The visualization of turbulence data using a wavelet‐based method

This technical communication presents some MATLAB^® routines for visualizing the structure in turbulent signals based on a standard conditional averaging and thresholding approach. Up to three velocity components may be analysed and the resulting output highlights the time at which important flow events occur as well as the frequency levels that contribute the greatest energy to this particular event. The latter information is derived from a wavelet decomposition of the signal and may assist in providing a process‐based explanation of observed flow features. Copyright © 2006 John Wiley & Sons, Ltd.     

Modeling the mesoscale variability in the Adriatic Sea

A new high-resolution (<2 km) version of the DieCAST fourth-accuracy-order model for the ocean circulation is proposed for the study of the general circulation, mesoscale structures, and their variability in the Adriatic Sea. The model uses mean seasonal data on the temperature, salinity, buoyancy fluxes, and wind. The data of the COAMPS system with a 4-km resolution were used for the simulation of the sea response to the effects of various winds: Sirocco, Maestro, and two types of boras. The mean monthly runoffs from 38 rivers and mean daily runoffs from 12 main rivers throughout the year were given in the model. The conditions at the open boundary of the Strait of Otranto were given on the basis of the hierarchy of two coarser models for the Adriatic and Mediterranean seas. Due to the extremely weak dissipation and the high resolution (the mesh size is less than the baroclinic radius of deformation, 5–10 km), the model allows one to trace the development of a baroclinic instability along the Italian coast, to simulate mesoscale structures associated with the instability, and to estimate the scales of the structures. Mesoscale filaments, meanders, mushroom-like currents, fronts, and intrusions known from satellite observations were simulated and explained. The scenario of the anomalous upwelling near the Italian coast observed in the summer of 2003 was also simulated and analyzed.     

The Hadley circulation: assessing NCEP/NCAR reanalysis and sparse in-situ estimates

 We present a comparison of the zonal mean meridional circulations derived from monthly in situ data (i.e. radiosondes and ship reports) and from the NCEP/NCAR reanalysis product. To facilitate the interpretation of the results, a third estimate of the mean meridional circulation is produced by subsampling the reanalysis at the locations where radiosonde and surface ship data are available for the in situ calculation. This third estimate, known as the subsampled estimate, is compared to the complete reanalysis estimate to assess biases in conventional, in situ estimates of the Hadley circulation associated with the sparseness of the data sources (i.e., radiosonde network). The subsampled estimate is also compared to the in situ estimate to assess the biases introduced into the reanalysis product by the numerical model, initialization process and/or indirect data sources such as satellite retrievals. The comparisons suggest that a number of qualitative differences between the in situ and reanalysis estimates are mainly associated with the sparse sampling and simplified interpolation schemes associated with in situ estimates. These differences include: (1) a southern Hadley cell that consistently extends up to 200 hPa in the reanalysis, whereas the bulk of the circulation for the in situ and subsampled estimates tends to be confined to the lower half of the troposphere, (2) more well-defined and consistent poleward limits of the Hadley cells in the reanalysis compared to the in-situ and subsampled estimates, and (3) considerably less variability in magnitude and latitudinal extent of the Ferrel cells and southern polar cell exhibited in the reanalysis estimate compared to the in situ and subsampled estimates. Quantitative comparison shows that the subsampled estimate, relative to the reanalysis estimate, produces a stronger northern Hadley cell (∼20%), a weaker southern Hadley cell (∼20–60%), and weaker Ferrel cells in both hemispheres. These differences stem from poorly measured oceanic regions which necessitate significant interpolation over broad regions. Moreover, they help to pinpoint specific shortcomings in the present and previous in situ estimates of the Hadley circulation. Comparisons between the subsampled and in situ estimates suggest that the subsampled estimate produces a slightly stronger Hadley circulation in both hemispheres, with the relative differences in some seasons as large as 20–30%. 6These differences suggest that the mean meridional circulation associated with the NCEP/NCAR reanalysis is more energetic than observations suggest. Examination of ENSO-related changes to the Hadley circulation suggest that the in situ and subsampled estimates significantly overestimate the effects of ENSO on the Hadley circulation due to the reliance on sparsely distributed data. While all three estimates capture the large-scale region of low-level equatorial convergence near the dateline that occurs during El Nino, the in situ and subsampled estimates fail to effectively reproduce the large-scale areas of equatorial mass divergence to the west and east of this convergence area, leading to an overestimate of the effects of ENSO on the zonal mean circulation. Received: 16 September 1998 / Accepted: 22 April 1999     

Stationary magnetospheric convection on November 24, 1981. 1. A case study of “pressure gradient/minimum-B” auroral arc generation

We present two case studies in the night and evening sides of the auroral oval, based on plasma and field measurements made at low altitudes by the AUREOL-3 satellite, during a long period of stationary magnetospheric convection (SMC) on November 24, 1981. The basic feature of both oval crossings was an evident double oval pattern, including (1) a weak arc-type structure at the equatorial edge of the oval/polar edge of the diffuse auroral band, collocated with an upward field-aligned current (FAC) sheet of ≈1.0 μA m⁻², (2) an intermediate region of weaker precipitation within the oval, (3) a more intense auroral band at the polar oval boundary, and (4) polar diffuse auroral zone near the polar cap boundary. These measurements are compared with the published magnetospheric data during this SMC period, accumulated by Yahnin et al. and Sergeev et al., including a semi-empirical radial magnetic field profile B_Z in the near-Earth neutral sheet, with a minimum at about 10–14 R_E. Such a radial B_Z profile appears to be very similar to that assumed in the “minimum B/cross-tail line current” model by Galperin et al. (GVZ92) as the “root of the arc”, or the arc generic region. This model considers a FAC generator mechanism by Grad-Vasyliunas-Boström-Tverskoy operating in the region of a narrow magnetic field minimum in the near-Earth neutral sheet, together with the concept of ion non-adiabatic scattering in the “wall region”. The generated upward FAC branch of the double sheet current structure feeds the steady auroral arc/inverted-V at the equatorial border of the oval. When the semi-empirical B_Z profile is introduced in the GVZ92 model, a good agreement is found between the modelled current and the measured characteristics of the FACs associated with the equatorial arc. Thus the main predictions of the GVZ92 model concerning the “minimum-B” region are consistent with these data, while some small-scale features are not reproduced. Implications of the GVZ92 model are discussed, particularly concerning the necessary conditions for a substorm onset that were not fulfilled during the SMC period.     

Biogeochemical cycles of carbon, sulfur, and free oxygen in a microbial mat

Complete budgets for carbon and oxygen have been constructed for cyanobacterial mats dominated by Microcoleus chthonoplastes from the evaporating ponds of a salt works located in Guerrero Negro, Baja California Sur, Mexico. Included in the budget are measured rates of O2 production, sulfate reduction, and elemental exchange across the mat/brine interface, day and night, at various temperatures and times of the year. We infer from this data the various sinks for O2, as well as the sources of carbon for primary production. To summarize, although seasonal variability exists, a major percentage of the O2 produced during the day did not diffuse out of the mat but was used within the mat to oxidize both organic carbon and the sulfide produced by sulfate reduction. At night, most of the O2 that diffused into the mat was used to oxidize sulfide, with O2 respiration of minor importance. During the day, the internal mat processes of sulfate reduction and O2 respiration generated as much or more inorganic carbon (DIC) for primary production as diffusion into the mat. Also, oxygenic photosynthesis was the most important process of carbon fixation, although anoxygenic photosynthesis may have been important at low light levels during some times of the year. At night, the DIC lost from the mat was mostly from sulfate reduction. Elemental fluxes across the mat/brine interface indicated that carbon with an oxidation state of greater than zero was taken up by the mat during the day and liberated from the mat at night. Overall, carbon with an average oxidation state of near zero accumulated in the mat. Both carbon fixation and carbon oxidation rates varied with temperature by a similar amount. These mats are thus closely coupled systems where rapid rates of photosynthesis both require and fuel rapid rates of heterotrophic carbon oxidation.     

On the use of IPCC-class models to assess the impact of climate on Living Marine Resources

The study of climate impacts on Living Marine Resources (LMRs) has increased rapidly in recent years with the availability of climate model simulations contributed to the assessment reports of the Intergovernmental Panel on Climate Change (IPCC). Collaboration between climate and LMR scientists and shared understanding of critical challenges for such applications are essential for developing robust projections of climate impacts on LMRs. This paper assesses present approaches for generating projections of climate impacts on LMRs using IPCC-class climate models, recommends practices that should be followed for these applications, and identifies priority developments that could improve current projections. Understanding of the climate system and its representation within climate models has progressed to a point where many climate model outputs can now be used effectively to make LMR projections. However, uncertainty in climate model projections (particularly biases and inter-model spread at regional to local scales), coarse climate model resolution, and the uncertainty and potential complexity of the mechanisms underlying the response of LMRs to climate limit the robustness and precision of LMR projections. A variety of techniques including the analysis of multi-model ensembles, bias corrections, and statistical and dynamical downscaling can ameliorate some limitations, though the assumptions underlying these approaches and the sensitivity of results to their application must be assessed for each application. Developments in LMR science that could improve current projections of climate impacts on LMRs include improved understanding of the multi-scale mechanisms that link climate and LMRs and better representations of these mechanisms within more holistic LMR models. These developments require a strong baseline of field and laboratory observations including long time series and measurements over the broad range of spatial and temporal scales over which LMRs and climate interact. Priority developments for IPCC-class climate models include improved model accuracy (particularly at regional and local scales), inter-annual to decadal-scale predictions, and the continued development of earth system models capable of simulating the evolution of both the physical climate system and biosphere. Efforts to address these issues should occur in parallel and be informed by the continued application of existing climate and LMR models.     

Feeding Habits of Trisopterus minutus capelanus (Gadidae) Off the Eastern Coast of Spain (Western Mediterranean)

Abstract. The stomach contents of poor cod, Trisopterus minutus capelanus (Lacepède), were taken at monthly intervals off the eastern coast of the Gulf of Valencia (Spain). A total of 1276 were analyzed to determine diet according to fish size and season. The basic food consists of crustaceans (Mysidacea and Decapoda) and teleosts. Feeding habits varied with size: decapods and fishes were more abundant in the stomachs of larger specimens. Little seasonal variation in food habits was recorded.