Population genetic diversity and structure of a dominant tropical seagrass,Cymodocea rotundata,in the Western Pacific region

Cymodocea rotundata is an ecologically important tropical pioneer seagrass species distributed in the Indo‐Pacific region. The population genetic diversity and structure of this species were analysed at 46 sites spanning the Philippines, Ryukyu Islands (northern limit) and Hainan Island, by using microsatellite simple sequence repeat (SSR) markers. Analyses revealed the persistence of C. rotundata likely relies on local population dynamics and fitness influenced by environmental gradients, with sexual reproduction prevalent in the Philippines while the Ryukyu and Hainan populations were predominantly established by clonal spread. Analysis of molecular variance showed significant genetic differentiation (P < 0.001) among three geographic regions: the Philippines, Ryukyu and Hainan. Furthermore, the mean fixation index value was very high (F_ST = 0.36), indicating poor dispersal potential or limited gene flow. Allelic richness and heterozygosity of C. rotundata was comparable in the Philippines and Ryukyu Islands populations. More private alleles were found in the Philippines and excess heterozygotes in the Ryukyu Islands. STRUCTURE analysis revealed that the Ryukyu and Hainan populations were mosaics of admixed alleles of individuals from the Philippines. An assignment test suggested that recruitment occurs from the Northeast Philippines to Ryukyu Islands. These results suggest that the Philippine populations are tropical seagrass hotspots and perhaps the origin of the populations in the Ryukyu and Hainan Islands. This scenario is most likely driven by the Kuroshio Current and island integration events during plate tectonic activities. The Philippine Archipelago is considered of high importance for conservation objectives and management plan of seagrasses. Likewise, the Ryukyu Islands are also important in terms of conserving regional diversity because locally adapted genotypes have important evolutionary potential in the face of environmental change.     

不同刚度植物杆群对规则波传播及紊动特性影响研究

以不同刚度硅胶圆杆群为概化植物模型,测定其抗弯弹性模量,通过波浪水槽实验,研究规则波在不同刚度植物杆群内的流速分布、紊动特征及不同刚度杆群的消浪效果。实验结果表明,当波浪通过柔性杆群时,受其摆动的影响,流速周期变化从单峰型逐渐转变成双峰型,杆群刚度越小形成的二次波峰越明显;不同刚度杆群内水体紊动强度变化显示,杆群刚度越大,造成杆群内水体的紊动强度越大;随着杆群抗弯弹性模量的增大,其消浪系数也增大,消浪系数的增长与材料的抗弯弹性模量值非线性关系,而是在某一弹性模量范围内,对消浪系数的影响较为敏感。     

Fine‐scale diet of the Australian sea lion (Neophoca cinerea) using DNA‐based analysis of faeces

We applied DNA‐based faecal analysis to determine the diet of female Australian sea lions (n = 12) from two breeding colonies in South Australia. DNA dietary components of fish and cephalopods were amplified using the polymerase chain reaction and mitochondrial DNA primers targeting the short (~100 base pair) section of the 16S gene region. Prey diversity was determined by sequencing ~50 amplicons generated from clone libraries developed for each individual. Faecal DNA was also combined and cloned from multiple individuals at each colony and fish diversity determined. Diets varied between individuals and sites. Overall, DNA analysis identified a broad diversity of prey comprising 23 fish and five cephalopod taxa, including many species not previously described as prey of the Australian sea lion. Labridae (wrasse), Monacanthidae (leatherjackets) and Mullidae (goat fish) were important fish prey taxa. Commonly identified cephalopods were Octopodidae (octopus), Loliginidae (calamary squid) and Sepiidae (cuttlefish). Comparisons of fish prey diversity determined by pooling faecal DNA from several samples provided a reasonable but incomplete resemblance (55–71%) to the total fish diversity identified across individual diets at each site. Interpretation of diet based on the recovery of prey hard‐parts identified one cephalopod beak (Octopus sp.) and one fish otolith (Parapriacanthus elongatus). The present study highlights the value of DNA‐based analyses and their capabilities to enhance information of trophic interactions.     

Evolution of sedimentary basins from the standpoint of petroleum origin and accumulation—an approach for a quantitative basin study

Generation, migration and accumulation of petroleum in a sedimentary basin is a function of geologic, hydrodynamic and thermodynamic development of the basin and the type and amount of organic matter. Temperature history not only determines rate of hydrocarbon generation, but also affects paleohydrodynamics and physical and thermal properties vs depth relationships. Therefore, paleotemperature is the most important parameter. Paleohydrodynamics together with geologic history of the basin is important in shaping secondary migration patterns and accumulation of hydrocarbons.Quantification of all the above processes is complicated. Steps in constructing a deterministic dynamic model for calculation of petroleum potential during a sedimentary basin development are stated and analyzed in this paper. The effect of paleotemperature variations on petroleum generation and on physical properties of sedimentary sequences are illustrated by numerical examples. Computer models will enable exploration geologists to make quantitative exploration predictions in sedimentary basins.     

Geo-Characterization at selected accelerometric stations in Crete (Greece) and comparison of earthquake data recordings with EC8 elastic spectra

To estimate the seismic response according to Eurocode (EC8) and almost all other national codes, site conditions have to be properly characterized so that soil amplification and the corresponding peak ground motion can be calculated. In this work, different geophysical and geotechnical methods are combined in order to define the detailed ground conditions in selected sites of the Hellenic Accelerometric Network (HAN) in Crete. For this purpose, the geological information of the sites and shear wave velocity, calculated from surface wave measurements, is used. Additionally, ground acceleration data recorded through HAN have been utilized from intermediate depth earthquakes in the broader area of South Aegean Sea. Using the recorded ground motion data and the procedure defined in EC8, the corresponding elastic response spectrum is calculated for the selected sites. The resulting information is compared to the values defined in the corresponding EC8 spectrum for the seismic zone that includes the island of Crete. The comparison shows that accurate definition of ground type through geological, geotechnical and geophysical investigations is important. However, our current comparison focuses on the distribution of values rather than the absolute values of EC8-prescribed spectra, and the results should be considered in this context.     

Environmental Geochemistry of Iron and Manganese in Six Himalayan Lakes

The distribution and abundance of iron and manganese, the two important mobile metals, in an aquatic environment have been presented. These metals play an important role in the binding of nutrients and toxic elements by virtue of their high specific area in the oxide form. The concentration of Fe ranged from 1.08 to 5.2 mg/g and that of Mn from 0.27 to 2.17 mg/g. The Dal lake sediments were rich in Fe and those of the Wular lake had the lowest mean concentration of Fe. It was observed that the smaller particle size fractions had a higher metal content in comparison to large size fractions. Data on the selective extraction of Fe and Mn and their accumulation in humus material have also been given.