Heliophysics Event Knowledgebase for?the?Solar Dynamics Observatory (SDO) and Beyond

The immense volume of data generated by the suite of instruments on the Solar Dynamics Observatory (SDO) requires new tools for efficient identifying and accessing data that is most relevant for research. We have developed the Heliophysics Events Knowledgebase (HEK) to fill this need. The HEK system combines automated data mining using feature-detection methods and high-performance visualization systems for data markup. In addition, web services and clients are provided for searching the resulting metadata, reviewing results, and efficiently accessing the data. We review these components and present examples of their use with SDO data.     

Nonlinear Force-Free Extrapolation of Emerging Flux with a Global Twist and Serpentine Fine Structures

We study the flux emergence process in NOAA active region 11024, between 29 June and 7 July 2009, by means of multi-wavelength observations and nonlinear force-free extrapolation. The main aim is to extend previous investigations by combining, as much as possible, high spatial resolution observations to test our present understanding of small-scale (undulatory) flux emergence, whilst putting these small-scale events in the context of the global evolution of the active region. The combination of these techniques allows us to follow the whole process, from the first appearance of the bipolar axial field on the east limb, until the buoyancy instability could set in and raise the main body of the twisted flux tube through the photosphere, forming magnetic tongues and signatures of serpentine field, until the simplification of the magnetic structure into a main bipole by the time the active region reaches the west limb. At the crucial time of the main emergence phase high spatial resolution spectropolarimetric measurements of the photospheric field are employed to reconstruct the three-dimensional structure of the nonlinear force-free coronal field, which is then used to test the current understanding of flux emergence processes. In particular, knowledge of the coronal connectivity confirms the identity of the magnetic tongues as seen in their photospheric signatures, and it exemplifies how the twisted flux, which is emerging on small scales in the form of a sea-serpent, is subsequently rearranged by reconnection into the large-scale field of the active region. In this way, the multi-wavelength observations combined with a nonlinear force-free extrapolation provide a coherent picture of the emergence process of small-scale magnetic bipoles, which subsequently reconnect to form a large-scale structure in the corona.     

The truth and beauty of chemical potentials

This essay in honour of Mike Brown addresses aspects of chemical equilibrium and equilibration in rocks, with a focus on the role that chemical potentials play. Chemical equilibrium is achieved by diffusive flattening of chemical potential gradients. The idea of equilibration volume is developed, and the way equilibration volumes may evolve along a pressure–temperature path is discussed. The effect of the environment of an equilibration volume is key to understanding the evolution of the equilibration volume with changing conditions. The likely behaviour of equilibration volumes is used to suggest why preservation of equilibrium mineral assemblages and mineral compositions from metamorphism tends to occur. This line of logic then provides the conceptual support to conventional equilibrium thermodynamic approaches to studying rocks, using, for example, thermobarometry and pseudosections.     

The impact of ditch blocking on fluvial carbon export from a UK blanket bog

We investigated the effects of ditch blocking on fluvial carbon concentrations and fluxes at a 5‐year, replicated, control‐intervention field experiment on a blanket peatland in North Wales, UK. The site was hydrologically instrumented, and run‐off via open and blocked ditches was analysed for dissolved organic carbon (DOC), particulate organic carbon, dissolved carbon dioxide, and dissolved methane. DOC was also analysed in peat porewater and overland flow. The hillslope experiment was embedded within a paired control‐intervention catchment study, with 3 years of preblocking and 6 years of postblocking data. Results from the hillslope showed large reductions in discharge via blocked ditches, with water partly redirected into hillslope surface and subsurface flows, and partly into remaining open ditches. We observed no impacts of ditch blocking on DOC, particulate organic carbon, dissolved carbon dioxide or methane in ditch waters, DOC in porewaters or overland flow, or stream water DOC at the paired catchment scale. Similar DOC concentrations in ditch water, overland flow, and porewater suggest that diverting flow from the ditch network to surface or subsurface flow had a limited impact on concentrations or fluxes of DOC entering the stream network. The subdued response of fluvial carbon to ditch blocking in our study may be attributable to the relatively low susceptibility of blanket peatlands to drainage, or to physical alterations of the peat since drainage. We conclude that ditch blocking cannot be always be expected to deliver reductions in fluvial carbon loss, or improvements in the quality of drinking water supplies.     

砂土震陷分析中多维地震荷载等效循环周数计算

借助有限元数值方法模拟不同砂土试样在多向和单向地震荷载输入条件下的动三轴试验,选取覆盖大震、中震、近场、远场及不同土质条件的155组多向地震输入时程对不同砂土试样分别进行单向和多向加载,建立考虑多向地震荷载作用的等效循环周数计算方法,并研究震级、震中距和砂土特性对等效循环周数比的影响。研究表明,震级和震中距对等效循环周数比影响不明显,砂土特性对等效循环周数比的影响具有主导作用,砂土相对密度为45%、60%、80%和100%时,其对应的等效循环周数比均值分别为1.58、1.75、1.93和2.08,相对密度越大,比值越大,结合该比值,可以较好地应用文中提出方法进行多维地震荷载等效循环周数计算。     

Survival trends of Staphylococcus aureus, Pseudomonas aeruginosa, and Clostridium perfringens in a sandy South Florida beach

The search for alternative indicators of disease-risk from non-enteric pathogens at the beach revealed high densities of targeted bacteria. To explain the high numbers of potential non-enteric pathogens, Staphylococcus aureus and Pseudomonas aeruginosa, in beach sand, we investigated factors affecting their survival and distribution, as well as those of a potential fecal indicator, Clostridium perfringens. Results indicated greater S. aureus and P. aeruginosa survival and proliferation in sterile beach sand, than seawater, with diminished numbers upon exposure to natural micro-predators. C. perfringens remained relatively consistent with initial numbers. Intermediate sand particles (850 μm-2 mm) constituted the major micro-niche; creating implications for beach classification programs. Colonization of sterile sand boxes at the beach by S. aureus and P. aeruginosa confirmed the filtering action (>100×) of beach sand. The use of these potential pathogens in periodic sanitary evaluation of beach sand quality is indicated, regardless of the factors influencing their abundance.     

Zambezi continental margin: compartmentalized sediment transfer routes to the abyssal Mozambique Channel

Sediment delivery to the abyssal regions of the oceans is an integral process in the source to sink cycle of material derived from adjacent continents and islands. The Zambezi River, the largest in southern Africa, delivers vast amounts of material to the inner continental shelf of central Mozambique. The aim of this contribution is to better constrain sediment transport pathways to the abyssal plains using the latest, regional, high-resolution multibeam bathymetry data available, taking into account the effects of bottom water circulation, antecedent basin morphology and sea-level change. Results show that sediment transport and delivery to the abyssal plains is partitioned into three distinct domains; southern, central and northern. Sediment partitioning is primarily controlled by changes in continental shelf and shelf-break morphology under the influence of a clockwise rotating shelf circulation system. However, changes in sea-level have an overarching control on sediment delivery to particular domains. During highstand conditions, such as today, limited sediment delivery to the submarine Zambezi Valley and Channel is proposed, with increased sediment delivery to the deepwater basin being envisaged during regression and lowstand conditions. However, there is a pronounced along-strike variation in sediment transport during the sea-level cycle due to changes in the width, depth and orientation of the shelf. This combination of features outlines a sequence stratigraphic concept not generally considered in the strike-aligned shelf-slope-abyssal continuum.     

Sources of uncertainty in estimating stream solute export from headwater catchments at three sites

Uncertainty in the estimation of hydrologic export of solutes has never been fully evaluated at the scale of a small‐watershed ecosystem. We used data from the Gomadansan Experimental Forest, Japan, Hubbard Brook Experimental Forest, USA, and Coweeta Hydrologic Laboratory, USA, to evaluate many sources of uncertainty, including the precision and accuracy of measurements, selection of models, and spatial and temporal variation. Uncertainty in the analysis of stream chemistry samples was generally small but could be large in relative terms for solutes near detection limits, as is common for ammonium and phosphate in forested catchments. Instantaneous flow deviated from the theoretical curve relating height to discharge by up to 10% at Hubbard Brook, but the resulting corrections to the theoretical curve generally amounted to <0.5% of annual flows. Calibrations were limited to low flows; uncertainties at high flows were not evaluated because of the difficulties in performing calibrations during events. However, high flows likely contribute more uncertainty to annual flows because of the greater volume of water that is exported during these events. Uncertainty in catchment area was as much as 5%, based on a comparison of digital elevation maps with ground surveys. Three different interpolation methods are used at the three sites to combine periodic chemistry samples with streamflow to calculate fluxes. The three methods differed by <5% in annual export calculations for calcium, but up to 12% for nitrate exports, when applied to a stream at Hubbard Brook for 1997–2008; nitrate has higher weekly variation at this site. Natural variation was larger than most other sources of uncertainty. Specifically, coefficients of variation across streams or across years, within site, for runoff and weighted annual concentrations of calcium, magnesium, potassium, sodium, sulphate, chloride, and silicate ranged from 5 to 50% and were even higher for nitrate. Uncertainty analysis can be used to guide efforts to improve confidence in estimated stream fluxes and also to optimize design of monitoring programmes. © 2014 The Authors. Hydrological Processes published John Wiley & Sons, Ltd.     

EXOTIME: searching for planets around pulsating subdwarf B stars

In 2007, a companion with planetary mass was found around the pulsating subdwarf B star V391 Pegasi with the timing method, indicating that a previously undiscovered population of substellar companions to apparently single subdwarf B stars might exist. Following this serendipitous discovery, the EXOTIME (http://www.na.astro.it/~silvotti/exotime/) monitoring program has been set up to follow the pulsations of a number of selected rapidly pulsating subdwarf B stars on time scales of several years with two immediate observational goals:

1. determine $\dot{P}$ of the pulsational periods P
2. search for signatures of substellar companions in O–C residuals due to periodic light travel time variations, which would be tracking the central star’s companion-induced wobble around the centre of mass

These sets of data should therefore, at the same time, on the one hand be useful to provide extra constraints for classical asteroseismological exercises from the $\dot{P}$ (comparison with “local” evolutionary models), and on the other hand allow one to investigate the preceding evolution of a target in terms of possible “binary” evolution by extending the otherwise unsuccessful search for companions to potentially very low masses. While timing pulsations may be an observationally expensive method to search for companions, it samples a different range of orbital parameters, inaccessible through orbital photometric effects or the radial velocity method: the latter favours massive close-in companions, whereas the timing method becomes increasingly more sensitive toward wider separations. In this paper we report on the status of the on-going observations and coherence analysis for two of the currently five targets, revealing very well-behaved pulsational characteristics in HS?0444+0458, while showing HS?0702+6043 to be more complex than previously thought.     

How the UK Can Lead the Terrestrial Translation of Biomedical Advances Arising from Lunar Exploration Activities

Terrestrial translation of biomedical advances is insufficient justification for lunar exploration. However, terrestrial translation should be viewed as a critical part of the cycle of mission planning, execution and review, both in terms of the progress of space exploration, but also of sustained life on Earth. Thus, both the mission and its potential to benefit mankind are increased by the adoption of human-based exploration of the lunar surface. Whilst European biomedical sciences have grown in stature, there remains a gap between space biomedical science and terrestrial medical application. As such, an opportunity for the UK to take a sustainable leadership role exists by utilising its biomedical science community, socialised health care system (National Health Service) and defined mechanisms to determine the clinical efficacy and cost-effectiveness upon health and wellbeing (i.e. National Institute Clinical Excellence), aiding the difficult process of health care rationing. By focusing upon exploitation of the more scientifically rewarding, potentially long-term and more terrestrially analogous challenge of lunar habitation, the UK would circumnavigate the current impediments to International Space Station utilisation. Early engagement in lunar exploration would promote the UK, and its adoption of a leadership role incorporating a considered approach to the development of space biomedicine with an eye to its terrestrial value. For instance, prolonged lunar habitation could provide an ‘ideal controlled environment’ for investigation of medical interventions, in particular multiple interactions (e.g. between exercise and nutrition), a model of accelerated aging and a number of chronic pathologies, including those related to disuse. Lunar advances could provide a springboard for individualized medicine, insights into occupational and de-centralised medicine (e.g. telemedicine) and act as a stimulus for biomedical innovation and understanding. Leadership in biomedical science activities would retain mission critically (and thus avoid obsolesce) so long as a human is involved (irrespective of specific mission architecture) and could be used to leverage opportunities for UK-based institutions, companies and individuals, most notably current ESA astronaut candidate Major Tim Peake. A combination of ESA engagement and national support for space biomedical sciences via research councils (e.g. Medical Research Council) could facilitate a virtuous circle of investment, advancement and socio-economic return invigorating the NHS, education, and key research initiatives such as ESA Harwell, UK Centre for Medical Research and Innovation, and the newly instigated Academic Health Science Centres. Such a strategy could also boost private space enterprise within the UK including the creation of a space port and could help retain the UK’s position as a European aerospace transportation, services and legislative hub. By focusing upon its biomedical strength within a multi-faceted but co-ordinated strategy of engagement, the UK could reap significant socio-economic benefits for the UK and its citizens, be they on the Moon, or the Earth.