Upwelling plumes in sagami bay and adjacent water around the Izu Islands,Japan

Water plumes, 20 km long or less, identified by low temperature, high salinity and high nutrient concentrations, were observed on the eastern side of Izu Islands where the Kuroshio Current or its branch flowed eastward. The T-S diagrams and the vertical profiles of oceanographic variables indicated that the water plumes resulted from the upwelling of subsurface water. A newly formed plume, characterized by a sharp temperature front and high nutrient concentrations, contained less chlorophyll than did old plumes. It is suggested that the upwelling plumes are maintained for a period long enough to allow luxuriant growth of phytoplankton.     

Use of an optical oxygen sensor to measure dissolved oxygen in seawater

The use of an optical oxygen sensor to measure dissolved oxygen in seawater was investigated. The sensor is based on the dynamic quenching of an oxygen-sensitive fluorochrome embedded in the tip. Dissolved oxygen in seawater samples collected from eight stations at depths ranging from 3000 to 6000 m was analyzed both with the optical sensor and by the Winkler titration method. The two sets of data did not differ significantly. The stability and simplicity of the method and the good agreement of the results with those of the titration method indicate that the sensor would be useful for fieldwork.     

On the Polyps of the Common Jellyfish Aurelia aurita in Kagoshima Bay

There is the natural habitat of polyps of the common jellyfish Aurelia aurita in the Taniyama area, Kagoshima Bay. We examined the attachment substrata, density, colony structure and strobilation of the polyps. The polyps were observed only on the horizontal undersurface of floating piers. They attached specifically to Mytilus shells, solitary ascidians, calcareous polychaete tubes, muddy amphipod tubes and the gap space that fouling animals peeled off the substrata. The polyp colonies were distributed in patches. Spatial distribution patterns of the polyps within their colonies were uniform. Strobilation occurred during late December to March, when water temperatures were 16–17°C, and a large number of ephyrae were released. An increase in man-made structures such as floating piers in coastal areas may lead to bloomings of Aurelia aurita medusae. This revised version was published online in July 2006 with corrections to the Cover Date.     

Standing stocks and production rates of phytoplankton and planktonic copepods in the Inland Sea of Japan

Standing stocks and production rates of phytoplankton and planktonic copepods were investigated at 15 stations in the Inland Sea of Japan during four cruises in October–November 1979, January, April and June 1980. The overall mean of phytoplankton biomass was relatively constant during the study period, ranging from 2.3 mg chl.a m^–3 in April to 3.6 mg chl.a m^–3 in October–November. Primary production was low in January (mean: 90 mg C m^–2 d^–1), but higher than 375 mg C m^–2 d^–1 on the other occasions. Integrated annual primary production was 122 g C m^–2 yr^–1. In terms of carbon weight,Paracalanus parvus was the most important copepod species. The variation of the mean copepod biomass (range: 7.6 mg C m^–3 in April to 20.2 mg C m^–3 in June) was smaller than that of copepod production, which was estimated by the Ikeda-Motoda's physiological method. Copepod producion was low in cold seasons (0.6 and 0.9 mg C m^–3 d^–1 in January and April, respectively), and increased, following the elevation of primary production, to 4.9 mg C m^–3 d^–1 in June. Annual copepod production was 33.7 g C m^–2 yr^–1, of which herbivore (secondary) production was 26.4 g C m^–2 yr^–1 (21.7% of primary production). The ratios of pelagic planktivorous fish catch and total fish catch to the primary production were 0.82 and 1.8%, respectively, indicating very high efficiency in exploiting fishery resources in the Inland Sea of Japan.     

High parallelization efficiency in barotropic-mode computation of ocean models based on multi-grid boundary ghost area

In general, barotropic-mode computation requires the largest communication time in ocean models because of its iterative nature, when parallel computation is performed based on regional partitioning. In this study, reduction in the overhead time included in the communication in the parallel computation of the barotropic mode is considered to achieve a high parallelization efficiency of ocean models. We verify that the reduction in the communication frequency based on the multi-grid boundary ghost area reduces the total communication time. We find that this is because the sum of several kinds of overhead time for communication occupies a fairly large part of the total communication time. We discuss the trade-off between the decrease in communication time and the increase in computation time due to increased boundary area in such cases, leading to a determination of a suitable width of the multi-grid boundary that minimizes the total required time. We also discuss the efficiencies of the one- and two-dimensional partitioning of the model domain, when a multi-grid boundary is used. In general, two-dimensional partitioning is more efficient than one-dimensional for large partitioning numbers.     

Difference characteristics of sea surface temperature observed by GLI and AMSR aboard ADEOS-II

This study compares infrared and microwave measurements of sea surface temperature (SST) obtained by a single satellite. The simultaneous observation from the Global Imager (GLI: infrared) and the Advanced Microwave Scanning Radiometer (AMSR: microwave) aboard the Advanced Earth Observing Satellite-II (ADEOS-II) provided an opportunity for the intercomparison. The GLI-and AMSR-derived SSTs from April to October 2003 are analyzed with other ancillary data including surface wind speed and water vapor retrieved by AMSR and SeaWinds on ADEOS-II. We found no measurable bias (defined as GLI minus AMSR), while the standard deviation of difference is less than 1°C. In low water vapor conditions, the GLI SST has a positive bias less than 0.2°C, and in high water vapor conditions, it has a negative (positive) bias during the daytime (nighttime). The low spatial resolution of AMSR is another factor underlying the geographical distribution of the differences. The cloud detection problem in the GLI algorithm also affects the difference. The large differences in high-latitude region during the nighttime might be due to the GLI cloud-detection algorithm. AMSR SST has a negative bias during the daytime with low wind speed (less than 7 ms⁻¹), which might be related to the correction for surface wind effects in the AMSR SST algorithm.     

Validity of sea surface temperature observed with the TRITON buoy under diurnal heating conditions

In order to investigate the validity of buoy-observed sea surface temperature (SST), we installed special instruments to measure near-surface ocean temperature on the TRITON buoy moored at 2.07°N, 138.06°E from 2 to 13 March 2004, in addition to a standard buoy sensor for the regular SST measurement at 1.5-m depth. Large diurnal SST variations were observed during this period, and the variations of the temperatures at about 0.3-m depth could be approximately simulated by a one-dimensional numerical model. However, there was a notable discrepancy between the buoy-observed 1.5-m-depth SST (SST_1.5m) and the corresponding model-simulated temperature only during the daytime when the diurnal rise was large. The evaluation of the heat balance in the sea surface layer showed that the diurnal rise of the SST_1.5m in these cases could not be accounted for by solar heating alone. We examined the depth of the SST_1.5m sensor and the near-surface temperature observed from a ship near the buoy, and came to the conclusion that the solar heating of the buoy hull and/or a disturbance in the temperature field around the buoy hull would contribute to the excessive diurnal rise of the SST_1.5m observed with the TRITON buoy. However, the temperature around the hull was not sufficiently homogenized, as suggested in a previous paper. For the diurnal rise of the SST_1.5m exceeding 0.5 K, the daytime buoy data became doubtful, through dynamics that remain to be clarified. A simple formula is proposed to correct the unexpected diurnal amplitude of the buoy SST_1.5m.     

Fluid–Sediment Interaction in a Marine Shallow-Water Hydrothermal System in the Wakamiko Submarine Crater, South Kyushu, Japan

The Wakamiko submarine crater is a small depression located in Kagoshima Bay, southwest Japan. Marine shallow‐water hydrothermal activity associated with fumarolic gas emissions at the crater sea floor (water depth 200 m) is considered to be related with magmatic activity of the Aira Caldera. During the NT05‐13 dive expedition conducted in August 2005 using remotely operated vehicle Hyper‐Dolphine (Japan Agency for Marine‐Earth Science and Technology), an active shimmering site was discovered (tentatively named the North site) at approximately 1 km from the previously known site (tentatively named the South site). Surface sediment (up to 30 cm) was cored from six localities including these active sites, and the alteration minerals and pore fluid chemistry were studied. The pore fluids of these sites showed a drastic change in chemical profile from that of seawater, even at 30 cm below the surface, which is attributed to mixing of the ascending hydrothermal component and seawater. The hydrothermal component of the North site is estimated to be derived from a hydrothermal aquifer at 230°C based on the hydrothermal end‐member composition. Occurrence of illite/smectite interstratified minerals in the North site sediment is attributed to in situ fluid–sediment interaction at a temperature around 150°C, which is in accordance with the pore fluid chemistry. In contrast, montmorillonite was identified as the dominant alteration mineral in the South site sediment. Together with the significant low potassium concentration of the hydrothermal end‐member, the abundant occurrence of low‐temperature alteration mineral suggests that the hydrothermal aquifer in the South site is not as high as 200°C. Moreover, the montmorillonite is likely to be unstable with the present pore fluid chemistry at the measured temperature (117°C). This disagreement implies unstable hydrothermal activity at the South site, in contrast to the equilibrium between the pore fluid and alteration minerals in the North site sediment. This difference may reflect the thermal and/or hydrological structure of the Wakamiko Crater hydrothermal system.