Geochemical characteristics of Tertiary Sagara oil from an active forearc basin, Shizuoka, Japan

Abstract   The Sagara oil field is located in the Neogene Kakegawa Basin, close to the Izu collision zone at the junction between the main Japanese Islands and the Izu–Bonin Arc. The Sagara oil field is one of the few oil fields situated in a forearc basin on the Pacific side of Japan and is present in a sedimentary basin with poor oil-generating potential. Several crude oils from Sagara oil field were investigated to infer their origin. Organic geochemical characteristics of Sagara oils showed the influences of light biodegradation, migration-contamination, and migration-fractionation. The maturity levels of Sagara oils evaluated based on abundant alkylnaphthalenes corresponded to 0.9–1.2% vitrinite reflectance. Sagara oils were characterized by significant amounts of higher plant biomarkers, a high pristane/phytane ratio and an absence of organic sulphur compounds, suggesting a siliciclastic source rock deposited under nearshore to fluvial–deltaic environments. Numerous faults and fractures in the active forearc basin provided excellent conduits and facilitated upward migration of light hydrocarbons generated at greater depth in the Kakegawa Basin.     

Short-range prediction experiments of the Kuroshio path variabilities south of Japan

Assimilation and prediction experiments of the Kuroshio path variability south of Japan were conducted to investigate the predictability of the Kuroshio path. The assimilation and prediction system is composed of an eddy-resolving model and a three-dimensional variational analysis scheme with vertical coupled temperature–salinity empirical orthogonal function modes. The sea surface height (SSH) variability and the variations of the Kuroshio path of the assimilation fields are in good agreement with those observed. The results of the assimilation are then used as the initial conditions for 138 cases of 90-day prediction experiments conducted from 1993 to 2004. The predictive limit of our system is assessed by the SSH anomaly in the assimilation field and is found to be around 40–60 days, which is much longer than that of the persistence. The prediction results show good performance in the transition stage from a straight to a meandering path. For example, a large meandering event that occurred in August 2004 is successfully predicted in a 2-month forecast. Two types of failure cases are investigated. One is a case where the eastward propagation speed of the meander is faster than a real state. The dynamical response of the model to the assimilation revealed that an initial shock, caused by the dynamically unbalanced initial condition, induces the fast eastward propagation of the meander. The other case exhibits an unrealistic meander. In this case, a cold anomaly at an intermediate layer in the initial condition grows rapidly and results in the unrealistic meander. This implies that the Kuroshio path south of Japan has a chaotic nature. These facts revealed by the failure cases give us some insight for improving the predictive skill of the Kuroshio path variability.     

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Journal of Oceanology and Limnology -     

Field Survey of Tsunami Effects in Sri Lanka due to the Sumatra-Andaman Earthquake of December 26, 2004

The December 26, 2004 Sumatra-Andaman earthquake that registered a moment magnitude (M_w) of 9.1 was one of the largest earthquakes in the world since 1900. The devastating tsunami that resulted from this earthquake caused more casualties than any previously reported tsunami. The number of fatalities and missing persons in the most seriously affected countries were Indonesia - 167,736, Sri Lanka - 35,322, India - 18,045 and Thailand - 8,212. This paper describes two field visits to assess tsunami effects in Sri Lanka by a combined team of Japanese and Sri Lankan researchers. The first field visit from December 30, 2004 – January 04, 2005 covered the western and southern coasts of Sri Lanka including the cities of Moratuwa, Beruwala, Bentota, Pereliya, Hikkaduwa, Galle, Talpe, Matara, Tangalla and Hambantota. The objectives of the first field visit were to investigate the damage caused by the tsunami and to obtain eyewitness information about wave arrival times. The second field visit from March 10–18, 2005 covered the eastern and southern coasts of Sri Lanka and included Trincomalee, Batticaloa, Arugam Bay, Yala National Park and Kirinda. The objectives of the second visit were mainly to obtain eyewitness information about wave arrival times and inundation data, and to take relevant measurements using GPS instruments.     

Late Holocene marine terraces of the Cartagena region,southern Caribbean: The product of neotectonism or a former high stand in sea-level?

The detailed stratigraphic survey and paleontological study (mollusks, corals, foraminifera and ostracods) of four low-level, ～3 m, marine terrace sections: Punta Canoas, Manzanillo del Mar, Playa de Oro, and Tierra Bomba Island, from the Cartagena region, southern Caribbean, supplemented with 22 radiocarbon dates, reveals that the northern terraces were deposited as parasequences in a clastic depositional system compared to the Tierra Bomba Island succession that was deposited in a carbonate depositional system between ～3600 and ～1700 cal yrs BP. Drier conditions and the southern location of the ITCZ at about 3 ka triggered stronger easterly Trades and more dynamic southwestward sediment drift fed by the Magdalena River mouth, thus promoting the formation of sand spits that ultimately isolated the Cienaga de Tesca coastal lagoon from the Caribbean Sea. Our estimates support the hypothesis that the present position of the terraces is the product of neotectonism rather than a higher 3 ka, sea-level. Upheaval of the terraces varies between ～3.8 mmyr^?1 at Punta Canoas and ～2.2 mmyr^?1 at Tierra Bomba to ～1.5 mmyr^?1 at Manzanillo del Mar and Playa de Oro terraces. Our study corroborates previous contentions on the role of mud diapirism and the dynamics of the Dique Fault as late Holocene upheaval mechanisms.     

A numerical study of a tide with four harmonic constituents at the open boundary

The tidal current in Kagoshima Bay is simulated by the two-dimensional subdomain finite-element method. At the open boundary, the sea level is forced to be oscillatory with a linear combination of the four harmonic constituents (M2, S2, K1, O1) of the tide. A calculation having only M2 sea level at the open boundary is also performed and the harmonic constants of M2 are compared with those calculated by the four components.In the calculated velocity vector, a large difference between the two maxima or the two minima in one day appears when the vector is directed to the open sea. On the other hand, when it is directed into the bay, the two extreme velocities are almost equal. In tide-killer residual flow, the flow pattern is almost independent of the tidal age; however, the absolute value of the current velocity depends on the tidal age. The pattern is nearly the same as that calculated by giving only M2 sea level at the open boundary.In relation to the nonlinear interaction, the kinetic energy ratio KER is defined by the ratio of kinetic energy of the induced harmonic components to that of harmonic constituents given at the open boundary. KER is large where the tidal current is disturbed by obstacles,e.g. along the west coast at the mouth of the bay and in the southern sea of Mt. Sakurajima. The distribution of KER seems to be independent of the number of harmonic constituents (one or four) given at the open boundary. The difference of kinetic energy of the M2 tidal constituent between the two calculations.i.e. with the open boundary conditions of four components (M2, S2, K1, O1) and of a single component (M2), is found to be large where the current velocity is large.     

Phytoremediation of heavy metal‐contaminated water and sediment by Eleocharis acicularis

Phytoremediation is an environmental remediation technique that takes advantage of plant physiology and metabolism. The unique property of heavy metal hyperaccumulation by the macrophyte Eleocharis acicularis is of great significance in the phytoremediation of water and sediments contaminated by heavy metals at mine sites. In this study, a field cultivation experiment was performed to examine the applicability of E. acicularis to the remediation of water contaminated by heavy metals. The highest concentrations of heavy metals in the shoots of E. acicularis were 20 200 mg Cu/kg, 14 200 mg Zn/kg, 1740 mg As/kg, 894 mg Pb/kg, and 239 mg Cd/kg. The concentrations of Cu, Zn, As, Cd, and Pb in the shoots correlate with their concentrations in the soil in a log‐linear fashion. The bioconcentration factor for these elements decreases log‐linearly with increasing concentration in the soil. The results indicate the ability of E. acicularis to hyperaccumulate Cu, Zn, As, and Cd under natural conditions, making it a good candidate species for the phytoremediation of water contaminated by heavy metals.     

Cloning and sequencing of the allophycocyanin genes fromSpirulina maxima (Cyanophyta)

The genes coding for the α-and β-subunit of allophycocyanin (apcA andapcB) from the cyanophyteSpirulina maxima were cloned and sequenced. The results revealed 44.4% of nucleotide sequence similarity and 30.4% of similarity of deduced amino acid sequence between them. The amino acid sequence identities betweenS. maxima andS. platensis are 99.4% for α subunit and 100% for β subunit.

     

Transposable genetic elements inSpirulina and potential applications for genetic engineering

Transposable elements in cyanobacteria are briefly reviewed. Evidence is presented to show that transposable elements inSpirulina platensis is actually reflected on the phenotype change, i e., helical to straight filaments. Transposition intermediates of DNA were isolated from the extrachromosome and the transposition was related to helical variations inSpirulina. Uses of transposable elements for microalgal recombination are discussed based on the transposition mechanism.

     

Distribution pattern and morphochemical relationships of manganese nodules from the Central Indian Basin

In the Central Indian Basin manganese nodule abundance was variable in all sediment types. Mean abundance varied from 1.5 in calcareous ooze to 10.2 kg/m² in terrigenous-siliceous ooze sediments. Nodule grade and growth rates are positively correlated only up to 10 mm/My (million years), and grade shows no distinct relationship with abundance. Relationships between the morphochemical characteristics of the nodules and host sediment types are subtle. Both hydrogenetic and diagenetic nodules (with smooth and rough surfaces respectively) occur on almost all sediments, but in variable proportions. Thus, the overall distribution pattern shows that small nodules (<4-cm diameters) of lower grade (average value Ni+Cu+Co=1.21%) with smooth surfaces are more common on red clay, terrigenous, and terrigenous-siliceous ooze transition-zone sediments. By contrast, large nodules (>4-cm diameters) of higher grade (average value Ni+Cu+Co=1.80%) with rough surfaces are more prevalent on siliceous ooze, siliceous ooze-red clay, and calcareous ooze-red clay transition-zone sediments. This implies an enhanced supply of trace metals from pore waters to rough-surface nodules during early diagenesis.