Ecological indices tracking distinct impacts along disturbance-recovery gradients in a temperate NE Atlantic Estuary – Guidance on reference values

Results gathered from a monitoring programme on the Mondego Estuary (Western Coast of Portugal) were compliant with findings drawn from other studies, which pointed out that unstable environments, namely estuarine systems, constitute a great challenge for the use of environmental tools such as ecological indices. The Margalef Index, the Shannon–Wiener Index and AMBI were proposed to evaluate the ecological status of benthic communities in the scope of the European Water Framework Directive (WFD) in Portugal and other European member states. In this system these indices were not equally effective in tracking changes in benthic communities that expressed obvious responses to anthropogenic disturbances (eutrophic situations and severe physical disturbance) and to subsequent impacts' cessation. Natural variability played an important role on the indices' response, with estuarine gradient and habitat heterogeneity affecting the ranges of values obtained, and with extreme climate events slowing down the ongoing recovery process. Nonetheless, both natural and anthropogenic variability during the study period could be satisfactorily detected if we accounted for the information provided by all three indices. Based on the whole range of variation observed (a) as a response to different kinds of impacts, and (b) along recovery gradients, as well as accounting for the natural driving forces acting upon estuarine benthic invertebrate communities, we propose a set of reference values for these three indices. This proposal aims at contributing to the implementation of classification tools within the scope of the European WFD.     

Chemical defenses against generalist fish predators and fouling organisms in two invasive ahermatypic corals in the genus Tubastraea

The introduction of exotic marine species has caused considerable economic and ecological damage around the world. Some of these species possess adaptations such as secondary metabolites which facilitate their successful invasion into new areas. In this study we tested two hypotheses: (i) crude extracts produced by two invasive hard corals Tubastraea coccinea and Tubastraea tagusensis, introduced to the southwest Atlantic, inhibit predation by generalist fish; (ii) substances found in the crude extracts of both species reduce or enhance the settlement of other organisms. In an in situ palatability bioassay the extract of T. tagusensis reduced predation by generalist fish. The extracts of both species of coral showed species‐specific effects on fouling organisms in in situ gel plate bioassays. Control and extract plates had similar total cover, although plates with extracts had significantly fewer Cladophora sp., and Lithophyllum sp. was only detected on control gels. In contrast, a hydrozoan was only found on plates with extracts and overall community ordination demonstrated clear differences in the fouling communities between treatments. These results demonstrate that both coral species have chemical substances which can bring about a negative interaction with potential fish predators and competitors such as algal and invertebrate foulers and the advantage gained could explain their success in invading new regions to the detriment of local fauna and flora.     

Artificial Intelligence and headland-bay beaches

Headland-bay beaches are a typical feature of many of the world's coastlines. Their curved planform has aroused much interest since the early days of Coastal Engineering. Modelling this characteristic planform is a task of great interest, not least in relation to projects of coastal structures whose effects on the shoreline must be studied from the planning stages. In this work, Artificial Intelligence is applied to this task—in particular, artificial neural networks (ANNs). Unlike conventional planform models, they are not based on a given mathematical expression of the shoreline curve. Instead, they learn from experience (from a number of training cases) how the planform of a headland-bay beach is shaped, with due regard to the obliquity of incident waves. Three artificial neural networks, with different input/output structures, are implemented and subsequently trained with a number of bays. Once trained, they are tested for validation on other headland-bay beaches. Finally, the most performing neural network is compared with a state-of-the-art planform model.     

Fluorescence as a Tool for Tracing the Organic Contamination from Pulp Mill Effluents in Surface Waters

Three‐dimensional fluorescence spectra of water samples from an eucalyptus bleached kraft pulp mill and from a river, upstream and downstream of the discharge of the effluent, revealed the existence of a peak at δ_exc = 280 nm and δ_em = 340 nm Δδ = 60 nm), characteristic of effluentπs organic matter. Humic substances were isolated from the effluent by sequential adsorption onto resins XAD‐8 and XAD‐4 in series. Their synchronous fluorescence spectra with Δδ = 60 nm do also exhibit an intense signal at δ_exc = 280 nm (≈ 300 nm in the humic acid fraction). The peak is absent in the spectra of humic substances isolated from a non‐polluted site of the river, but it is clearly seen in the spectra of the humic substances from a site downstream of the discharge of the effluent. Synchronous fluorescence spectra (Δδ = 60 nm) of water samples from the river and its lagoon were recorded and revealed to be an easy and fast way of tracing the organic contamination from the effluent.     

Tidal and river discharge forcing upon water and sediment circulation at a rock-bound estuary (Guadiana estuary,Portugal)

The relative impacts of tidal (neap, spring) and river discharge (including a flood event) forcing upon water and sediment circulation have been examined at the rock-bound Guadiana estuary. Near-bed and vertical profiles of current, salinity, turbidity, plus surface suspended sediment concentrations (SSC, at some stations only), were collected at the lower and central/upper estuary during tidal and fortnightly cycles. In addition, vertical salinity and turbidity profiles were collected around high and low water along the estuary. Tidal asymmetry produced faster currents on the ebb than on the flood, especially at the mouth. This pattern of seaward current dominance was enhanced with increasing river flow, due to horizontal advection that was confined within the narrow estuarine channel. The freshwater inputs and, at a degree less, the tidal range controlled the vertical mixing and stratification importance. Well-mixed (spring) and partially stratified (neap) conditions alternated during periods of low river flows, with significant intratidal variations induced by tidal straining (especially at the partially stratified estuary). Highly stratified conditions developed with increasing river discharge. Intratidal variability in the pycnocline depth and thickness resulted from current shear during the ebb. A salt wedge with tidal motion was observed at the lower estuary during the flood event. Depending on the intensity of turbulent mixing, the residual water circulation was dominantly controlled either by tidal asymmetry or gravitational circulation. The SSC was governed by cyclical local processes (resuspension, deposition, mixing, advection) driven by the neap-spring fluctuations in tidal current velocities. More, intratidal variability in stratification indicated the significance of tidal pumping at the partially and highly stratified estuary. The estuary turbidity maximum (ETM) was enhanced with increasing current velocities, and displaced downstream during periods of high river discharge. During the flood event, the ETM was expelled out of the estuary, and the SSC along the estuary was controlled by the sediment load from the drainage basin. Under these highly variable river flow conditions, our observations suggest that sand is exported to the nearshore over the long-term (>years).     

Cenozoic tectonic evolution in the Central Andes in northern Chile and west central Bolivia: implications for paleogeographic, magmatic and mountain building evolution

A review of available stratigraphic, structural, and magmatic evolution in northernmost Chile, and adjacent Peru and Bolivia shows that in this region: (1) compression on the Paleogene intra-arc during the middle Eocene Incaic phase formed the NNE-SSW-oriented Incaic range along the present-day Precordillera and Western Cordillera, and (2) post-Incaic tectonic conditions remained compressive until present, contrasting with other regions of the Andes, where extensional episodes occurred during part of this time lapse. A late Oligocene–early Miocene peak of deformation caused further uplift. The Incaic range formed a pop-up structure bounded by two thrusts systems of diverging vergencies; it represented a major paleogeographic feature that separated two domains with different tectonic and paleogeographic evolutions, and probably formed the Andean water divide. This range has been affected by intense erosion and was symmetrically flanked by two major basins, the Pampa del Tamarugal and the Altiplano. Magmatic activity remained located along the previous Late Cretaceous–early Eocene arc with slight eastward shift. Further compression caused westvergent thrusting and uplift along the western Eastern Cordillera bounding the Altiplano basin to the east by another pop-up shaped ridge. Eastward progression of deformation caused eastvergent thrusting of the Eastern Cordillera and Subandean zone.     

Assessing aquifer vulnerability to pollutants by electrical resistivity tomography (ERT) at a nitrate vulnerable zone in NE Spain

There is an increasing demand for groundwater vulnerability maps which illustrate the exposure of aquifers against pollution. These maps show areas of greatest potential for groundwater contamination on the basis of local subsurface conditions. Parameters affecting vulnerability are mainly permeability and thickness of each protective layer. For unconsolidated sediments, the permeability is strongly related to the clay content, which can be deduced from indirect resistivity methods, like electrical-imaging. Such geophysical methods can be of great help in groundwater vulnerability studies because they disturb neither the structure nor the dynamics of the soil. Sensibility analysis was performed of the electrical resistivity tomography method for accurately mapping soil media. Managers and public administrators may effectively use this method for assessing the potential risk of groundwater contamination. In the studied zone, electrical resistivity exhibits a wide range of variability that can be easily correlated to soil parameters, such as clay content and hydraulic conductivity. A numerical index of protection has been assessed from the geophysical information derived from 2D electrical resistivity tomography. This work represents a preliminary approach on the natural vulnerability evaluation of shallow aquifers at the Empordà basin (NE Spain) that is highly affected by diffuse pollution by nitrates.     

Tectonic evolution of an intraplate basin: the Lower Tagus Cenozoic Basin,Portugal

This article focuses on the reinterpretation of well, seismic reflection, magnetic, gravimetric, surface wave and geological surface data, together with the acquisition of seismic noise data to study the Lower Tagus Cenozoic Basin tectono‐sedimentary evolution. For the first time, the structure of the base of the basin in its distal and intermediate sectors is unravelled, which was previously only known in the areas covered by seismic reflection data (distal and small part of intermediate sectors). A complex geometry was found, with three subbasins delimited by NNE‐SSW faults and separated by WNW‐ESE to NW‐SE oriented horsts. In the area covered by seismic reflection data, four horizons were studied: top of the Upper Miocene, Lower to Middle Miocene top, the top of the Palaeogene and the base of Cenozoic. Seismic data show that the major filling of the basin occurred during Upper Miocene. The fault pattern affecting Neogene and Palaeogene units derived here points to that of a polyphasic basin. In the Palaeogene, the Vila Franca de Xira (VFX) and a NNE‐SSW trending previously unknown structure (ABC fault zone) probably acted as the major strike‐slip fault zones of the releasing bend of a pull‐apart basin, which produced a WNW‐ESE to NW‐SE fault system with transtensional kinematic. During the Neogene, as the stress regime rotated anticlockwise to the present NW‐SE to WNW‐ESE orientation, the VFX and Azambuja fault zones acted as the major transpressive fault zones and Mesozoic rocks overthrusted Miocene sediments. The reactivation of WNW‐ESE to NW‐SE fault systems with a dextral strike‐slip component generated a series of horsts and grabens and the partitioning of the basin into several subbasins. Therefore, we propose a polyphasic model for the area, with the formation of an early pull‐apart basin during the Palaeogene caused by an Iberia–Eurasia plates collision that later evolved into an incipient foreland basin along the Neogene due to a NW‐SE to WNE‐ESE oriented Iberia–Nubia convergence. This convergence is producing uplift in the area since the Quaternary except for the Tagus estuary subbasin around the VFX fault, where subsidence is observed. This may be due to the locking or the development of a larger component of strike‐slip movement of the NNE‐SSW to N‐S thrust fault system with the exception of the VFX fault, which is more favourably oriented to the maximum compressive stress.     

Nanomineralogy of evaporative precipitation of efflorescent compounds from coal mine drainage

Efflorescent nanophases(NPs)are found as a transitory accumulation of potentially hazardous elements(PHEs),particularly in tropical climates.The central objective of this study was to investigate the distribution of PHEs with NPs through the evaporative formation structures(EFS)of enormously PHEs-rich coal-mine drainages(CMD).The EFS were studied in natural coal mine drainage for five months in order to determine their geochemical and ecological structures and to assess their position in the reduction of PHEs in nature.The largest coal-fired power plant in South America,located in south Brazil,is used as an example of such a problem.In this work,a novel methodology for the analysis of PHEs in CMD precipitates is proposed for this affected coal area.The analytical method,combining X-Ray Diffraction(XRD)and advanced electron microscopies,shows the importance of nanomineralogy in understanding different circumstances of coal contamination.Several ultrafine-nanoparticles(UNPs)were identified in the sampled soils and river sediments together with the PHEs.A decrease in PHEs was identified in association with UNPs.However,further investigations are required with regard to the mobility of PHEs in water,atmosphere,soils,and sediments.The EPS was thoroughly studied,acquiring suitable understanding with investigational facts for Ca and Fe-sulphates,pickeringite,and several amorphous phases.     

Transpiration in Quercus suber trees under shallow water table conditions: the role of soil and groundwater

Water is one of the major environmental factors limiting plant growth and survival in the Mediterranean region. Quercus suber L. woodlands occupy vast areas in the Iberian Peninsula, frequently under shallow water table conditions. The relative magnitude of soil and groundwater uptake to supply transpiration is not easy to evaluate under these circumstances. We recently developed a conceptual framework for the functioning of the root system in Q. suber that simulates well tree transpiration, based on two types of root behaviour: shallow connected and deep connected. Although this significantly improved knowledge on the functional traits of Mediterranean Q. suber, the approach has the limitation of requiring root sap flow data, which are seldom available. In this work, we present alternative methodologies to assess if trees are connected to groundwater and to estimate the soil and groundwater contributions to tree transpiration. We provide evidence on the tree unrestricted access to groundwater solely based on meteorological, stem sap flow and leaf water potential data. Using a soil mass balance approach, we estimated the yearly soil and groundwater contributions to tree transpiration: 69.7% and 30.3%, respectively. Groundwater uptake became dominant in the dry summer: 73.2% of tree transpiration. Results reproduce extremely well those derived from root modelling. Because of its simplicity both in formulation and data requirements, our approach is potentially liable to be adapted to other groundwater‐dependent Mediterranean oak sites, where interactions between land use and water resources may be relevant. Copyright © 2013 John Wiley & Sons, Ltd.