Rhizosphere: A new frontier for soil biogeochemistry

A range of key biological functions of plant roots such as uptake, respiration and exudation can considerably alter biogeochemical parameters of the soil in the vicinity of the roots, i.e., the rhizosphere: concentrations of nutrients, toxic elements (e.g., aluminium) and pollutants, concentrations of complexing or chelating compounds, pH and redox potential, partial pressures of gases such as O₂ and CO₂, etc. Such parameters can also be directly influenced by the activities of soil microorganisms that are known to be stimulated by root exudation in the rhizosphere. Changes of biogeochemical parameters of the soil solution occurring in the rhizosphere influence a whole range of reactions at the soil solid/soil solution interface. Higher plants thereby play a key role in (i) the weathering of soil minerals, (ii) soil formation processes (pedogenesis) and (iii) the biogeochemistry of elements that are either beneficial or toxic to themselves and other soil biota.     

Strong Magnetic Levels in Lake Chapala Sediments (western Mexico): Their Mineralogy and Stratigraphic Significance

Lake Chapala, located 120 km northeast of Colima Volcano, lies at the north and northeast of the Citala rift in the Trans-Mexican Volcanic Belt. It belongs to the watershed of the Lerma River, which originates from the Mexico City area, 450 km to the east. Sediment cores, 0.5–2 m long, were collected from the lake. Magnetic susceptibility of the lake sediments generally ranges from 400 to 800 × 10⁻⁹ m³ kg⁻¹; but in some layers it exceeds 1000 or 1500 × 10⁻⁹ m³ kg⁻¹. The magnetic susceptibility vertical profiles display a thin peak (2–5 cm) or a double peak with magnetic susceptibility > 2000 × 10⁻⁹ m³ kg⁻¹. Scanning electron microscope analysis shows that the main mineral responsible for the magnetic susceptibility is titano-magnetite, which is relatively abundant in the magnetic layers. In most of the cores, the layer with magnetic susceptibility > 2000 × 10⁻⁹ m³ kg⁻¹ is coarser grained than the directly under and overlying sediments, which are composed of fine silt. But not all coarser levels are magnetic nor are all magnetic levels bound to coarser layers. The high titano-magnetic concentration probably originates from volcanic ash falls. Sedimentation rates, evaluated for several sites by means of the ²¹⁰Pb and ¹³⁷Cs methods, allow a date approximation (between 1535 and 1670) for the strong magnetic layer deposition. Since important eruptions of Colima Volcano, with ash fall, were reported from 1576 to 1623, the main peak of magnetic susceptibility in the sediment profiles is assumed to be related to these events. The main magnetic layer extends to greater depth in the profiles of the eastern part of the lake plain than at the west. It can, therefore, be suggested that a relative subsidence occurs in the eastern part of the lake; the axis of the eastern plain overlaps the area displaying the maximum subsidence rate and seems therefore to correspond to the prolongation of Citala rift.     

On asymmetries of solar spectral lines

The profiles of 43 lines have been observed at the centre and near the limb of the solar disk. Their asymmetry decreases towards the limb, and increases with the equivalent width and the mean heigth of line formation; no relation was found between the asymmetry and the line excitation potential, nor with the degree of ionization, nor with the usually adopted macroturbulent velocity. The asymmetry appears to be due to radial movements.     

Motion of energetic particles in a magnetospheric model including a convection electric field

A magnetospheric model including convection and corotation electric fields is developed. Drift shells and pitch-angle evolution are obtained through perturbation methods. The asymmetry of the shell is maximum in a plane different from the noon-midnight meridian. As a consequence the dip in fluxes is not maximum in this meridian and the amount of shift is shown to be directly proportional to the convection electric field intensity. It is inversely proportional to the energy or the pitch-angle of the particles.     

The Chimborazo sector collapse and debris avalanche: Deposit characteristics as evidence of emplacement mechanisms

Chimborazo is a Late Pleistocene to Holocene stratovolcano located at the southwest end of the main Ecuadorian volcanic arc. It experienced a large sector collapse and debris avalanche (DA) of the initial edifice (CH-I). This left a 4 km wide scar, removing 8.0 ± 0.5 km³ of the edifice. The debris avalanche deposit (DAD) is abundantly exposed throughout the Riobamba Basin to the Río Chambo, more than 35 km southeast of the volcano. The DAD averages a thickness of 40 m, covers about 280 km², and has a volume of > 11 km³. Two main DAD facies are recognized: block and mixed facies. The block facies is derived predominantly from edifice lava and forms > 80 vol.% of the DAD, with a probable volume increase of 15–25 vol.%. The mixed facies was essentially created by mixing brecciated edifice rock with substratum and is found mainly in distal and marginal areas. The DAD has clear surface ridges and hummocks, and internal structures such as jigsaw cracks, injections, and shear-zone features are widespread. Structures such as stretched blocks along the base contact indicate high basal shear. Substratum incorporation is directly observed at the base and is inferred from the presence of substratum-derived material in the DAD body. Based on the facies and structural interpretation, we propose an emplacement model of a lava-rich avalanche strongly cataclased before and/or during failure initiation. The flow mobilises and incorporates significant substrata (10–14 vol.%) while developing a fine lubricating basal layer. The substrata-dominated mixed facies is transported to the DAD interior and top in dykes invading previously-formed fractures.     

Influence of chronic exposure to silver and mercury in the field on the bioaccumulation potential of the bivalve Macoma balthica

In order to assess the adaptation to metals previously observed in the bioindicator organism, Macoma balthica, subjected to chronic contamination by silver and mercury in the French Loire estuary, the bioaccumulation potential of individual organisms originating from the contaminated Loire estuary and a relatively uncontaminated control estuary (Somme) was evaluated using both radiotracers and stable isotopes of Ag (80 μg Ag litre⁻¹) and Hg (100 μg Hg litre⁻¹). Clams from the contaminated estuary were more sensitive to Ag (LT₅₀ = 9d) than those originating from the Somme estuary (LT₅₀ > 15d), even though the former bioaccumulated Ag to a significantly lower degree. This is attributed to a consequence of the chronic stress induced by Ag while clams were living in their natural environment. Therefore, past history of trace metal contamination should be considered when evaluating the susceptibility of M. balthica to heavy metal exposure. Lower uptake rates obtained for Hg (during the initial uptake phase only) and for Ag in clams from the polluted estuary suggest the presence of an adaptive trait for survival in contaminated areas. However, the lower degree of bioconcentration observed for Ag was not sufficiently low to reduce the sensitivity of the organisms to Ag and allow them to resist the toxic stress. Clams that survived Ag or Hg exposure at LT₅₀ did not protect themselves against metal toxicity by accumulating a significantly lesser amount of these metals than clams which did not survive metal stress. The results suggest that the bioaccumulation potential of each individual was not a factor which can explain the survival ability of M. balthica exposed to chronic Ag and Hg contamination in estuaries. In this case, cellular, biochemical and genetic levels of adaptation are presumed to be of greater importance.     

Dynamics and fluxes of organic carbon and nitrogen in two Guiana Shield river basins impacted by deforestation and mining activities

Deforestation and mining activities have proven to be very damaging to rivers because these activities disturb the environmental characteristics of rivers. Thus, the concentrations of dissolved organic carbon (DOC), particulate organic carbon (POC), particulate nitrogen (PN), and Chlorophyll‐a (Chl‐a) were measured monthly during 2 hydrological years in the Maroni and Oyapock Rivers to assess the dynamics and fluxes of organic carbon and nitrogen in these 2 Guiana Shield basins, which have been strongly (Maroni) and weakly (Oyapock) impacted by deforestation and mining activities. The 2‐year time series show that DOC, POC, PN, and Chl‐a concentrations vary seasonally with discharge in both rivers, indicating a hydrologically dominated control. Temporal patterns of DOC, POC, and PN indicate that these variables show maximum concentrations in rising waters due to the yield of organic matter and nitrogen accumulated in soils, which are incorporated into the rivers during rainfall. However, the Chl‐a concentrations were at a maximum during low‐water stages. The C/N and C/Chl‐a ratios also showed a seasonal trend, with lower values during the low water periods due to an increase in algal biomass. During high water, the POC in both rivers is the result of terrestrial organic matter, whereas during low‐water autochthonous organic matter can reach up to 34% of the POC. The mean annual fluxes of TOC and PN were higher (4.56 × 10⁵ tonC year^?1 and 1.77 × 10⁴ tonN year^?1, respectively) in the Maroni River than those (1.84 × 10⁵ tonC year^?1 and 0.54 × 10⁴ tonN year^?1, respectively) in the Oyapock River. However, the specific fluxes of DOC, POC, and PN from both basins were nearly the same. Although gold mining activities are performed in both basins, there is no conclusive evidence regarding the impact of these activities on the dynamics of organic matter and particulate nitrogen in the Maroni and Oyapock Rivers.     

Morphodynamics of alternate bars in the presence of riparian vegetation

Alpine gravel-bed rivers are dynamic systems that have been subjected to many anthropic alterations in the past centuries. Riparian vegetation development on previously bare sediment bedforms has been a common adjustment, raising important management issues in terms of flood risks and biodiversity. Many of these rivers are also channelized, and as a result present a pattern of alternate bars. Considering recent advances in numerical biomorphodynamic modeling, this study aims at exploring numerically the morphodynamics of alternate bars in the presence of riparian vegetation. To this end, a dynamic vegetation module has been implemented on top of an existing morphodynamic model, accounting for ecological processes of seed dispersal, seedling recruitment, growth, and mortality. Numerical simulations have been performed on a simplified reach of a gravel-bed river with free migrating alternate bars at initial state. In this work 96 scenarios have been simulated, each representing 50 years of channel evolution, with different flood regimes characterized by various peak discharges and flood durations. Yearly peak discharge variability is explicitly modeled in 48 scenarios. Model outcomes present two possible equilibrium biomorphodynamic behaviors: stationary vegetated bars, or free migrating bars in the case of frequent vegetation removal during floods. This binary behavior holds true when the stochasticity of annual peak discharges is represented, and for a wide range of parameter values included in vegetation dynamic modeling. Transient mobility of vegetated bars is observed in specific configurations where large sediment deposits deflect the flow field, eroding bar heads. Modeled bar wavelengths are in the range of values predicted for free bars by linear bar theory, and remain far from the theoretical values of hybrid, steady bars. The shift from unvegetated migrating bars to steady vegetated bars seems to show that in these simulations vegetation constitutes a hydraulic forcing, leading to a shift from free bars to forced bars, with a final configuration largely inherited from the initial state. © 2019 John Wiley & Sons, Ltd.     

Ecophysiological differences between vesicomyid species and metabolic capabilities of their symbionts influence distribution patterns of the deep‐sea clams

This study provides an analysis of vesicomyid bivalve–symbiont community distribution across cold seep and hydrothermal vent areas in the Guaymas Basin (Gulf of California, Mexico). Using a combination of morphological and molecular approaches including fluorescent in situ hybridization (FISH), and electronic microscopy observations, vesicomyid clam species and their associated symbionts were characterized and results were analyzed in light of geochemical conditions and other on‐site observations. A greater diversity of vesicomyids was found at cold seep areas, where three different species were present (Phreagena soyoae [syn. kilmeri], Archivesica gigas, and Calyptogena pacifica). In contrast, A. gigas was the only species sampled across the hydrothermal vent area. The same haplotype of A. gigas was found in both hydrothermal vent and cold seep areas, highlighting possible contemporary exchanges among neighboring vents and seeps. In either ecosystem, molecular characterization of the symbionts confirmed the specificity between symbionts and hosts and supported the hypothesis of a predominantly vertical transmission. In addition, patterns of clams could reflect potential niche preferences for each species. The occurrence of numerous traces of vesicomyid movements on sediments in the sites colonized by A. gigas seemed to indicate that this species might have a better ability to move. Furthermore, variation in gill sulfur content could reveal a higher plasticity and sulfur storage capacity in A. gigas. Thus, the distribution of vesicomyid species across the chemosynthetic areas of the Guaymas Basin could be explained by differences in biological traits of the vesicomyid species that would allow A. gigas to more easily exploit transient and punctual sources of available sulfide than P. soyoae.