Application of trichloroacetic acid (TCA) to extraction of soft body for the determination of tissue Cd, Cu, Pb and Zn in the prosobranch Hydrobia ulvae (Pennant)

The application of trichloroacetic acid (TCA) as a shell extractant for preparation of soft body parts with reference to tissue metal concentrations (Cd, Cu, Pb, Zn) in shellfish has been evaluated on the example of the mud snail Hydrobia ulvae, a small marine prosobranch densely present in rocky and soft-bottom habitats of the eastern Atlantic. A solution of 0.1 M TCA was tested on individuals treated according to two different protocols: (1) thawed after freezing ("non-dried") and (2) thawed and air-dried to a constant weight ("dried"). Two points were investigated in detail to improve the method: individual soft tissue dry weight and tissue metal concentration following a standard digestion method. In both instances, the results were compared with those from manually dissected snails. Conditions for total shell decalcification of 60 individuals (3-4 mm long) were 5.5 h in 20 ml of 0.1 M TCA.No differences in individual soft tissue weight were observed between the treatments, indicating good efficiency of the TCA extraction with respect to weight of soft body parts. In contrast, tissue metal concentrations varied among treatments. The TCA extraction of the dried animals had a good recovery for Cd, most likely due to the lower solubility of Cd vital cellular components (proteins and mineral concretions) from the dried tissue. Satisfactory recoveries of the tissue concentrations of Cu and Pb were obtained for the non-dried individuals. This might be related to the specific distribution of metals in the organism (namely in the digestive glands and gonads) and their different chemical reactivity with TCA after the tissue was dried. Limited susceptibility of Zn-bearing protein bindings to complexing with TCA also accounts for significantly lower concentrations of Zn in the mud snail's soft tissue that was extracted. The 0.1 M TCA solution is therefore recommended for extraction of the shells of Hydrobia ulvae for tissue determination of Cd, Cu and Pb; however the treatment protocol does affect metal recovery and thus a consistent procedure should be followed.The extracted metals from the soft tissues and shells of the mud snails (on the basis of both metal concentrations and contents) were ranked in order of increasing contribution of soft body parts to the total (shell+tissue): Pb相似文献   

Abnormal features of Macoma balthica (Bivalvia) in the Baltic Sea: alerting symptoms of environmental adversity?

Recent studies of the Baltic clam Macoma balthica (L.) from the southern Baltic (the Gulf of Gdansk) have revealed striking morphological, histological and cytogenetic features. Strong deformation of the shell, including elongation of the posterior end and the appearance of an easily visible flexure in this part, has been recorded. The population contribution of the deformed blunt shelled ("irregular") clams ranged from 0% to 65% and tended to increase with depth. The morphologically "irregular" clams had higher accumulated tissue concentrations of trace metals (As, Ag, Cd, Pb, Cu and Zn), indicating a different metal handling ability. Adverse conditions in deeper water regions of the Gulf (e.g. hypoxia, hydrogen sulphide, elevated bioavailability of contaminants) have been suggested as inducers of the phenotypical changes (morphological deformation) in part of the population and, in parallel, of the specific physiological adaptations that result in higher metal accumulation in the "irregular" clams. Cytogenetic and histological analyses showed the presence of tumours in gill cells and digestive system of the affected clams, the prevalence of disseminated neoplasia ranging from 0% to 94% depending on the site. The disease was manifested by a modified karyotype (i.e. an abnormal number and morphology of chromosomes), a higher activity of nucleolar organizer regions (AgNORs), and tissue lesions (enlarged cells, actively proliferative with pleomorphic nuclei). Bottom sediments showed acute toxicity and have been proposed as a source of an initialising carcinogenic factor. However, none of the ecotoxicological studies provided was successful in the clear demonstration of a single (or multifactorial) agent that can account for the disseminated neoplasia.     

Applications of C and N stable isotopes to ecological and environmental studies in seagrass ecosystems

Stable isotopes of carbon and nitrogen are increasingly used in marine ecosystems, for ecological and environmental studies. Here, we examine some applications of stable isotopes as ecological integrators or tracers in seagrass ecosystem studies. We focus on both the use of natural isotope abundance as food web integrators or environmental tracers and on the use of stable isotopes as experimental tools. As ecosystem integrators, stable isotopes have helped to elucidate the general structure of trophic webs in temperate, Mediterranean and tropical seagrass ecosystems. As environmental tracers, stable isotopes have proven their utility in sewage impact measuring and mapping. However, to make such environmental studies more comprehensible, future works on understanding of basic reasons for variations of N and C stable isotopes in seagrasses should be encouraged. At least, as experimental tracers, stable isotopes allow the study of many aspects of N and C cycles at the scale of a plant or at the scale of the seagrass ecosystem.     

Revisiting the morphological method in two-dimensions to quantify bed-material transport in braided rivers

Research in the 1990s showed that bed-material transport rates could be estimated at the reach scale in both one-dimension and, over small spatial scales (10s of m), in two-dimensions. The limit on the latter was the spatial scale over which it was possible to obtain distributed data on morphological change. Here, we revisit the morphological method given progress in both topographical data acquisition and hydraulic modelling. The bed-material transport needed to conserve mass is calculated in both one and two dimensions for a 1600 m × 300 m Alpine braided river “laboratory”. High-resolution topographical data were acquired by laser scanning to quantify Digital Elevation Models (DEMs), and morphological changes caused by the flushing of the water intake were derived from repeated surveys. Based on DEMs of differences, 1D bed-material transport rates were calculated using the morphological method. Then, a 2D hydraulic model was combined with a topographic correction to route sediment through the network of braided channels and to obtain a spatially variable estimate of transport in both downstream and cross-stream directions. Monte Carlo simulation was applied to the routing model parameters, allowing identification of the most probable parameter values needed to minimize negative transport. The results show that within-section spatial compensation of erosion and deposition using the 1D treatment leads to substantial local errors in transport rate estimates, to a degree related to braiding intensity. Even though the 2D application showed that a large proportion of the total transport was actually concentrated into one main channel during the studied low flow event, the proportion of transport in secondary anabranches is substantial when the river starts braiding. Investigations of the effects of DEM resolution, competent flow duration and survey frequency related to ‘travelling bedload’ and sequential erosion-deposition emphasized the critical importance of careful data collection in the application of the morphological method. © 2019 John Wiley & Sons, Ltd.     

Interactive Visualization to Advance Earthquake Simulation

The geological sciences are challenged to manage and interpret increasing volumes of data as observations and simulations increase in size and complexity. For example, simulations of earthquake-related processes typically generate complex, time-varying data sets in two or more dimensions. To facilitate interpretation and analysis of these data sets, evaluate the underlying models, and to drive future calculations, we have developed methods of interactive visualization with a special focus on using immersive virtual reality (VR) environments to interact with models of Earth’s surface and interior. Virtual mapping tools allow virtual “field studies” in inaccessible regions. Interactive tools allow us to manipulate shapes in order to construct models of geological features for geodynamic models, while feature extraction tools support quantitative measurement of structures that emerge from numerical simulation or field observations, thereby enabling us to improve our interpretation of the dynamical processes that drive earthquakes. VR has traditionally been used primarily as a presentation tool, albeit with active navigation through data. Reaping the full intellectual benefits of immersive VR as a tool for scientific analysis requires building on the method’s strengths, that is, using both 3D perception and interaction with observed or simulated data. This approach also takes advantage of the specialized skills of geological scientists who are trained to interpret, the often limited, geological and geophysical data available from field observations.     

A simple model accounting for the uptake,transport, and deposition of wind‐eroded mineral particles in the hyperarid coastal Atacama Desert of northern Chile

As previously observed in marine sediments collected downwind of African or South American continental sources, recent studies of sediment cores collected at the bottom of Mejillones Bay in north Chile (23°S) show a laminated structure in which the amount of particles of aeolian origin and their size create significant differences between the layers. This suggests inter‐annual to inter‐decadal variations in the strength of the local southerly winds responsible for (1) the erosion of the adjacent hyperarid surface of the Mejillones Pampa, and (2) the subsequent transport of the eroded particles towards the bay. A simple model accounting for the vertical uptake, transport, and deposition of the particles initially set into motion by wind at the surface of the pampa is proposed. This model, which could be adapted to other locations, assumes that the initial rate of (vertical) uptake is proportional to the (horizontal) saltation flux quantified by means of White's equation, that particles are lifted to a height (H), increasing with the magnitude of turbulence, and that sedimentation progressively removes the coarsest particles from the air column as it moves towards the bay. In this model, the proportionality constant (A) linking the vertical flux of particles with the horizontal flux, and the injection height (H) control the magnitude and size distribution of the deposition flux in the bay. Their values are determined using the wind speed measured over the pampa and the size distribution of particles collected in sediment traps deployed in the bay as constraints. After calibration, the model is used to assess the sensitivity of the deposition flux to the wind intensity variations. The possibility of performing such quantitative studies is necessary for interpreting precisely the variability of the aeolian material in the sediment cores collected at the bottom of Mejillones Bay. Copyright © 2010 John Wiley & Sons, Ltd.     

Regional patterns of observed sea level change: insights from a 1/4° global ocean/sea-ice hindcast

A global eddy-admitting ocean/sea-ice simulation driven over 1958–2004 by daily atmospheric forcing is used to evaluate spatial patterns of sea level change between 1993 and 2001. In the present study, no data assimilation is performed. The model is based on the Nucleus for European Models of the Ocean code at the 1/4° resolution, and the simulation was performed without data assimilation by the DRAKKAR project. We show that this simulation correctly reproduces the observed regional sea level trend patterns computed using satellite altimetry data over 1993–2001. Generally, we find that regional sea level change is best simulated in the tropical band and northern oceans, whereas the Southern Ocean is poorly simulated. We examine the respective contributions of steric and bottom pressure changes to the total regional sea level changes. For the steric component, we analyze separately the contributions of temperature and salinity changes as well as upper and lower ocean contributions. Generally, the model results show that most regional sea level changes arise from temperature changes in the upper 750 m of the ocean. However, contributions of salinity changes and deep steric changes can be locally important. We also propose a map of ocean bottom pressure changes. Finally, we assess the robustness of such a model by comparing this simulation with a second simulation performed by MERCATOR-Ocean based on the same core model, but differing by its short length of integration (1992–2001) and its surface forcing data set. The long simulation presents better performance over 1993–2001 than the short simulation, especially in the Southern Ocean where a long adjustment time seems to be needed. In memory of my little brother Jean-Eudes, whose thirst for science filled out the rich discussions we had about my investigations and his job as user-service provider for MERCATOR-Ocean.     

The snowball Earth aftermath: Exploring the limits of continental weathering processes

Carbonates capping Neoproterozoic glacial deposits contain peculiar sedimentological features and geochemical anomalies ascribed to extraordinary environmental conditions in the snowball Earth aftermath. It is commonly assumed that post-snowball climate dominated by CO₂ partial pressures several hundred times greater than modern levels, would be characterized by extreme temperatures, a vigorous hydrological cycle, and associated high continental weathering rates. However, the climate in the aftermath of a global glaciation has never been rigorously modelled. Here, we use a hierarchy of numerical models, from an atmospheric general circulation model to a mechanistic model describing continental weathering processes, to explore characteristics of the Earth system during the supergreenhouse climate following a snowball glaciation. These models suggest that the hydrological cycle intensifies only moderately in response to the elevated greenhouse. Indeed, constraints imposed by the surface energy budget sharply limit global mean evaporation once the temperature has warmed sufficiently that the evaporation approaches the total absorbed solar radiation. Even at 400 times the present day pressure of atmospheric CO₂, continental runoff is only 1.2 times the modern runoff. Under these conditions and accounting for the grinding of the continental surface by the ice sheet during the snowball event, the simulated maximum discharge of dissolved elements from continental weathering into the ocean is approximately 10 times greater than the modern flux. Consequently, it takes millions of years for the silicate weathering cycle to reduce post-snowball CO₂ levels to background Neoproterozoic levels. Regarding the origin of the cap dolostones, we show that continental weathering alone does not supply enough cations during the snowball melting phase to account for their observed volume.     

Double trouble: subsidence and CO<Subscript>2</Subscript> respiration due to 1,000 years of Dutch coastal peatlands cultivation

Coastal plains are amongst the most densely populated areas in the world. Many coastal peatlands are drained to create arable land. This is not without consequences; physical compaction of peat and its degradation by oxidation lead to subsidence, and oxidation also leads to emissions of carbon dioxide (CO₂). This study complements existing studies by quantifying total land subsidence and associated CO₂ respiration over the past millennium in the Dutch coastal peatlands, to gain insight into the consequences of cultivating coastal peatlands over longer timescales. Results show that the peat volume loss was 19.8 km³, which lowered the Dutch coastal plain by 1.9 m on average, bringing most of it below sea level. At least 66 % of the volume reduction is the result of drainage, and 34 % was caused by the excavation and subsequent combustion of peat. The associated CO₂ respiration is equivalent to a global atmospheric CO₂ concentration increase of ~0.39 ppmv. Cultivation of coastal peatlands can turn a carbon sink into a carbon source. If the path taken by the Dutch would be followed worldwide, there will be double trouble: globally significant carbon emissions and increased flood risk in a globally important human habitat. The effects would be larger than the historic ones because most of the cumulative Dutch subsidence and peat loss was accomplished with much less efficient techniques than those available now.