Geophysiology and Parahistology of the Interactions of Organisms with the Environment*

Abstract. Ecology and Global Ecology (GE) are terms by which the relations between the organism (or living matter as a whole) and the environment (or Earth as a whole) have been treated for almost a century. Geophysiology and Parahistology (PH) are terms slowly replacing older scientific thoughts jointly with an increasing number of modifications and alterations of the Darwinian Evolution (DE) concept. Somehow Geophysiology and Parahistology seem to describe evolution in a non-Darwinian domain. According to V.I. Vernadsky (1929,1930,1988) - the great Russian naturalist and biogeochemist - the biogeochemical processes on Earth are controlled by the force of living matter rather than by species associations developing in and with individual ecosystems as expressed by darwinian evolutionary terms. He also claimed that Goethe was incorrectly regarded as a predecessor of DE by some authors (including Darwin) and that “Natur” (nature) and “Lebendige Natur” (the totality of creatures) are two very different things for Goethe. Detailed analyses of microbial mat systems in the German Wadden Sea and in artificial hypersaline WInogradsky columns have shown that the totality of creatures and matter around them i.e., the “lebendige Natur”sensu Goethe or “living matter”sensu Vernadsky of such environments control to a considerable extent the structure, stability. and (geo-)morphology of sediments and thereby the geological structure of the living Earth. These structures do not follow the rules of sedimentation formulated by the laws of Stokes They represent growth structures (Aufwuchs), whose physics and dynamics are controlled by complex fractal systems. The factors controlling the ultimate shape and stabilisation potential of the eventually resulting rocks and fossils are comparable to tissue development in macroorganisms. Also, certain microbial associations in the sub-recent and in the fossil record may be compared to metazoan tissues. Chemical gradients in the sedimentary column, regulated by the interplay of living matter and sluggish (slow-reactive to non-reactive) compounds, combine to create a pattern of porosity and structure of the resulting deposits that clearly indicates microbial influences and especially those of extracellular polymeric substances on the morphology and texture. The combined effects of microbiota or living matter on the sedimentary record are described as parahistology of sediments in analogy of the histology of tissue on a geological scale. This conceptual living tissue made up of microbially generated rocks and ore deposits cycled through metabolic processes and forced into tissue-like structures by microbial biofilms and mats may extend down to the upper mantle of Earth and far up into the stratosphere when Earth is regarded as a living entity over geological periods. We may have to conceive Earth as a living specimen, which is breathing at a frequency of thousands of years instead of the normal physiological breathing rate of man or an insect. Macroorganisms in all terrestrial systems represent the transport and logistic media, which, however, utterly depend on myriads of intra-, inter-, and extracellular microbial symbiotic partners.     

Histopathological changes in the liver of dab (Limanda limanda) from a contamination gradient in the North sea

As part of a joint workshop organised by the International Council for the Exploration of the Sea (ICES) and the Intergovernmental Oceanographic Commission (IOC) on biological effects monitoring techniques. dad (Limanda limanda) were examined from six spaced stations along a 200 km transect extending from near the mouth of the Elbe River out to the Dogger Bank in the North Sea. Based on historical data, differences in contaminant concentrations in sediments exist along the transect (lipophilic organic xenobiotics at the inshore sites and heavy metals offshore over the Dogger Bank). The most contaminated site sampled was the most inshore, the least contaminated was approximately midway along the transect, with contamination building up again over the farthest point along the transect, over the Dogger Bank. Multiple organs and tissues were examined for full pathology from each fish sampled. Only liver data are presented here (11–20 livers per station). The most significant lesions were considered to be well-developed foci of cellular alteration, high mitotic activity and high neutral lipid accumulation in livers from dab sampled from the most inshore site examined. Livers from the least-contaminated station showed minimal evidence of such changes. Foci of cellular alteration and neutral lipid accumulation were also seen in dab liver sampled from fish from the Dogger Bank site. Thus far, the hepatic changes seen correlate well with the most contaminated sites along the transect. The value of comprehensively examining the histopathology of an organ of toxicological significance, such as the liver in a European species of flatfish, is demonstrated.     

Vertical variations of the chlorophyll maximum during a red tide in a shallow lagoon

The results of eight sets of repeated observations on the vertical variations of the chlorophyll maximum layer in a shallow lagoon during a red tide show that these were more frequently hydrologically induced, rather than due to active vertical migrations of the red tide-forming organism. These results are discussed and compared to those existing in the literature, with special regard to the role of light and nitrogen in conditioning vertical migrations in red tide-forming dinoflagellates.     

Estimation of Contamination of ERS-2 and POSEIDON Satellite Radar Altimetry Close to the Coasts of Australia

It is broadly acknowledged that the precision of satellite-altimeter-measured instantaneous sea surface heights (SSH) is lower in coastal regions than in open oceans, due partly to contamination of the radar return from the coastal sea-surface state and from land topography. This study investigates the behavior of ERS-2 and POSEIDON altimeter waveform data in coastal regions and estimates a boundary around Australia's coasts in which the altimeter range may be poorly estimated by on-satellite tracking software. Over one million 20 Hz ERS-2 (March to April 1999) and POSEIDON (January 1998 to January 1999) radar altimeter waveform data were used over an area extending 350 km offshore Australia. The DS759.2 (5'resolution) ocean depth model and the GSHHS (0.2 km resolution) shoreline model were used together to define the coastal regions. Using the 50% threshold retracking points as the estimates of expected tracking gate, we determined that the sea surface height is contaminated out to maximum distance of between about 8 km and 22 km from the Australian shoreline for ERS-2, depending partly on coastal topography. Using the standard deviation of the mean waveforms as an indication of the general variability of the altimeter returns in the Australian coastal region shows obvious coastal contamination out to about 4 km for both altimeters, and less obvious contamination out to about 8 km for POSEIDON and 10 km for ERS-2. Therefore, ERS-2 and POSEIDON satellite altimeter data should be treated with some caution for distances less than about 22 km from the Australian coast and probably ignored altogether for distances less than 4 km.     

Application of the Genetic Algorithm to the Problem of Reconstruction of Missing Data

We study the problem of reconstruction (interpolation and extrapolation) of the vertical profiles of hydrochemical and hydrobiological elements according to incomplete sets of data with simultaneous filtration of short-period components based on expansions in empirical orthogonal functions. The genetic algorithm is used to compute the coefficients of expansion of profiles with missing data. We present the results of processing the data arrays on oxygen, chlorophyll A, and biogenic elements collected in the Black Sea in 1982–1993. The mean error of reconstruction of the profiles enables us to conclude that the proposed method has considerable advantages over the conventional approaches.     

The expression of CYP1A,vitellogenin and zona radiata proteins in Atlantic salmon (Salmo salar) after oral dosing with two commercial PBDE flame retardant mixtures: absence of short-term responses

The short-term effects of the commercial PBDE flame retardant mixtures Penta-BDE and cta-BDE on the expression of cytochrome P450 1A (CYP1A), vitellogenin (Vtg) and zona radiata proteins (Zrp) were investigated in juvenile salmon (Salmo salar). For this purpose, groups of fish were dosed twice (oral intake at days I and 4) with 10 and 50 mg/kg body weight of both commercial mixtures. The fishes were sacrificed at day 7 (n = 5 for each group) and 14 (n = 6 for each group), and blood, liver, fillet, and brain were collected. Blanks and positive controls were also part of the experiment. The expressions of Vtg, Zrp, and CYPIA were measured with several techniques (EROD, ELISA, Western, Northern and Slot Blot). The values in the groups of fish treated with Penta-BDE or Octa-BDE did not significantly differ from the reference group for any of the parameters tested. In contrast, the positive control groups treated with estradiol-17beta for Vtg and Zrp expression, and beta-naphthoflavone for CYP1A expression did show a significant response, indicating the potential sensitivity of the fishes for the parameters measured. Since the results of the chemical analyses showed concentrations of a number of PBDE congeners in liver, fillet, and brain that were about three orders of magnitude above those of fish from the North Sea, it is concluded that the short-term toxicity of both commercial PBDE mixtures for these endpoints was low.