Particle fluxes in San Pedro Basin, California: A four-year record of sedimentation and physical forcing

Moored sediment traps were deployed from January 2004 through December 2007 at depths of 550 and 800 m in San Pedro Basin (SPB), CA (33°33.0′N, 118°26.5′W). Additionally, floating sediment traps were deployed at 100 and 200 m for periods of 12-24 h during spring 2005, fall 2007, and spring 2008. Average annual fluxes of mass, particulate organic carbon (POC), ??¹³C_org, particulate organic nitrogen (PON), ??¹⁵N-PON, biogenic silica (bSiO₂), calcium carbonate (CaCO₃), and detrital material (non-biogenic) were coupled with climate records and used to examine sedimentation patterns, vertical flux variability, and organic matter sources to this coastal region. Annual average flux values were determined by binning data by month and averaging the monthly averages. The average annual fluxes to 550 m were 516±42 mg/m² d for mass (sdom of the monthly averages, n=117), 3.18±0.26 mmol C/m² d for POC (n=111), 0.70±0.05 mmol/m² d for CaCO₃ (n=110), 1.31±0.21 mmol/m² d for bSiO₂ (n=115), and 0.35±0.03 mmol/m² d for PON (n=111). Fluxes to 800 and to 550 m were similar, within 10%. Annual average values of ??¹³C_org at 550 m were −21.8±0.2‰ (n=108), and ??¹⁵N averages were 8.9±0.2‰ (n=95). The timing of both high and low flux particle collection was synchronous between the two traps. Given the frequency of trap cup rotation (4-11 days), this argues for particle settling rates ≥83 m/d for both high and low flux periods. The moored traps were deployed over one of the wettest (2004-2005, 74.6 cm rainfall) and driest (2006-2007, 6.6 cm) rain years on record. There was poor correlation (Pearson's correlation coefficient, 95% confidence interval) of detrital mass flux with: C_org/N ratio (r=0.10, p=0.16); ??¹⁵N (r=−0.19, p=0.02); and rainfall (r=0.5, p=0.43), suggesting that runoff does not immediately cause increases in particle fluxes 15 km offshore. ??¹³C_org values suggest that most POC falling to the basin floor is marine derived. Coherence between satellite-derived chlorophyll a records from the trap location (±9 km² resolution) and SST data indicates that productivity and export occurs within a few days of upwelling and both of these parameters are reasonable predictors of POC export, with a time lag of a few days to 2 weeks (with no time lag—SeaWiFS chlorophyll a and POC flux, r=0.25, p=0.0014; chlorophyll a and bSiO₂ flux, r=0.28, p=0.0002).     

Response of the shortgrass steppe plant community to fire

Fire is an important driver of ecological pattern and process in grasslands worldwide, although its role in semi-arid systems is less well known. We used published studies and new experimental research to 1) provide a synthesis of existing knowledge of fire in the semi-arid grasslands of the North American Great Plains, and 2) assess the degree of similarity in semi-arid and mesic grassland responses to fire in this region. Based on published studies, burning has neutral to negative effects on aboveground productivity in semi-arid grasslands and variable effects on plant communities. To more rigorously assess fire effects, replicated experimental plots were established in ungrazed shortgrass steppe in northern Colorado and prescribed spring fire was applied in 2006 and 2007, 2006 only, or not at all. Aboveground net primary productivity decreased or remained unchanged with burning. Plant community changes included increases in perennial forbs, decreases in annual grasses and a positive response in annual forbs to the combination of fire and a wet spring in 2007. Combined, these results indicate that post-fire changes in productivity in semi-arid grasslands are neutral to negative, in contrast to positive responses in mesic grasslands, and not strongly negative as previously assumed.     

The Sloan Digital Sky Survey monitor telescope pipeline

The photometric calibration of the Sloan Digital Sky Survey (SDSS) is a multi‐step process which involves data from three different telescopes: the 1.0‐m telescope at the US Naval Observatory (USNO), Flagstaff Station, Arizona (which was used to establish the SDSS standard star network); the SDSS 0.5‐m Photometric Telescope (PT) at the Apache Point Observatory (APO), NewMexico (which calculates nightly extinctions and calibrates secondary patch transfer fields); and the SDSS 2.5‐m telescope at APO (which obtains the imaging data for the SDSS proper). In this paper, we describe the Monitor Telescope Pipeline, MTPIPE, the software pipeline used in processing the data from the single‐CCD telescopes used in the photometric calibration of the SDSS (i.e., the USNO 1.0‐m and the PT). We also describe transformation equations that convert photometry on the USNO‐1.0m u ′g ′r ′i ′z ′ system to photometry the SDSS 2.5m ugriz system and the results of various validation tests of the MTPIPE software. Further, we discuss the semi‐automated PT factory, which runs MTPIPE in the day‐to‐day standard SDSS operations at Fermilab. Finally, we discuss the use of MTPIPE in current SDSS‐related projects, including the Southern u ′g ′r ′i ′z ′ Standard Star project, the u ′g ′r ′i ′z ′ Open Star Clusters project, and the SDSS extension (SDSS‐II). (© 2006 WILEY‐VCH Verlag GmbH & Co. KGaA, Weinheim)     

Spatial Characteristics of Regional Wildfire Frequencies in Intermountain West Grass-Dominated Communities

Understanding the environmental factors that influence spatial patterns of rangeland wildfires facilitates both fire and land management decisions. I used discriminant analysis to examine ignition frequency of lightning-initiated fires in grass-dominated communities in the Intermountain West between 1980 and 1994, then mapped regional fire frequencies to illustrate spatial patterns. Two canonical discriminant functions effectively separate groups of high, medium, and low ignition frequencies, based on climate conditions and fuel characteristics. Regions of highest frequency tend to have large elevational differences, more mesic climates, and less annual grass cover. Spatial patterns of ignition frequencies tend to reflect local topography, with higher frequencies west of 119° W. Expansion of exotic annual grasses throughout the region may be reducing differences in ignition frequency between regions of highest and lowest frequency.     

Sampling of Chemical Constituents in Electrically Active Convective Systems: Results and Cautions

On flights of a P3-B turboprop and a WB-57F jet aircraft within thunderstorm systems, short term spikes (1–2 sec or less in duration) in NO and O₃ were recorded and are attributed to hot or cold discharges occurring on the aircraft fuselage or air sampling inlets. One such spike of only ∼300 msec duration reached 325 ppbv of NO on the flight of the jet aircraft while at 13.8 km altitude. In a lightning flash to the P3-B aircraft, production of NO (expected) and NO₂ (unexpected) were directly observed. The NO production was ∼ 1.7 x 10²² molecules/m of flash length. In the P3-B flight at 5.5 km altitude and over a distance of ∼ 275 km within a highly electrically active thunderstorm complex in the equatorial central Pacific Ocean, there was no evidence of production of O₃ or CO by lightning flashes or by any type of hot or cold discharge involved in the development of free-air lightning flashes.     

The effect of distribution of iron-oxyhydroxide grain coatings on the transport of bacterial cells in porous media

 Among the demonstrated processes influencing the transport of bacteria through aquifers, the deposition of cells on mineral surfaces is one of the most important. For example, understanding the transport of introduced bacteria through aquifers is essential to designing some in situ bioremediation schemes. The impact of the presence and distribution of Fe(III)-oxyhydroxide-coated sand grains on bacterial transport through porous media was evaluated in column experiments in which bacteria (short rods; 1.2 μm length) were eluted through columns of quartz sand (0.5–0.6 mm in diameter) for several conditions of chemical heterogeneity of mineral substrate. Fe(III)-oxyhydroxide-coated sand was present as 10% of the mass, and it was arranged in three treatments: (1) homogeneously distributed, and present as a discrete layer (2) at the top and (3) at the bottom of 14-cm-long sand columns. A pulse input of 10⁸ cells ml^–1 was introduced in an artificial groundwater solution flowing at 14 cm h^–1 through the column, and eluted cells were counted. Peak breakthrough occurred at 1.0 pore volume. A large proportion of cells were retained; 14.7–15.8% of the cells were recovered after three pore volumes of solution had eluted through clean quartz sand, and only 2.1–4.0% were recovered from the Fe(III)-oxyhydroxide-coated sand mixtures. The three physical arrangements of the chemical heterogeneity resulted in essentially the same breakthrough of cells, indicating that the spatial distribution of iron coating does not affect the transport of bacteria. The results of the column transport experiments, which mimic hydrogeological conditions encountered in field problems, are consistent with our mechanistic understanding of bacterial sorption. Received: 10 April 1996 · Accepted: 17 February 1997     

Effect of Spectral Resolution on the Mg II Index as a Measure of Solar Variability

The solar Mgii core-to-wing ratio is a useful index of UV variability throughout the solar cycle because it has been measured since 1978 in a series of successive satellite missions: Nimbus 7, Solar Mesosphere Explorer (SME), the NOAA 9–14 series, Upper Atmosphere Research Satellite (UARS), and ERS-2. Eventual construction of a single time series from 1978 to the present by combining these measurements will give a long record of almost daily UV variability to serve as a surrogate for estimating both UV and EUV solar radiation. Here we address the effect of spectral resolution on determination of both long-term and short-term solar variability from this index. We use UARS/SOLSTICE measurements of the Mgii line from October 1991 to December 1996 to study the effect of two spectral resolution regimes characteristic of existing measurements, 0.20 to 0.25 nm and 1.10 to 1.15 nm, on determination of the amplitude of 27-day rotational modulation and the more gradual change in chromospheric radiation in the declining phase of solar cycle 22. The two Mgii indices give solar variations that differ by a scaling factor of 2× for both the solar cycle change from 1992 to 1997 and the amplitude of 27-day modulation over the same period. Both types of measurements appear to yield solar signal equally well except at solar minimum when the solar changes become quite small.     

The dual isotopes of deep nitrate as a constraint on the cycle and budget of oceanic fixed nitrogen

We compare the output of an 18-box geochemical model of the ocean with measurements to investigate the controls on both the mean values and variation of nitrate δ¹⁵N and δ¹⁸O in the ocean interior. The δ¹⁸O of nitrate is our focus because it has been explored less in previous work. Denitrification raises the δ¹⁵N and δ¹⁸O of mean ocean nitrate by equal amounts above their input values for N₂ fixation (for δ¹⁵N) and nitrification (for δ¹⁸O), generating parallel gradients in the δ¹⁵N and δ¹⁸O of deep ocean nitrate. Partial nitrate assimilation in the photic zone also causes equivalent increases in the δ¹⁵N and δ¹⁸O of the residual nitrate that can be transported into the interior. However, the regeneration and nitrification of sinking N can be said to decouple the N and O isotopes of deep ocean nitrate, especially when the sinking N is produced in a low latitude region, where nitrate consumption is effectively complete. The δ¹⁵N of the regenerated nitrate is equivalent to that originally consumed, whereas the regeneration replaces nitrate previously elevated in δ¹⁸O due to denitrification or nitrate assimilation with nitrate having the δ¹⁸O of nitrification. This lowers the δ¹⁸O of mean ocean nitrate and weakens nitrate δ¹⁸O gradients in the interior relative to those in δ¹⁵N. This decoupling is characterized and quantified in the box model, and agreement with data shows its clear importance in the real ocean. At the same time, the model appears to generate overly strong gradients in both δ¹⁸O and δ¹⁵N within the ocean interior and a mean ocean nitrate δ¹⁸O that is higher than measured. This may be due to, in the model, too strong an impact of partial nitrate assimilation in the Southern Ocean on the δ¹⁵N and δ¹⁸O of preformed nitrate and/or too little cycling of intermediate-depth nitrate through the low latitude photic zone.