Characterisation of Heterotrophic Microorganisms Isolated form the "Grotta Azzura" of Cape Palinuro (Salerno, Italy)

Abstract. Hydrothermal vent ecosystems have been extensively investigated during the last 20 years; shallow water hot springs (typically found below 50 m depth) have also been studied, and from these ecosystems many thermophilic and hyperthermophilic organisms were isolated and described.
The submarine caves of Cape Palinuro were discovered long ago, but only during the last decades were geological and biological investigations carried out, yielding a large number of reports on this fascinating environment. During the last two years, several samples of water, mud, and/or bacterial mat were collected within the "Grotta Azzurra", and enrichment experiments were performed using peptone, starch, glucose or pullulan as main organic nutrients. Many heterotrophic strains were isolated and most of them grew optimally between 37 and 43 ° C with the addition of 0-2 % NaCl. Growth was usually observed between 10 and 50 ° C the range of growth pH was 4 to 9, and NaCl concentrations up to 10–12 % were tolerated in most cases.
The analysis of 16S rDNA performed with the most representative isolates showed a close phylogenetic relationship with the genera Bacillus, Vibrio, Citrobacter and Escherichia. Moreover, an isolate showing morphological and physiological similarities with the genus Enterococcus was characterised and taxonomically described based on the 16S rDNA sequence.     

Oxidative damage to DNA: an immunohistochemical approach for detection of 7,8-dihydro-8-oxodeoxyguanosine in marine organisms

The modified nucleoside 7,8-dihydro-8-oxodeoxyguanosine (8-oxo-dG) is an index of oxidative DNA damage. An immunohistochemical approach based on the use of monoclonal antibody 1F7 against 8-oxo-dG was investigated in marine organisms with immunoperoxidase and immunofluorescent detection. Relative staining intensity as a measure of the 8-oxo-dG level was microscopically assessed. After laboratory exposures to benzo[a]pyrene (B[a]P), higher levels of oxidative DNA damage were clearly detected in all treated animals compared to controls. While this method eliminates DNA extraction reducing the processing of biological samples, absolute values are not provided. Further, the method requires only small amounts of tissue and potentially discriminates susceptibility to oxidative damage in different cell types. These results suggest that the assay should have practical applications in marine ecotoxicology.     

Antioxidant efficiency and detoxification enzymes in spotted dogfish Scyliorhinus canicula

Although elasmobranchs are widely distributed species, commonly found on sandy, gravely or muddy bottoms, several biological aspects of their metabolism still remain poorly investigated. In this work the efficiency of antioxidant system and detoxification enzymes were investigated in the coastal spotted dogfish Scyliorhinus canicula and in the red mullet Mullus barbatus for comparison with a teleost species. Organisms were sampled during a bottom trawl survey and analyzed for the biotransformation activity (EROD), levels of metallothioneins, catalase, glutathione S-transferases and total oxyradical scavenging capacity (TOSC) toward peroxyl radicals and hydroxyl radicals. EROD activity in the elasmobranchs was more than one order of magnitude lower than in the red mullets, while similar levels of metallothioneins were measured in these species. S. canicula showed significantly lower antioxidant enzymes and a more reduced efficiency in neutralizing *OH; on the other hand the scavenging capability toward ROO* was comparable in S. canicula and M. barbatus.     

Disturbance and Community Pattern of Polychaetes Inhabiting Valle Magnavacca (Valli di Comacchio,Northern Adriatic Sea,Italy)

Abstract. Polychaete community structure in Valle Magnavacca, the largest basin of the Valli di Comacchio (Northern Adriatic Sea) lagoonal ecosystem, was analyzed in a three‐year study. Three shallow‐water stations were sampled at about 3‐month intervals. Univariate and multivariate analyses were utilized to investigate community structure changes in relation to natural and man‐induced disturbance. The polychaete community at station 3, in the central area of the lagoon, was the most disturbed, while that of station 2 was the most well structured. We hypothesize that polychaete community structure results from regular seasonal disturbances which lead to almost predictable fluctuations in species abundance. Superimposed on these regular cycles are acute disturbance events that further reduce species abundance or exclude species from the habitat.     

Wave-height distributions and nonlinear effects

Theoretical distributions proposed for describing the crest-to-trough heights of linear waves are reviewed briefly. To explore the effects of nonlinearities, these are generalized to second-order waves, utilizing quasi-deterministic results on the expected shape of large waves. The efficacy of Gram–Charlier models in describing the effects of third-order nonlinearities on the distributions of wave heights, crests and troughs are examined in detail. All models and a fifth-order Stokes–Rayleigh type model recently proposed are compared with linear and nonlinear waves simulated from the JONSWAP spectrum representative of long-crested extreme seas, and also with oceanic data gathered in the North Sea. Uncertainties arising from the variability of probability estimates derived from sample populations of limited size are considered. Ultimately, the comparisons show that nonlinearities do not have any discernable effect on the crest-to-trough heights of oceanic waves. Most of the linear models considered yield similar and reasonable predictions of the observed data trends. Gram–Charlier type distributions seem neither effective nor particularly useful in describing the statistics of large wave heights or crests under oceanic conditions. However, they do surprisingly well in predicting unusually large wave heights and crests observed in some 2D wave-flume experiments and 3D numerical simulations of long-crested narrow-band random waves.     

Magnesiochloritoid: Compressibility and high pressure structure refinement

The response of magnesiochloritoid to pressure has been studied by single crystal X-ray diffraction in a diamond anvil cell, using crystals with composition Mg_1.3Fe_0.7Al₄Si₂O₁₀(OH)₄. The unit cell parameters decrease from a = 9.434 (3), b = 5.452 (2), c = 18.136 (5) Å, β = 101.42° (2) (1 bar pressure) to a = 9.370 (7), b = 5.419 (5), c = 17.88 (1) Å, β = 101.5° (1) (42 kbar pressure), following a slightly anisotropic compression pattern (linear compressibilities parallel to unit cell edges: β _a = 1.85, β _b = 1.74, β_c = 3.05 × 10^?4 kbar^?1) with a bulk modulus of 1480 kbar. Perpendicular to c, the most compressible direction, the crystal structure (space group C2/c) consists of two kinds of alternating octahedral layers connected via isolated SiO₄ tetrahedra. With increasing pressure the slightly wavy layer [Mg_1.3Fe_0.7AlO₂(OH)₄] tends to flatten. Furthermore, the octahedra in this layer, with all cations underbonded, are more compressible than the octahedra in the (A1₃O₈) layer with slightly overbonded aluminum. Comparison between high-pressure and high-temperature data yields the following equations: $$\begin{gathered} a_{P,T} = 9.434{\text{ }}{\AA} - 174 \cdot 10^{ - 5} {\text{ }}{\AA}{\text{kb}}^{{\text{ - 1}}} \cdot P \hfill \\ {\text{ }} + 9 \cdot 10^{ - 5} {\text{ }}{\AA}^\circ C^{ - 1} \cdot (T - 25^\circ C) \hfill \\ b_{P,T} = 5.452{\text{ }}{\AA} - 95 \cdot 10^{ - 5} {\text{ }}{\AA}{\text{kb}}^{{\text{ - 1}}} \cdot P \hfill \\ {\text{ }} + 5 \cdot 65 \cdot 10^{ - 5} {\text{ }}{\AA}^\circ C^{ - 1} \cdot (T - 25^\circ C) \hfill \\ c_{P,T} = 18.136{\text{ }}{\AA} - 549 \cdot 10^{ - 5} {\text{ }}{\AA}{\text{kb}}^{{\text{ - 1}}} \cdot P \hfill \\ {\text{ }} + 16 \cdot 2^{ - 5} {\text{ }}{\AA}^\circ C^{ - 1} \cdot (T - 25^\circ C) \hfill \\ \end{gathered} $$ with P in kbar and T in °C. These equations indicate that the unit cell and bond geometry of magnesiochloritoid at formation conditions do not differ greatly from those at the outcrop conditions, e.g. the calculated unitcell volume is 917.3 ų at P = 16 kbar and T=500 °C, whereas the observed volume at room conditions is 914.4 ų. In addition, they show that the specific gravity increases from formation at depth to outcrop at surface conditions.     

Long-term growth and metropolitan spatial structures: an analysis of factors influencing urban patch size under different economic cycles

Urban forms are increasingly reflective of socio-economic change in metropolitan regions. The present study illustrates an original approach to identify latent mechanisms of urban growth through the analysis of metropolitan spatial structures and their proximate drivers of change. Urban transformations are evaluated here using built-up patches as the elementary analysis unit and background socio-economic attributes at four stages of the “city life cycle” (urbanization, suburbanization, dis-urbanization, re-urbanization). Regression models based on 13 indicators assessing urban patch area and shape, nearest neighbour urban patch area and shape, elevation, distance from 5 urban centres, 2 road infrastructures and sea coastline, were run with the aim to investigate direction and intensity of metropolitan growth in post-war Athens (1948–2012), a southern European city shifting from a compact mono-centric form towards discontinuous urban structures. Mono-centric configurations were characterized by linear dependence of urban patch size from the distance to central cities. Shifts toward scattered urban forms were associated with changes in the multivariate relationship between urban patch size and territorial drivers, pointing out the increased complexity of dispersed metropolitan structures. Our approach integrates economic and ecological visions of urban landscapes and contributes to understanding long-term mechanisms of metropolitan growth under dynamic spatial equilibriums. Investigating the multiple relationships between form and functions at the base of socio-economic transformations are relevant issues when identifying and profiling urbanization cycles.     

A thermo‐mechanical model for the catastrophic collapse of large landslides

In this work, a new thermo‐mechanical model is developed, applicable to large‐scale, deep‐seated landslides consisting of a coherent mass sliding on a thin clayey layer. The considered time window is that of catastrophic acceleration, starting at incipient failure and ending when the acquired displacement and velocity are such that the sliding material begins to break up into pieces. The model accounts for temperature rise in the slip zone due to the heat produced by friction, leading to water expansion, thermoplastic collapse of the soil skeleton, and subsequent increase of pore water pressure. The model incorporates the processes of heat production and diffusion, pore pressure generation and diffusion, and an advanced constitutive law for the thermo‐mechanical behavior of soil. An analysis of the Vajont landslide is presented as an example. A sensitivity analysis shows that friction softening is the mechanism most affecting the timescale of the final collapse of a slide, but also that the mechanism of thermal pressurization alone can cause a comparably catastrophic dynamic evolution. It is also shown that, all other factors being equal, thermo‐mechanical collapse will cause thicker slides to accelerate faster than shallow ones. Copyright © 2010 John Wiley & Sons, Ltd.     

Detection of Miocene saucer‐shaped sills (offshore Senegal) via integrated interpretation of seismic,magnetic and gravity data

The Atlantic margin offshore Senegal has been explored by seismic reflection and GRAV‐MAG surveys. High‐amplitude, laterally transgressive seismic reflectors are found to coincide with gravimetric and magnetic highs. Once seismic data are integrated with potential fields modelling, these reflectors can be safely interpreted as saucer‐shaped igneous sills, up to some hundreds of metres thick, some km wide. The occurrence of hydrothermal vent complexes and forced folds in the stratigraphic sequence above the sills constrain the intrusion age to the Miocene. Field observations and in‐situ magnetic susceptibility measurements of Oligocene–Miocene and Quaternary igneous rocks emplaced in coastal Senegal support this interpretation.