries to include the relatively constricted, microtidal estuaries located along wave-dominated coasts in the region, specifically focusing on the limiting macronutrients nitrogen (N) and phosphorus (P) and on key processes, including physical (e.g. flushing, mixing and sedimentation), geochemical (e.g. flocculation), biochemical (e.g. remineralisation) and biological (e.g. primary production) processes. A simplified model of the physical states (primarily controlled by hydrological characteristics) is used as the basis for the qualitative model, where these are defined in terms of characteristic salinity-induced stratification of the water column, flushing time and the mouth condition. Four physical states are identified: a freshwater-dominated state, freshwater pulsed/recovery state, marine-dominated state and the closed mouth state. The states and their physical characteristics largely resemble that of the earlier model, except that the extended model reflects the dynamics of restricted inlets and introduces the closed mouth state. This model specifically explores the variation within southern African estuarine systems to better inform research and management programmes on the appropriate trophic, temporal and spatial scales at which uncertainties in ecosystem functioning need resolving. It can also be applied to other regions in the southern hemisphere, and even the northern hemisphere, with similar hydrological and estuarine geomorphological characteristics (e.g. the Mediterranean coast, the west coasts of North and South America, and the south-west and south-eastern coasts of Australia).     

Economic gains of liberalising access to fishing quotas within the European Union

This paper analyses the extent to which specialisation gains can be achieved by liberalising access to fishing quotas within the European Union (EU). Fishing quotas are today exchanged between EU member states at a rate of 4% of total turnover in EU fisheries. Germany, Belgium, Denmark and the Netherlands are the most active. Only one fourth of these exchanges are permanent. With the management systems in EU fisheries differing among countries, comparative advantages in fisheries exist in member states with the best management practices. Hence, although positive but small specialisation gains exist in EU fisheries today, these gains might potentially be increased by liberalising access to fishing quotas and allowing transferability of quotas between individuals from different countries on a permanent basis. Increasing the gains might, however, affect relative stability.     

Higher harmonics induced by a submerged horizontal plate and a submerged rectangular step in a wave flume

The decomposition of a monochromatic wave over a submerged plate is investigated experimentally in a wave flume. Bound and free higher harmonic modes propagating upstream and downstream the structure are discriminated by means of moving resistive probes. The first-order analysis shows a resonant behaviour linked to the ratio of the plate's width and the fundamental mode wavelength over the plate. The second-order analysis shows an energy transfer from the fundamental mode towards free harmonics propagating downstream the structure. This transfer is linked to the ratio of the width of the plate and the bound harmonic wavelength over the plate. We also performed experiments with a submerged step to compare the efficiency of both structures. The submerged plate is shown to be a more efficient breakwater than the step, at the first as well as the second-order.     

Fundamental study for morphodynamic modelling: Sand mounds in oscillatory flows

Experiments on sand mounds in oscillatory flow, undertaken in controlled, large-scale laboratory conditions, have produced well-defined data sets for model comparison. Three bathymetries with different levels of submergence, including a surface-piercing case, were tested. The maximum slope was about 1:5.5. Sediment transport is due to bed load with ripple formation. The principal time-dependent bulk parameters are the vertical distance of the centre of gravity above the base and the volume of the mound. A semi-implicit finite-volume depth-averaged hydrodynamic model is used to drive morphodynamics, using van Rijn's sediment flux model generalized to take account of bed slope, and some justification is given for depth-averaged modeling in these conditions. Starting the model runs with the conditions at the end of the first cycle avoided initial atypical physical behaviour. In general good predictions were obtained with an angle of repose reduced from the standard value of about 30° for stationary beds to 15°. For these situations, morphodynamics was largely unaffected by a hydrodynamic roughness height in the range 2.5D₅₀ to 51D₅₀, with larger values accounting for ripple roughness. The reduced angle of repose may be physically expected with mobile beds but this specific value is only expected to be suited to this form of bed motion. In one case an exaggerated ripple formed near the top of the mound reducing agreement with experiment. For the submerged case with normal ripple structure excellent predictions were obtained. For the initially surface-piercing mound, the time of submergence was better predicted with a 30° angle of repose, presumably due to the prominent influence of the near stationary bed near the wet/dry interface, although long term predictions were better predicted with 15°. The occurrence of vortex shedding in the first cycle modeled was in agreement with experimental observation.     

Bioaccumulation and trophic transfer of mercury in striped bass (Morone saxatilis) and tautog (Tautoga onitis) from the Narragansett Bay (Rhode Island,USA)

We examined the bioaccumulation and trophic transfer of mercury in two marine finfish species, striped bass (Morone saxatilis) and tautog (Tautoga onitis), collected from the Narragansett Bay (Rhode Island, USA). For each of these target fish, white muscle tissue was analyzed for total mercury (Hg) and results were evaluated relative to fish age, body size, and Hg content of preferred prey. Dietary and stable isotope analysis was also used to elucidate the effect of trophic processes on Hg concentrations in fish. The Hg content of muscle tissue was positively correlated with fish age and length for both species, although striped bass accumulated Hg faster than tautog. Accelerated Hg bioaccumulation in striped bass is consistent with its high trophic level (trophic level = 4.07) and Hg-enriched prey (forage fish and macrocrustaceans; mean Hg content = 0.03 mg Hg kg wet wt^?1). In contrast, tautog maintain a lower trophic status (trophic level = 3.51) and consume prey with lower Hg levels (mussels and crabs; mean Hg content = 0.02 mg Hg kg wet wt^?1). Despite differences in Hg bioaccumulation between target fish, the mean Hg concentration of tautog exceeded levels in striped bass (0.24 and 0.16 mg Hg kg wet wt^?1, respectively) due to a disparity in age-at-catch between sampled groups (mean age of tautog and bass = 11.3 and 4.3 yr, respectively). Taking into account legal minimum catch lengths further revealed that 75.0% of legal-size striped bass (>70.2 cm TL; n = 4) and 44.8% of tautog (>40.6 cm TL; n = 29) had Hg levels beyond the US EPA regulatory threshold of 0.3 mg Hg kg wet wt^?1. Moreover, Hg-length relationships suggest that each target fish meets this threshold near their minimum legal catch length. Our findings reiterate the value of species ecology to improve predictions of fish Hg and permit better management of human contamination by this important dietary source.     

Influence of environmental and prey variables on low tide shorebird habitat use within the Robbins Passage wetlands,Northwest Tasmania

Shorebirds feed primarily on tidal flats, and their distribution over these flats is influenced by their prey and abiotic factors. These factors act by influencing the distribution and abundance of the prey, or the shorebirds ability to exploit it. The aims of this study were to investigate the low tide foraging distribution of shorebirds at four sites within the Robbins Passage wetlands, and the environmental and invertebrate factors that may influence their distribution. The greatest densities and number of shorebirds were found at Shipwreck Point and East Inlet. The shorebirds within-site distribution was also non-random, with the shorebirds present in greatest densities at the water's edge and low intertidal stratum, although this varied among species. Generally, on a small spatial scale, invertebrate diversity was positively correlated, and seagrass leaf mass was negatively correlated, with shorebird feeding density. On a large spatial scale, invertebrate biomass and seagrass root mass were positively correlated with shorebird feeding density. Invertebrate biomass and seagrass root mass explained 71% of the variance in total shorebird feeding density on the tidal flats. The variation in shorebird feeding density and diversity was therefore partly explained by invertebrate diversity and biomass, as well as the environmental factors seagrass roots and leaf mass and tidal flat area, although the strength of these relationships was influenced by the two different spatial scales of the study. The strength of the relationships between shorebird feeding density and the invertebrate and environmental variables was stronger on a large spatial scale. The presence of seagrass may have influenced shorebird-feeding density by affecting the invertebrate abundance and composition or the shorebirds ability to detect and capture their prey. The area of the tidal flat had opposing effects on the shorebird species. These results can be used to assist in the development of management plans for the Robbins Passage wetlands and the conservation of important shorebird areas.     

The effect of a topographic high on the morphological stability of a two-inlet bay system

The cross-sectional stability of two tidal inlets connecting the same back-barrier lagoon to the ocean is investigated. The condition for equilibrium is the cross-sectional area tidal prism relationship. In an earlier study [Van de Kreeke, J., 1990. Can multiple inlets be stable? Estuarine, Coastal and Shelf Science 30: 261–273.], using the same equilibrium condition, it was concluded that where two inlets connect the same basin to the ocean ultimately one inlet will close. One of the major assumptions in that study was that the water level in the basin fluctuated uniformly. In hindsight this assumption might be too restrictive. For example, in the Wadden Sea the back barrier lagoon consists of a series of basins, rather than one single basin, separated by topographic highs. These topographic highs limit but do not exclude the exchange of water between the sub-basins. For this reason in the present study, a topographic high in the form of a weir was added, separating the back-barrier lagoon in two sub-basins. The water level in the sub-basins, rather than in the back-barrier as a whole, is assumed to fluctuate uniformly. For this schematization the hydrodynamic equations are solved using a finite difference method. The results, together with the equilibrium condition, yield the equilibrium flow curve for each of the inlets. The intersections of the two equilibrium flow curves represent combinations of cross-sectional areas for which both inlets are in equilibrium. The stability of the equilibriums was investigated using a non-linear stability analysis resulting in a flow diagram. Calculations were carried out for different inlet and weir characteristics. Sinussoidal tides were the same for both inlets. The results show that for relatively large wetted cross-sectional areas over the topographic high, approaching the situation of a single basin, there are no combinations of inlet cross-sectional areas for which both inlets are in a stable equilibrium. This supports the conclusion in the earlier study. For relatively small wetted cross-sectional areas over the topographic high there is one set of stable equilibriums. In that case the two-inlet bay system approaches that of two single-inlet bay systems.