Islands in a sea of sand: use of Acacia trees by tree skinks in the Kalahari Desert

In the Kalahari desert the tree skink Mabuya striata sparsa occupies Acacia trees separated by areas of open sand. On a single day in austral spring, the effects of tree size and structural complexity, presence of colonial nests of weavers, and fallen limbs on lizard abundance, and of time of day and air temperature on numbers of lizards active, location on trees, ground, or ground cover, and occupation of sunny, shaded, or partially shaded sites were examined. Multiple regression showed that the numbers of adult and total lizards increased with tree size, amount of ground cover, and air temperature. Neither number and size of sociable weaver nests nor complexity of tree shape affected lizard abundance. Proportions of lizards on trees and ground did not vary with time of day; neither did height above ground among individuals on trees. The proportions of lizards fully exposed to the sun was higher early and late in the day than at midday, when more lizards occupied shaded sites.     

Mesoscale variation in the photophysiology of the reef building coral Pocillopora damicornis along an environmental gradient

Spatial variation in the photophysiology of symbiotic dinoflagellates (zooxanthellae) of the scleractinian coral Pocillopora damicornis was examined along an environmental gradient in the Whitsunday Islands (Great Barrier Reef) at two depths (3 m and 6 m). Chlorophyll a fluorescence of photosystem II (PSII) and PAR-absorptivity measurements were conducted using an Imaging-PAM (pulse-amplitude-modulation) fluorometer. Most photophysiological parameters correlated with changes in environmental conditions quantified by differences in water quality along the gradient. For example, maximum quantum yield (F_v/F_m) increased and PAR-absorptivity decreased as water quality improved along the gradient from nearshore reefs (low irradiance, elevated nutrients and sediments) to outer islands (high irradiance, low nutrients and sediments). For apparent photosynthetic rate (PS_max) and minimum saturating irradiance (E_k), the direction of change differed depending on sampling depth, suggesting that different mechanisms of photo-acclimatisation operated between shallow and deep corals. Deep corals conformed to typical patterns of light/shade acclimatisation whereas shallow corals exhibited reduced PS_max and E_k with improving water quality coinciding with greater heat dissipation (NPQ₂₄₁). Furthermore, deep corals on nearshore reefs exhibited elevated Q₂₄₁ in comparison to outer islands possibly due to effects of sedimentation and/or pollutants rather than irradiance. These results highlight the importance of mesoscale sampling to obtain useful estimates of the variability of photophysiological parameters, particularly if such measures are to be used as bioindicators of the condition of coral reefs.     

Impact of halides on the photobleaching of dissolved organic matter

Understanding absorbance photobleaching of marine dissolved organic matter (DOM) is important because DOM chromophores impact oceanic primary productivity by affecting the depth of the photic zone, absorb UV radiation and affect ocean color used in remote sensing. However, the fundamental mechanisms which account for this bleaching are largely unknown. Controlled laboratory studies demonstrated that the presence of seawater concentrations of chloride and bromide ions enhanced absorbance photobleaching reaction rates by ~ 40%, regardless of DOM source or the presence or absence of carbonate ions. In contrast, halide ions generally did not affect fluorescence bleaching rates. Variations in ionic strength did not alter the enhancement in absorbance photobleaching by halide ions. Accordingly, the enhancement in absorbance photobleaching was specific to halide ions, rather than a generalized salinity effect. We confirmed the formation of hydroxyl radical (HO^•) in illuminated samples, and its significant scavenging in the presence of halide salts. Gamma-radiolysis experiments and associated modeling indicated that a small component (~ 12%) of the photobleaching enhancement by halides was consistent with the hypothesis that halide scavenging of HO^• will form reactive halogen radicals that target electron-rich chromophores within DOM more selectively than HO^•. The mechanism responsible for the major component of absorbance photobleaching rate enhancement by halides remains unresolved.     

Shoreface morphodynamics of a high-energy,steep and geologically constrained shoreline segment in Northern Ireland

The shoreface, a complex and poorly understood part of the coastal zone, plays a critical role in sediment transport processes between the beach and the inner shelf. This two-year study examined the surface and subsurface architecture and the process-response mechanisms of a high-energy, steep and geologically constrained shoreface segment (1–20 m depth) in Northern Ireland. Fourteen sequential bathymetric surveys, covering an area of ~ 2 km², were compared and analysed in order to investigate seabed changes and their relationship to wave and wind forcing. Results reveal that the shoreface is highly dynamic and complex. An examination of high-energy conditions and lower-than-average energy conditions revealed significant periods of both accretion and erosion. These complex morphodynamic responses are attributed mainly to a combination of antecedent (pre-survey) morphology, differences in wind forcing and coastal surges. A comparison of seabed changes over 2 yr reveals net shoreface accretion, which is attributed to inner-shelf to shoreface sediment transport. Over the same period, the adjacent West Strand beach showed moderate erosion. The study provides information on the morphodynamics of a steep, high-energy embayment shoreface, a coastal environment which has received little previous attention.     

Petrogenesis of carbonate-bearing nepheline syenites and carbonatites from Southern Victoria Land, Antarctica: origin of carbon and the effects of calcite-graphite equilibrium

Chemically-evolved carbonate-bearing nepheline syenites are intruded into basement metasediments of the Koettlitz Group on Dismal and Radian Ridges in the Pipecleaner Glacier region of Southern Victoria Land, Antarctica. Whole rock XRF data from the Dismal Nepheline Syenite defines a broad trend which is consistent with the removal of a cumulate fraction of approximate composition 70% hedenbergite, 15% nepheline, 10% titanite and 5% apatite. Stable isotope, major and trace element and mineralogical characteristics of the syenites are very similar to those of cross-cutting calcite-rich dykes indicating derivation from closely-related source magmas. The general association of carbonatites and nepheline syenites with extensional environments, suggests that the Dismal and Radian Ridge nepheline syenites and carbonatite dykes indicate a period of early Paleozoic (531 Ma) rifting or intrusion into localised tensional structures in an overall compressional regime. Assimilation of marble by the syenite magmas is evidenced by abundant rafts and xenoliths within the Dismal Nepheline Syenite, however, carbon and oxygen isotopic ratios from syenite and carbonatite calcites are distinctly lighter than values from the marble country rock indicating a magmatic source. Graphite and calcite commonly occur as aggregates in the Dismal Nepheline Syenite suggesting equilibrium between these two carbon-bearing phases. Isotopic fractionation between calcite and graphite, via the equilibrium: C + O₂ = CO₂ has resulted in enrichment of the ¹³C isotope in calcites from the Dismal Nepheline Syenite.     

Simulation of the 2014 Anomalous Warming in the Northeast Pacific

The Nucleus for European Modelling of the Ocean (NEMO) numerical model was used to simulate the North Pacific Ocean beginning in January 1960. The model had a horizontal resolution of 0.25^o, 46 vertical levels, and employed a spectral nudging assimilation scheme that, unlike standard nudging, nudges only specific frequency and wavenumber bands. This simulation was nudged to the mean and monthly Levitus climatology of potential temperature and salinity. The model was forced with mean monthly winds, net heat flux, and precipitation from the National Centers for Environmental Prediction (NCEP). The simulation was used to study a recent intrusion of much warmer and less saline water than normal from the west into the Gulf of Alaska, beginning in December 2013 and lasting until at least the early summer of 2014. The observed surface temperature anomalies were more than 4 standard deviations above normal. The model reproduced these anomalies in both a qualitative and quantitative manner, reproducing the same scale of anomalies over the region. An anomalous increase in the North Pacific Current (NPC) was found in the model in 2012 and the beginning of 2013, in agreement with observations. This increase in the NPC is associated with the positive phase of the North Pacific Gyre Oscillation. The causes of the temperature anomalies in the Gulf of Alaska could be due to three key factors: (i) an anomalously high, positive, surface heat flux in 2013 over the greater North Pacific; (ii) a significant decrease in the eastward flow of the NPC starting in late 2013 (with an accompanying decrease in cold water advection) after a period of historically strong eastward flow; and (iii) weaker winds throughout most of 2013 accompanied, however, by a shift to stronger northward winds (with an accompanying increase in warm water advection) in late 2013.     

Shipboard trials of an ozone-based ballast water treatment system

Legislation introduced by the United Nations International Maritime Organization (IMO) has focused primarily on standards defining successful treatments designed to remove invasive species entrained in ballast water. An earlier shipboard study found that ozone introduced into salt water ballast resulted in the formation of bromine compounds, measured as total residual oxidants (TRO) that were toxic to both bacteria and plankton. However, the diffuser system employed to deliver ozone to the ballast water tanks resulted in patchiness in TRO distribution and toxicity to entrained organisms. In this follow-up study, the shipboard diffuser system was replaced by a single Venturi-type injection system designed to deliver a more homogeneous biocide distribution. Within-tank variability in TRO levels and associated toxicity to zooplankton, phytoplankton and marine bacteria was measured via a matrix of tubes deployed to sample different locations in treated and untreated (control) tanks. Three trials were conducted aboard the oil tanker S/T Prince William Sound in the Strait of Juan de Fuca off Port Angeles, Washington State, USA, between June and December 2007. Mortalities of plankton and bacteria and oxidant concentrations were recorded for treated and untreated ballast water up to 3 days following treatment, and residual toxicity beyond this period was measured by bioassay of standard test organisms. Results indicated uniform compliance with current IMO standards, but only partial compliance with other existing and pending ballast water legislation.     

Drivers of peatland water table dynamics in the central Andes,Bolivia and Peru

Cushion plant dominated peatlands are key ecosystems in tropical alpine regions of the Andes in South America. The cushion plants have formed peat bodies over thousands of years that fill many valley bottoms, and the forage produced by the plants is critical for native and nonnative domesticated mammals. The sources and flow paths of water supporting these peatlands remain largely unknown. Some studies have suggested that glacier meltwater streams support some peatlands, and that the ongoing loss of glaciers and their meltwaters could lead to the loss or diminishment of peatlands. We analysed the hydrologic regime of 10 peatlands in four mountain regions of Bolivia and Peru using groundwater monitoring. Groundwater levels in peatlands were relatively stable and within 20 cm of the ground surface during the rainy season, and many sites had water tables 40–90 cm below the ground surface in the dry season. Topographic and groundwater elevations in the peatlands demonstrated that the water source of all 10 peatlands was hillslope groundwater flowing from lateral moraines, talus, colluvium, or bedrock aquifers into the peatlands. There was little to no input from streams, whether derived from glacier melt or other sources, and glacier melt could not have recharged the hillslope aquifers supporting peatlands. We measured the stable water isotopes in water samples taken during different seasons, distributed throughout the catchments, and the values are consistent with this interpretation. Our findings indicate that peatlands in the study region are recharged by hillslope groundwater discharge rather than stream water and may not be as vulnerable to glacial decline as other studies have indicated. However, both glaciers and peatlands are susceptible to changing thermal and precipitation regimes that could affect the persistence of peatlands.