Complete genome of Cobetia marina JCM 21022T and phylogenomic analysis of the family Halomonadaceae

Cobetia marina is a model proteobacteria in researches on marine biofouling. Its taxonomic nomenclature has been revised many times over the past few decades. ~To better understand the role of the surface-associated lifestyle of C. marina and the phylogeny of the family Halomonadaceae, we sequenced the entire genome of C. marina JCM 21022 ~T using single molecule real-time sequencing technology(SMR~T) and performed comparative genomics and phylogenomics analyses. ~The circular chromosome was 4 176 300 bp with an average GC content of 62.44% and contained 3 611 predicted coding sequences, 72 t RNA genes, and 21 r RNA genes. ~The C. marina JCM 21022 ~T genome contained a set of crucial genes involved in surface colonization processes. ~The comparative genome analysis indicated the significant diff erences between C. marina JCM 21022 ~T and Cobetia amphilecti KMM 296(formerly named C. marina KMM 296) resulted from sequence insertions or deletions and chromosomal recombination. Despite these diff erences, pan and core genome analysis showed similar gene functions between the two strains. ~The phylogenomic study of the family Halomonadaceae is reported here for the first time. We found that the relationships were well resolved among every genera tested, including Chromohalobacter, Halomonas, Cobetia, Kushneria, Zymobacter, and Halotalea.     

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Free radical scavenging abilities of polypeptide from Chlamys farreri

1 INTRODUCTION Active oxygen free radicals can damage cell structure, even kill the cells, causing aging and cer- tain serious diseases (Bors et al., 1989). Usually, the production and scavenging of active oxygen free radicals are in balance in healthy hu…     

CIRCULAR-ECONOMY MODELS OF ANIMAL HUSBANDRY INDUSTRY IN JILIN PROVINCE

1INTRODUCTION The circular-economyisan efficient resources metabolic process, based on principles of ecology and system engi- neering.Withcoupledstructure andthe complex ecolo- gical and economic evolution, it has the characteristics of overall integrity, coordination, and circulation (WANG, 2005). Compared with the traditionalecono- mic model, the circular-economy requires the technical model of production process to be changed from the opening flow pattern that is "resourcesconsumption…     

全站仪机载导线测量程序开发研究

介绍了全站仪机载程序开发的重要性和必要性，基于Leica公司TPS1000／1100系列全站仪机载程序开发工具——GeoBASIC，阐述了机载导线测量程序开发的技术关键，所开发的程序达到了预期的效果，满足了用户的需求。     

气候变暖背景下中国干旱变化的区域特征

在全球气温日趋升高和极端降水增加的气候背景下,近年来中国干旱变化特征异常突出,新形势下需进一步深入认识干旱发生特征及影响机制。利用1960-2014年中国527个气象站逐日气温和降水量数据,选用改进的综合气象干旱指数（MCI）作为干旱监测指标,详细分析了中国各区域干旱强度、次数和持续时间变化特征及其差异性。结果表明：1960年以来,中国各区域干旱程度加重,范围增大,次数增多,持续时间增长。干旱特征发生了明显的区域变化,各个区域干旱变化差异显著。西南、华中、华北和华南区域干旱程度明显加重,主要是重度以上干旱次数较多。华北和西南干旱年数最多,为45年,其他地方为35~36年,华北重度以上干旱年份最多,为14年,其次是东北和华南的7年。干旱发生时间和区域也有随机性,中国各区域四季都有可能发生干旱,干旱不仅发生在北方干旱和半干旱区域,在南方湿润和半湿润区域同样发生。各区域以夏旱为主,东北以春旱和夏旱居多,华南以秋旱为主。干旱持续时间不等,有时高达9个月。有些区域年内干旱呈单峰型,有些区域为双峰型。气候变暖背景下,中国各个区域干旱呈加重趋势。     

不同破碎波对沙质海床作用的实验研究

破碎波对近海海岸地形以及海岸建筑物影响强烈,通过物理模型实验对孤立波、规则波作用下破碎带的床面形态以及孔隙水压力进行分析。破碎波冲击海床,破碎处床面上形成沙坝和沙坑,与规则波相比,孤立波破碎时对床面的冲刷更加剧烈,床面形成的沙坝和沙坑尺度更大,且土体内孔隙水压力幅值也较大。同时研究了波面变化对孔隙水压力的影响,发现波面变化历时曲线与孔隙水压力历时曲线相似,与孔隙水压力梯度历时曲线更为相似,说明波面变化更能反映海床内部孔隙水压力梯度的变化。通过探讨波浪与海床之间相互耦合作用,发现破碎带地形变化使得波浪出现不同破碎类型,分析得出卷破波比崩破波作用下孔隙水压力幅值大。     

BACKGROUND STUDY ON NON-RESIDUAL PHASE OF ELEMENTS IN CHANGJIANG AND HUANGHE ESTUARINE SEDIMENTS

Analysis of Zn, Cu, Pb, Co, Cr, Li, Ni, K, Al, Fe extracted by 1 mol/L HCl or 0.5 mol/LHCl/H_2O_2, showed concentrations of Zn, Cu, Pb, Co, Cr, Fe, Ni were significantly correlated with Li, Al,K, and clay. Two methods are used to indicate the background value of the non-residual phase of elementsin sediments, and are the same as the methods used to indicate the background value of totalconcentrations in sediments. The first method uses correlograms and regression equations,the second usesthe mean element concentrations normalized with grain size. Li, Al, K can be used as reference elements to determine the background value of Zn, Cu, Pb, Co,Cr, Ni, Fe, while the clay concentration's correlation with some extractable concentrations can be used tocalculate the background value of the non-residual phase of elements as a percentage of clay concentrationin the sediments. Based on this study, the concept of using the background value of the non-residualphase of elements to compare the pollution level in differ