Micro-FTIR spectroscopic signatures of Bacterial lipids in Proterozoic microfossils

Precambrian microbial fossils show carbonaceous cellular structure, which often resemble in shape and size cyanobacteria and other prokaryotes. Morphological taxonomy of these minute, simple, and more or less degraded fossils is, however, often not enough to determine their precise phylogenetic positions. Here we report the results of micro-FTIR spectroscopic analyses of well-preserved microfossils in 850 Ma and 1900 Ma stromatolites, together with those of 8 species of extant prokaryotes and 5 of eukaryotes for comparison. These Proterozoic fossils have low CH₃/CH₂ absorbance ratios (R_3/2 < 0.5) of aliphatic CH moieties, suggesting selective preservation of long, straight, aliphatic carbon chains probably derived from bacterial membrane lipids. All the observed R_3/2 values of coccoids, filaments and amorphous organic matter resemble lipid fractions of extant Bacteria including cyanobacteria, but not Archaea. The results indicate that Proterozoic microfossils belong to Bacteria, which is consistent with the cyanobacterial origin inferred from morphology. Moreover, the R_3/2 value of fossilized cell would reflect chemical composition of its precursor membrane lipid, thus could be a useful new tracer for distinguishing Archaea, Bacteria and possibly Eucarya for fossilized and extant microorganisms.     

Shattering and coagulation of dust grains in interstellar turbulence

We investigate shattering and coagulation of dust grains in turbulent interstellar medium (ISM). The typical velocity of dust grain as a function of grain size has been calculated for various ISM phases based on a theory of grain dynamics in compressible magnetohydrodynamic turbulence. In this paper, we develop a scheme of grain shattering and coagulation and apply it to turbulent ISM by using the grain velocities predicted by the above turbulence theory. Since large grains tend to acquire large velocity dispersions as shown by earlier studies, large grains tend to be shattered. Large shattering effects are indeed seen in warm ionized medium within a few Myr for grains with radius   a ≳ 10⁻⁶  cm. We also show that shattering in warm neutral medium can limit the largest grain size in ISM  ( a ∼ 2 × 10⁻⁵ cm)  . On the other hand, coagulation tends to modify small grains since it only occurs when the grain velocity is small enough. Coagulation significantly modifies the grain size distribution in dense clouds (DC), where a large fraction of the grains with   a < 10⁻⁶ cm  coagulate in 10 Myr. In fact, the correlation among   R_V   , the carbon bump strength and the ultraviolet slope in the observed Milky Way extinction curves can be explained by the coagulation in DC. It is possible that the grain size distribution in the Milky Way is determined by a combination of all the above effects of shattering and coagulation. Considering that shattering and coagulation in turbulence are effective if dust-to-gas ratio is typically more than ∼1/10 of the Galactic value, the regulation mechanism of grain size distribution should be different between metal-poor and metal-rich environments.     

Coral Sr/Ca and Mg/Ca records in Con Dao Island off the Mekong Delta: Assessment of their potential for monitoring ENSO and East Asian monsoon

The climate of the South China Sea (SCS) is dominated by the East Asian monsoon (EAM) and can be related to the El Niño-Southern Oscillation (ENSO) owing to the interaction between ENSO and the EAM. An annually-banded coral (Porites sp.) collected from Con Dao Island in the southern SCS was measured for Sr/Ca and Mg/Ca ratios at near-monthly resolution through the annual bands of AD 1948–1999. This island is only ~ 90 km from the Mekong Delta coast and thus significantly influenced by riverine discharge, suggesting relatively severe environmental stress on corals. The Sr/Ca time series shows a clear annual cyclicity chiefly modulated by sea-surface temperature (SST), whereas the Mg/Ca time series exhibits an indistinct annual cyclicity, indicating that the previously-proposed coral Mg/Ca thermometry is greatly disturbed. An instrumental SST record in Con Dao Island (since 1980) has been compared with the Sr/Ca time series to calibrate a Sr/Ca thermometer. The Sr/Ca vs. SST comparison shows that the Sr/Ca thermometer is sometimes disturbed by some factor and that almost all of the disturbances occur around the annual-maximum SST in the warm/wet season. The Sr/Ca data around the annual-minimum SST in the cool/dry season is almost free from the disturbance and thus useful as a SST proxy. The disturbances of the Sr/Ca and Mg/Ca thermometers may be ascribed to the Mekong River discharge and its accompanying phenomena (i.e., large freshwater input, suspended-sediment loads, intense phytoplankton blooms, etc.), which are likely to disturb coral physiological processes. Applying the Sr/Ca thermometer to the whole Sr/Ca time series provides a SST reconstruction from 1948 through 1999. Reconstructed annual-minimum SSTs show a clear quasi-biennial oscillation significantly correlated with ENSO, indicating that the annual-minimum SST in the southern SCS tends to be higher (lower) in El Niño (La Niña) phases. This is compatible with previous observations that the East Asian winter monsoon is weakened (strengthened) in El Niño (La Niña) phases. The reconstructed SST record suggests a warming of 1.0 °C for the latter half of the 20th century. The Sr/Ca and Mg/Ca time series exhibit similar decadal-to-bidecadal variations, which do not seem to be primarily due to SST variability but rather due to some other factor possibly related to disturbance or fluctuation of coral physiological processes. Although both of our Sr/Ca and Mg/Ca data are affected, to a greater or lesser extent, by some non-temperature factor, a part of the Sr/Ca data provides a useful SST proxy and suggests that coral-based SST reconstruction in the southern SCS may be an effective means for monitoring the EAM and ENSO.     

Observations of Coherent Turbulence Structures in the Near-Neutral Atmospheric Boundary Layer

Turbulence structures of high Reynolds number flow in the near-neutral atmospheric boundary layer (ABL) are investigated based on observations at Shionomisaki and Shigaraki, Japan. A Doppler sodar measured the vertical profiles of winds in the ABL. Using the integral wavelet transform for the time series of surface wind data, the pattern of a descending high-speed structure with large vertical extent (from the surface to more than 200-m level) is depicted from the Doppler sodar data. Essentially this structure is a specific type of coherent structure that has been previously shown in experiments on turbulent boundary-layer flows. Large-scale high-speed structures in the ABL are extracted using a long time scale (240 s) for the wavelet transform. The non-dimensional interval of time between structures is evaluated as 3.0–6.2 in most cases. These structures make a large contribution to downward momentum transfer in the surface layer. Quadrant analyses of the turbulent motion measured by the sonic anemometer (20-m height) suggest that the sweep motion (high-speed downward motion) plays a substantial role in the downward momentum transfer. In general, the contribution of sweep motions to the momentum flux is nearly equal to that of ejection motions (low-speed upward motions). This contribution of sweep motions is related to the large-scale high-speed structures.     

Cumulative Benioff strain-release, modified Omori's law and transient behaviour of rocks

Irreversible thermodynamic theories with internal state variables can be used to derive a general constitutive law for both transient and steady-state behaviours of rocks. This constitutive law can represent the concepts of damage and damage evolution in either the fibre-bundle model or continuum damage mechanics. We have previously proposed an empirically based constitutive law for both the transient and steady-state behaviours of rocks ultimately derived from laboratory experimental data. We show here that this law is concordant with the general constitutive law derived from irreversible thermodynamic theories, and that the relaxation modulus has a temporal power–law that depends on a structural fractal property of rocks. Our constitutive law predicts forms for the cumulative Benioff strain-release for precursory seismic activations and the modified Omori's laws of aftershocks, both aspects of the temporal fractal properties of seismicity. These seismic properties can also be derived by the fibre-bundle model or continuum damage mechanics. Our model suggests that these time-scale invariant processes of seismicity may be regulated by the fractal structures of crustal rocks.     

New discoveries in dynamics of an M8 earthquake-phenomena and their implications from the 2003 Tokachi-oki earthquake using a long term monitoring cabled observatory

At the 2003 Tokachi-oki earthquake of M8, seafloor phenomena such as a generation process of tsunami, seafloor uplifts, turbidity current, etc., were observed using a cabled observatory installed on the seafloor. The turbidity current was observed as a benthic storm caused presumably by the mainshock. The seafloor uplifts were observed at the mainshock and continuously after the mainshock. The uplifts were 0.35, 0.37, and 0.12 m for epicentral distances of 25.5, 31.4, and 81.7 km, respectively. After the mainshock, a continuous uplift of the seafloor is observed at all three pressure gauge locations indicating that there was a change in the state of friction on the plate boundary interface by the mainshock. In this paper, we first show what was observed using the cabled observatory installed right above the focal area of the earthquake, and then we discuss to summarize these phenomena associated with the earthquake, its possible causes, and future directions in long term monitoring of seismogenic processes.     

Groundwater resources management under environmental constraints in Shiroishi of Saga plain, Japan

A sinking of the land surface due to the pumping of groundwater has long been recognized as an environmental issue in the Shiroishi plain of Saga, Japan. Land subsidence can have several negative economic and social implications such as changes in groundwater and surface water flow patterns, restrictions on pumping in land subsidence prone areas, localized flooding, failure of well casings as well as shearing of structures. To minimize such an environmental effect, groundwater management should be considered in this area. In this study, a new integrated numerical model that integrates a three-dimensional numerical groundwater flow model coupled with a one-dimensional soil consolidation model and a groundwater optimization model was developed to simulate groundwater movement, to predict ground settlement and to search for optimal safe yield of groundwater without violating physical, environmental and socio-economic constraints. It is found that groundwater levels in the aquifers greatly vary from season to season in response to the varying climatic and pumping conditions. Consequently, land subsidence has occurred rapidly throughout the area with the Shiroishi plain being the most prone. The predicted optimal safe yield of the pumping amount is about 5 million m³. The study also suggests that pumping with this optimal amount will minimize the rate of land subsidence over the entire area. An erratum to this article can be found at     

Simulation of groundwater flow and environmental effects resulting from pumping

In coastal lowland plains, increased water demand on a limited water resource has resulted in declining groundwater levels, land subsidence and saltwater encroachment. In southwestern Kyushu, Japan, a sinking of the land surface due to over pumping of groundwater has long been recognized as a problem in the Shiroishi lowland plain. In this paper, an integrated model was established for the Shiroishi site using the modular finite difference groundwater flow model, MODFLOW, by McDonald and Harbaugh (1988) and the modular three-dimensional finite difference groundwater solute transport model, MT3D, by Zheng (1990) to simulate groundwater flow hydraulics, land subsidence, and solute transport in the alluvial lowland plain. Firstly, problems associated with these groundwater resources were discussed and then the established model was applied. The simulated results show that subsidence rapidly occurs throughout the area with the central prone in the center part of the plain. Moreover, seawater intrusion would be expected along the coast if the current rates of groundwater exploitation continue. Sensitivity analysis indicates that certain hydrogeologic parameters such as an inelastic storage coefficient of soil layers significantly contribute effects to both the rate and magnitude of consolidation. Monitoring the present salinization process is useful in determining possible threats to fresh groundwater supplies in the near future. In addition, the integrated numerical model is capable of simulating the regional trend of potentiometric levels, land subsidence and salt concentration. The study also suggests that during years of reduced surface-water availability, reduction of demand, increase in irrigation efficiency and the utilization of water exported from nearby basins are thought to be necessary for future development of the region to alleviate the effects due to pumping.     

Progress in optical dating of guano-rich sediments associated with the Deep Skull, West Mouth of the Great Cave of Niah, Sarawak, Borneo

The West Mouth of the Great Cave of Niah is one of the major archaeological sites in Southeast Asia; the radiocarbon chronology of this site currently places the earliest presence of Homo sapiens (a Deep Skull find) in Southeast Asia at about 45 ka BP. An optical dating programme using sand-sized quartz was initiated in the West Mouth to complement the radiocarbon chronology. This paper reports on the progress in dating a key sample (sample 376r) that was taken from deposits containing the Deep Skull. A somewhat novel procedure was developed to separate and clean quartz grains from the unusual guano-rich deposits. From this, only a small quantity of quartz grains could be recovered and 36 aliquots (1 mm in diameter) were prepared, each consisting of 80 grains. This sample was dated by means of the single-aliquot regenerative-dose (SAR) method using the protocols of Murray and Wintle [2000. Luminescence dating of quartz using an improved single-aliquot regenerative-dose protocol. Radiation Measurements 32, 57–73], and of Choi et al. [2003. Luminescence dating of well-sorted marine terrace sediments on the southeastern coast of Korea. Quaternary Science Reviews 22, 407–421]. The results showed a wide distribution of equivalent doses; this distribution is inferred to be due to bioturbation, variable bleaching at deposition, and to local variations in the dose rate within the sample site. Dose rates were measured using both field (in-situ γ-ray spectrometry, IGRS) and laboratory (inductively coupled plasma mass spectrometry/atomic emission spectrometry, ICP-MS/AES; and isotope dilution, ID) methods. There was significant disagreement between the concentrations of radioisotopes found using laboratory and field measurements, indicating sediment heterogeneity and also possible disequilibrium in the ²³⁸U decay chain. Future work in the West Mouth should therefore concentrate on taking sediment samples of at least 500–600 cm³, improving the dose rate estimates (e.g. by high-resolution γ-ray spectrometry) and investigating other luminescence signals (e.g. red thermoluminescence) as potential geochronometers.