Simulating the surface waters of the Amazon River basin: impacts of new river geomorphic and flow parameterizations

This paper describes the impacts of new river geomorphic and flow parameterizations on the simulated surface waters dynamics of the Amazon River basin. Three major improvements to a hydrologic model are presented: (1) the river flow velocity equation is expanded to be dependent on river sinuosity and friction in addition to gradient forces; (2) equations defining the morphological characteristics of the river, such as river height, width and bankfull volume, are derived from 31 622 measurements of river morphology and applied within the model; (3) 1 km resolution topographic data from the Shuttle Radar Topography Mission (SRTM) are used to provide physically based fractional flooding of grid cells from a statistical representation of sub‐grid‐scale floodplain morphology. The discharge and floodplain inundation of the Amazon River is simulated for the period 1968–1998, validated against observations, and compared with results from a previous version of the model. These modifications result in considerable improvement in the simulations of the hydrological features of the Amazon River system. The major impact is that the average wet‐season flooded area on the Amazon mainstem for the period 1983–1988 is now within 5% of satellite‐derived estimates of flooded area, whereas the previous model overestimates the flooded area by about 80%. The improvements are a consequence of the new empirical river geomorphologic functions and the SRTM topography. The new formulation of the flow velocity equation results in increased river velocity on the mainstem and major tributaries and a better correlation between the mean monthly simulated and observed discharge. Copyright © 2007 John Wiley & Sons, Ltd.     

Seasonal and pollution-induced variations in biomarkers of transplanted mussels within the Beagle Channel

The occurrence of biomarker variations linked to environmental factors makes it difficult to distinguish the effect of pollution. In an attempt to evaluate spatial and seasonal effects of environmental parameters on biomarker responses, mussels Mytilus edulis chilensis coming from an aquaculture farm were transplanted to several points within Ushuaia Bay (Beagle Channel) for 6 weeks in summer and winter. Activities of superoxide dismutase, catalase, glutathione-S-transferase and levels of lipid peroxidation were measured in gills and digestive gland. Cu, Zn, Fe, Cd and Pb concentrations were also assessed. Results indicated a significant effect of seasons on biological responses as well as in metal bioaccumulation showing the influence of natural factors such as dissolved oxygen, temperature and food availability. The interdependence of those environmental factors is important for the homeostasis of thermoconformers, especially regarding their oxidative metabolism and should also be taken into consideration to distinguish natural from pollution-induced variations.     

Determining Biogenic Silica in Marine Samples by Tracking Silicate and Aluminium Concentrations in Alkaline Leaching Solutions

This study introduces an alkaline leaching technique for the simultaneous analysis of biogenic silica and aluminium in sediments. Measuring aluminium facilitates the discrimination between silica from the biogenic (BSiO₂) and the non-biogenic fraction, because it originates almost solely from the lithogenic phase. The method was tested using fine-grained silicagel, standard clay minerals, artificial sediments, and natural samples ranging from fresh diatoms to aged sediment from different depositional settings. To determine the BSiO₂ content, four different models each describing the dissolution curves, but of increasing complexity, were applied and for each different type of sample the optimum model was selected on the basis of F-test statistics. For mixtures of silicagel and clay minerals, the contribution of Si from the dissolution of clay was negligible compared to Si originating from silicagel. For natural samples with high clay content, complex dissolution curves were observed and single-phase first order dissolution was the exception. This deviation from `ideal' behavior could only be recognized because of high-resolution sampling, especially in the first 20 minutes of the experiment. For most of the samples, the distinction between the biogenic silica fraction and the silica originating from dissolution of clays could be made on the basis of the Si/Al ratios and reactivity constants of the dissolving phases calculated with the models. Clay minerals typically dissolve slowly at a Si/Al ratio close to 1–2, depending on the type of clay mineral. In contrast, biogenic silica displays a wide range of reactivities and Si/Al ratios. Fresh biogenic silica from the water column usually has a high reactivity and a low Al content. Aged biogenic silica from the sediments has a lower reactivity, but Si/Al ratios as low as 5 were found. The method as described here therefore presents an accurate method to analyze biogenic silica in marine sediments with a relatively high clay mineral content.     

Short-term under-ice variability of prokaryotic plankton communities in coastal Antarctic waters (Cape Hallett, Ross Sea)

During the 2006 Italian Antarctic expedition a diel sampling was performed close to Cape Hallett (Ross Sea) during the Austral summer. Under-ice seawater samples (4 m) were collected every 2 h for 28 h in order to estimate prokaryotic processes' variability and community structure dynamics. Prokaryotic and viral abundances, exoenzymatic activities (β-glucosidase, chitinase, lipase, alkaline phosphatase and leucine aminopeptidase), prokaryotic carbon production (³H-leucine incorporation) and community structure (Denaturing Gradient Gel Electrophoresis – DGGE fingerprints) were analysed. Results showed that the diel variability of the prokaryotic activity followed a variation in salinity, probably as a consequence of the periodical thawing of sea ice (driven by solar radiation and air temperature cycles), while negligible variation in viral and prokaryotic abundances occurred. The Bacterial and Archaeal community structures underwent an Operational Taxonomic Units (OTUs) temporal shift from the beginning to the end of the sampling, while Flavobacteria-specific primers highlighted high variations in this group possibly related to sea ice melting and substrate release.     

A single-crystal neutron and X-ray diffraction study of pezzottaite, Cs(Be2Li)Al2Si6O18

The chemical composition and the crystal structure of pezzottaite [ideal composition Cs(Be₂Li)Al₂Si₆O₁₈; space group: ${\it{R}} \overline{\text{3}} $ c, a?=?15.9615(6) ?, c?=?27.8568(9) ?] from the type locality in Ambatovita (central Madagascar) were investigated by electron microprobe analysis in wavelength dispersive mode, thermo-gravimetric analysis, Fourier-transform infrared spectroscopy, single-crystal X-ray (at 298?K) and neutron (at 2.3?K) diffraction. The average chemical formula of the sample of pezzottaite resulted ^Cs1,Cs2(Cs_0.565Rb_0.027K_0.017)_Σ0.600 ^Na1,Na2(Na_0.101Ca_0.024)_Σ0.125Be_2.078Li_0.922 ^Al1,Al2(Mg_0.002Mn_0.002Fe_0.003Al_1.978)_Σ1.985 ^Si1,Si2,Si3(Al_0.056Si_5.944)_Σ6O₁₈·0.27H₂O. The (unpolarized) IR spectrum over the region 3,800–600?cm^?1 was collected and a comparison with the absorption bands found in beryl carried out. In particular, two-weak absorption bands ascribable to the fundamental H₂O stretching vibrations (i.e. 3,591 and 3,545?cm^?1) were observed, despite the mineral being nominally anhydrous. The X-ray and neutron structure refinements showed: (a) a non-significant presence of aluminium, beryllium or lithium at the Si1, Si2 and Si3 sites, (b) the absence (at a significant level) of lithium at the octahedral Al1, Al2 and Al3 sites and (c) a partial lithium/beryllium disordering between tetrahedral Be and Li sites.     

The Planktonic foraminifera <Emphasis Type="Italic">Globigerinoides eoconglobatus</Emphasis> n. sp. in a glacial–interglacial context: IODP359 Sites U1467 and U1468

Here we define a new morphospecies of planktonic foraminifera Globigerinoides eoconglobatus n. sp., identified from International Ocean Discovery Program (IODP) expedition 359 samples from drift deposits of the Maldives, Inner Sea. Through biostratigraphic analysis, we infer it may be the direct ancestor of Globigerinoides conglobatus evolving from Globigerinoides obliquus in the Late Miocene (Subzone M13a). Globigerinoides eoconglobatus n. sp. can be distinguished from G. conglobatus through both its morphological traits and stable isotopic signature (δ¹⁸O and δ¹³C) in pre-adult and adult specimens. The most defining characteristic being its aperture height (AH). A variance in adult stable isotopic signals shows a possible difference in life strategies, possibly related to symbionts (presence/absence or concentration) and/or depth habitat. This work also tentatively shows G. eoconglobatus n. sp. and G. conglobatus abundances are linked to glacial–interglacial stages. Its low abundances and similarities to its descendent Globigerinoides conglobatus has likely accounted for it being unreported, until present, in both modern and fossil studies.     

The Transnational Assembling of Marina Bay,Singapore

From Shanghai's Pudong to Dubai's Marina, waterfront developments are increasingly popular urban forms worldwide. Drawing on the literature on urban assemblages, I explore how urban waterfronts are produced out of the transnational assembling of models, knowledge and expertise. My case study here is Marina Bay, Singapore, a landscape that like much of the rest of Singapore is a product of talent and ideas from elsewhere. In this paper, two strategies employed by Singapore's urban authorities to court global expertise for Marina Bay's development are examined – their formation of an international panel of experts in the fields of urban planning, policy and design, and their launching of international competitions to attract top design firms. Like transfer agents that enable policies to travel, I argue that these individuals and firms are situated within wider knowledge circuits that straddle the globe, and are thus well placed to filter and channel ideas from elsewhere to Singapore. Drawing on selected developments within Marina Bay, I trace the routes taken by these ideas, the changes they underwent as they travelled, as well as their relationships with the actors that facilitated their journeys. In doing so, I hope to demonstrate the usefulness of understanding the urban as more‐than‐territorial in both theory and practice.