Prevalence of Bacillus sp. among the biofilm forming community on Ti surface in marine environment

Prevalence of bacterial species involved in biomineralization of manganese on titanium (Ti) surfaces in marine environment was revealed in this research work. This study involves one year sea water exposure of Ti and their periodical biofilm characterization was carried out to quantify the manganese oxidizing bacterial (MOB) presence in the biofilm formed on titanium surfaces. The total viable count study of Ti coupons exposed to sea water for one year resulted in 60% of the MOB in overall biofilm population. The biochemical characterization of MOB isolates were performed for the genus level identification of the seven bacterial isolates. Further, the seven strains were subjected to 16S rRNA gene sequencing. Evolutionary analysis was performed using MEGA 7 to obtain closely related strains within the groups. The manganese oxidizing ability of the bacterial isolates were determined with Leucoberbelin Blue Assay (LBB) and Atomic Absorption Spectroscopy studies (AAS). The results show that among the isolated marine MOB species, Bacillus sp. and Leptothrix sp. have the maximum Mn oxidizing property. The microtitre plate assay was performed to determine the biofilm forming ability of the isolated marine MOB species. All the results have confirmed the prevalence of Bacillus sp. among the biofilm colonizers on Ti surfaces when exposed in sea water.     

Spatial variation of the intertidal sediments and macrozoo-benthic assemblages along Eighty-mile Beach, North-western Australia

The extensive intertidal flats along Eighty-mile Beach in North-western Australia appear to be monotonous and homogeneous and seem ideally suited to study tidal zonation in macrozoo-benthic communities and their possible correlates with characteristics of the sediment. In October 1999, we sampled benthic invertebrates and sediments at a total of 895 sampling stations distributed over six different locations, each location separated by 15 km of unsampled foreshore along Eighty-mile Beach. To test for the presence or absence of patterns of tidal zonation (distinct height-related zones of specific sediment grain sizes or zoobenthic taxonomic groups) or patchiness (distinct patches of specific sediment grain sizes or zoobenthic taxonomic groups not related to tidal height) each location was divided into three along-shore sections and each section (transect) was examined at two or three tidal heights. Zonation was observed for sediment grain sizes. Sediments were coarser at the highest intertidal level and finer towards the low water line. Benthic assemblages also differed among tidal heights, but in terms of species-composition the differences were not consistent among the locations. Each location supported a unique collection of benthic invertebrates. Therefore the hypothesis of the presence of distinct zones of specific species or zoobenthic taxonomic groups was rejected; the presence of benthic patches was confirmed. The distribution of sediments and the composition of benthic assemblages were surprisingly poorly correlated compared to those reported in 12 previous quantitative studies around the world. One possible explanation might be that super-cyclone Vance, which hit the study-area only six months before this study, contributed to this poor correlation. Alternatively, the poor correlation may indicate that biotic interactions are more important than the assumed abiotic structuring.     

Population structure of the sicklefin lemon shark Negaprion acutidens within the Curieuse Marine National Park,Seychelles

This study produced the first data on population parameters for sicklefin lemon shark Negaprion acutidens at the granitic Seychelles Islands, adding to a limited catalogue of species information. Juveniles at a site in the Curieuse Marine National Park were tagged over two periods, in 2014–2015 and 2015–2016, with measurements of length (precaudal, fork and total) and weight, sex, and state of the umbilical opening recorded. Recapture data were used to calculate growth rates and population size. Mean annual growth rate was 5.40 cm y^–1. A mean size at birth of 62.5 cm TL is in line with previous assessments of the species. Population-size estimates were similar for the two sampling periods (comprising 311 and 255 individuals) and higher than anticipated. Movements to outside the lagoon were recorded for early ages, and this, combined with weight loss and a reduction in condition factor as displayed in several individuals, suggests that the study area alone could not support the large number of sharks pupped yearly.     

A conduit-related genesis of the Lengshuiqing intrusive assemblage (Sichuan,SW China)

Lengshuiqing is part of the late Proterozoic igneous province from the western margin of the Yangtze craton. The Lengshuiqing area comprises five ultramafic–mafic intrusions, emplaced in the late Proterozoic Yanbian Group. The intrusions from Lengshuiqing contain cumulate ultramafic zones (peridotite + olivine pyroxenite), with cumulus olivine and Cr-spinel, and intercumulus pyroxenes, hornblende, phlogopite and plagioclase. Ni–Cu ore (pyrrhotite + pentlandite + chalcopyrite) is hosted in the ultramafic zones. Olivine-free diorite–quartz diorite ± gabbro and granite zones commonly occur above the ultramafic rocks. The genesis of the intrusions (conduit-related accumulation or differentiation from stagnant magma) was investigated. The amount of sulphides in the intrusions from Lengshuiqing is one order of magnitude bigger than the sulphides that can be dissolved by a volume of mafic magma similar with the volume of the intrusions. Most intrusions from Lengshuiqing have bulk composition (peridotite ± diorite ± granite) more magnesian (MgO = 21–22%; Mg# > 78) than the deduced composition of their parental magma (MgO = 9–11%; Mg# = 64–67). This indicates the accumulation of sulphide and mafic silicates from a volume of magma much bigger than the volume of the intrusions, which can be explained by the fractionation from magma ascending through the intrusions to shallower depths. A continuous supply and vent of magma is consistent with the lack of chilled margins, the melting of the wall rocks and the generation of high-temperature mineral assemblages (K-feldspar, diopside, and sillimanite) in the Yanbian Group. The intrusions from Lengshuiqing are seen as microchambers on conduits draining olivine-, Cr-spinel-, and sulphide-bearing mafic magma from a larger staging chamber.     

Feeding ecology of mesopelagic zooplankton of the subtropical and subarctic North Pacific Ocean determined with fatty acid biomarkers

Mesopelagic zooplankton may meet their nutritional and metabolic requirements in a number of ways including consumption of sinking particles, carnivory, and vertical migration. How these feeding modes change with depth or location, however, is poorly known. We analyzed fatty acid (FA) profiles to characterize zooplankton diet and large particle (>51 μm) composition in the mesopelagic zone (base of euphotic zone ?1000 m) at two contrasting time-series sites in the subarctic (station K2) and subtropical (station ALOHA) Pacific Ocean. Total FA concentration was 15.5 times higher in zooplankton tissue at K2, largely due to FA storage by seasonal vertical migrators such as Neocalanus and Eucalanus. FA biomarkers specific to herbivory implied a higher plant-derived food source at mesotrophic K2 than at oligotrophic ALOHA. Zooplankton FA biomarkers specific to dinoflagellates and diatoms indicated that diatoms, and to a lesser extent, dinoflagellates were important food sources at K2. At ALOHA, dinoflagellate FAs were more prominent. Bacteria-specific FA biomarkers in zooplankton tissue were used as an indicator of particle feeding, and peaks were recorded at depths where known particle feeders were present at ALOHA (e.g., ostracods at 100–300 m). In contrast, depth profiles of bacterial FA were relatively constant with depth at K2. Diatom, dinoflagellate, and bacterial biomarkers were found in similar proportions in both zooplankton and particles with depth at both locations, providing additional evidence that mesopelagic zooplankton consume sinking particles. Carnivory indices were higher and increased significantly with depth at ALOHA, and exhibited distinct peaks at K2, representing an increase in dependence on other zooplankton for food in deep waters. Our results indicate that feeding ecology changes with depth as well as by location. These changes in zooplankton feeding ecology from the surface through the mesopelagic zone, and between contrasting environments, have important consequences for the quality and quantity of organic material available to deeper pelagic and benthic food webs, and for organic matter sequestration.     

Water quality in a polluted lowland stream with chronically depressed dissolved oxygen: Causes and effects

Abstract

The Whangamaire Stream (North Island, New Zealand) has high concentrations of nitrate nitrogen (NO^? ₃‐N), biochemical oxygen demand (BOD₅), and Kjeldahl nitrogen (TKN) as a result of catchment land use practices. The lower reaches of the stream drain intensively farmed land and have dissolved oxygen (DO) levels of 10–50% saturation. The dominant riparian vegetation, Apium nodiflorum, provides a large organic loading by intercepting nutrients in run‐off and then decaying in the stream channel. Water quality and reaeration aspects of the stream were studied in order to explain the observed low DO levels. Measurements of the reaeration coefficient at 20°C, K₂ ²⁰, using methyl chloride (CH₃Cl) as a gas tracer, yielded values of 1.1–3.0 d^?1 for the upper part of the study reach and 15.5–16.2 d^?1 for the lower reach (overall average 12.5 ± 2.5 d^?1). These were in agreement with values inferred from single‐station diurnal curve analysis, which also showed that respiration was dominant in the lower reach where photo‐synthetic activity was inhibited by shade. The relatively large reaeration coefficients ensure that parts of the stream do not become anoxic at night time. Better riparian management and reduced nutrient inputs are likely to improve stream water quality.     

Global distribution of summer chlorophyll blooms in the oligotrophic gyres

Chlorophyll blooms consistently develop in the oligotrophic NE Pacific in late summer, isolated from land masses and sources of higher chlorophyll waters. These blooms are potentially driven by nitrogen fixation, or by vertically migrating phytoplankton, and a better understanding of their ubiquity could improve our estimate of the global nitrogen fixation rate. Here, global SeaWiFS chlorophyll data from 1997 to 2007 are examined to determine if similar blooms occur in other oligotrophic gyres. Our analysis revealed blooms in five other areas. Two of these are regions where blooms have been previously identified: the SW Pacific and off the southern tip of Madagascar. Previously, unnoticed summer blooms were also identified in the NE and SW Atlantic and in a band along 10°S in the Indian Ocean. There is considerable variation in the intensity and frequency of blooms in the different regions, occurring the least frequently in the Atlantic Ocean. The blooms that develop along 10°S in the Indian Ocean are unique in that they are clearly associated with a hydrographic feature, the 10°S thermocline ridge, which explains the bloom within a conventional upwelling scenario. The environment and timing of the blooms, developing in oligotrophic waters in late summer, are conducive to both nitrogen fixers and vertically migrating phytoplankton, which require a relatively stable water column. However, the specific locations of the chlorophyll blooms generally do not coincide with areas of maximum levels of nitrogen fixation or Trichodesmium. The NE Pacific chlorophyll blooms develop in a region with a very high SiO₄/NO₃ ratio, where silicate will not be a limiting nutrient for diatoms. The blooms often develop between eddies, wrapping around the periphery of anti-cyclonic features. However, none of the areas where the blooms develop have particularly high eddy kinetic energy, from either a basin-scale or a mesoscale perspective, suggesting that other factors, such as interactions with a front or dynamics associated with the critical latitude, operate in conjunction with the eddy field to produce the observed blooms.     

Can turbidity caused by Corophium volutator (Pallas) activity be used to assess sediment toxicity rapidly?

The standard toxicity test organism, Corophium volutator, exhibits a behavioural response to contaminated sediments that causes increased turbidity of overlying water. We quantify the effects of this response to an estuarine sediment spiked with copper and hydrocarbon contaminated sediments from an oil installation in the North Sea. Turbidity measured 24 h after the start of a toxicity test shows a strong relationship with contaminant concentrations and with mortality after 10 days. Turbidity measurements can therefore give a rapid indication of sediment toxicity, permitting a reduction in storage time of sediments to be used in dilution series and toxicity identification evaluation (TIE) tests, reducing the likelihood of contaminants degrading prior to testing.