Multi-xenobiotic resistance in Mytilus edulis

Primers based on known multidrug resistance (MDR) protein sequences hybridized with Mytilus edulis cDNA and led to the amplification of two major bands (approximatly 350 and 2500 bases long) corresponding to fragments of expected size as compared to human MDR genes.MDR protein levels in mussel tissues can be quantified with an ELISA test using the monoclonal antibody C219.     

On the application of the units of measurement of the amount and composition of matter in oceanology

We consider the procedures of conversion of the conventional and out-of-system units of measurement of the amount and composition of matter used in oceanology to the International System of Units (SI). The coefficients of conversion are presented in the form of a table. We present the data on the units of measurement of mineralization (scales of salinity) of seawater for the oceanic range of its variability, freshened waters of internal seas, and brines. The contemporary concept of salinity as a dimensionless quantity is discussed.Translated from Morskoi Gidrofizicheskii Zhurnal, No. 4, pp. 61–72, July–August, 2004.     

Temperature of the ocean surface as an indicator of thermodynamic processes in the northwest Pacific

The numerical computations and analysis of the anomalies of temperature of the ocean surface in the northwest part of the Pacific Ocean were carried out on the basis of the archival data for 1960 and 1964–1985. A five-year period of general instability of the annual average temperature was revealed (1973–1977). In this period, the year 1974 was the coldest and the year 1977 was characterized as extremely warm. We performed the analysis of the interannual and annual variability of the anomalies of temperature of the ocean surface and revealed common features and distinctions of the seasonal evolution of these anomalies for years with substantially different temperature conditions. A quasistationary zone of maximally heated waters was discovered in the band located (independently of the year and season) between 36 and 46°N to the east of 140°E. This zone coincides in space with the zone of the subarctic front and the south part of the subarctic region. The influence of the meanders of the Kuroshio Current was demonstrated. It is shown that their activity increases after the events of El-Niño and, hence, the thermal energy of the water area considerably increases and remains elevated for a period of 1–2 yr after the indicated events.Translated from Morskoi Gidrofizicheskii Zhurnal, No. 5, pp. 45–52, September–October, 2004.This revised version was published online in May 2005 with corrections to cover date.     

Late Holocene estuarine–inner shelf interactions; is there evidence of an estuarine retreat path for Tampa Bay, Florida?

The purpose of this study was to determine if and how a large, modern estuarine system, situated in the middle of an ancient carbonate platform, has affected its adjacent inner shelf both in the past during the last, post-glacial sea-level rise and during the present. An additional purpose was to determine if and how this inner shelf seaward of a major estuary differed from the inner shelves located just to the north and south but seaward of barrier-island shorelines. Through side-scan sonar mosaicking, bathymetric studies, and ground-truthing using surface grab samples as well as diver observations, two large submarine sand plains were mapped – one being the modern ebb-tidal delta and the other interpreted to be a relict ebb-tidal delta formed earlier in the Holocene. The most seaward portion of the inner shelf studied consists of a field of lobate, bathymetrically elevated, fine-sand accumulations, which were interpreted to be sediment-starved 3D dunes surrounded by small 2D dunes composed of coarse molluscan shell gravel. Additionally, exposed limestone hardbottoms supporting living benthic communities were found as well. This modern shelf sedimentary environment is situated on a large, buried shelf valley, which extends eastward beneath the modern Tampa Bay estuary. These observations plus the absence of an incised shelf valley having surficial bathymetric expression, and the absence of sand bodies normally associated with back-tracking estuarine systems indicate that there was no cross-shelf estuarine retreat path formed during the last rise in sea level. Instead, the modern Tampa Bay formed within a mid-platform, low-relief depression, which was flooded by rising marine waters late in the Holocene. With continued sea-level rise in the late Holocene, this early embayment was translated eastward or landward to its present position, whereby a larger ebb-tidal delta prograded out onto the inner shelf. Extensive linear sand ridges, common to the inner shelves to the north and south, did not form in this shelf province because it was a low-energy, open embayment lacking the wave climate and nearshore zone necessary to create such sand bodies. The distribution of bedforms on the inner shelf and the absence of seaward-oriented 2D dunes on the modern ebb-tidal delta indicate that the modern estuarine system has had little effect on its adjacent inner shelf.     

Structure of the mesoscale variability of the troposphere and stratosphere found from radio refraction measurements via CHAMP satellites

Data of an experiment on radio occultation sounding of the atmosphere with the use of GPS signals were used to obtain global distributions of the variances of mesoscale variations in the refractive index in the troposphere and stratosphere. The experiment was carried out with the CHAMP satellite during the period 2001–2005. Measured vertical profiles were smoothed inside 5–10-km-thick layers centered at different altitudes in the troposphere and stratosphere with the use of second-degree polynomials. Deviations from the smoothed quantities and the corresponding variances were obtained for each profile and averaged for each month during the analyzed interval of the CHAMP experiment. Altitude-longitude-latitude inhomogeneities in the distribution of refractive index variances were analyzed. Altitude and latitude distributions of maxima and minima of refractive index variances depend on altitude and season. Turbulence and acoustic gravity waves can be the causes of small-scale and mesoscale variations in the refractive index of the troposphere and stratosphere. The variances of variations in the refractive index are greater in the regions of tropospheric jet streams and in the zones of near-equatorial deep convection. Atmospheric disturbances increase over mountain systems.     

Th sorption and export models in the water column: A review

Over the past few decades, the radioisotope pair of ²³⁸U / ²³⁴Th has been widely and increasingly used to describe particle dynamics and particle export fluxes in a variety of aquatic systems. The present paper is one of five review articles dedicated to ²³⁴Th. It is focused on the models associated with ²³⁴Th whereas the companion papers (same issue) are focused on present and future methodologies and techniques (Rutgers van der Loeff et al.), C / ²³⁴Th ratios (Buesseler et al.), ²³⁴Th speciation (Santschi et al.) and present and future applications of ²³⁴Th [Waples, J.T., Benitez-Nelson, C.R., Savoye, N., Rutgers van der Loeff, M., Baskaran, M., Gustafsson, Ö., this issue. An Introduction to the application and future use of ²³⁴Th in aquatic systems. Marine Chemistry, FATE special issue]. In this paper, we review current ²³⁴Th scavenging models and discuss the relative importance of the non-steady state and physical terms associated with the most commonly used model to estimate ²³⁴Th flux. Based on this discussion we recommend that for future work the use of models should be accompanied by a discussion of the effect that model and data uncertainty have on the model results. We also suggest that future field work incorporate repeat occupations of sample sites on time scales of 1–4 weeks in order to evaluate steady state versus non-steady state estimates of ²³⁴Th export, especially during high flux events (> ca. 800 dpm m^− 2 d^− 1). Finally, knowledge of the physical oceanography of the study area is essential, particularly in ocean margins and in areas of established upwelling (e.g., Equatorial Pacific). These suggestions will greatly enhance the application of ²³⁴Th as a tracer of particle dynamics and flux in more complicated regimes.     

Nutrient budgets and trophic state in a hypersaline coastal lagoon: Lagoa de Araruama, Brazil

Lagoa de Araruama in the state of Rio de Janeiro, Brazil, is a hypersaline lagoon with salinity varying spatially from 45 to 56. We collected water samples during monthly cruises throughout the lagoon, and along the streams feeding the system, from April 1991 to March 1992. Nutrients and other water quality parameters exhibited great spatial and temporal variations. Mass balance calculations indicate large amounts of anthropogenic nutrient inputs. The data indicate that the lagoon currently is oligotrophic but is in a state of transition to become a mesotrophic system. Molar dissolved inorganic nitrogen:dissolved inorganic phosphorus (DIN/DIP) varied between 2.2:1 and 659:1 with a volume-weighted average of 22:1. The high DIN/DIP ratio contrasts with that found in nearby lagoons, suggesting that phytoplankton primary production is limited by phosphorus in Lagoa de Araruama. The major loss of DIP is apparently driven by biological assimilation and diagenic reactions in the sediments. Calculations indicate that the lagoon is slightly net autotrophic at +0.9 mol C m⁻² yr⁻¹. This suggests that the biomass of the primary producers is restricted by phosphorus availability. Phosphorus retention in the sediment and the hypersaline state of the lagoon prevent changes in autotrophic communities and the formation of eutrophic conditions.     

Correlative changes in metabolism and DNA damage in turbot (Scophthalmus maximus) exposed to benzo[a]pyrene

Juvenile turbot (Scophthalmus maximus) were injected intraperitoneally with either corn oil or 5 mg/kg benzo[a]pyrene (BaP) dissolved in corn oil and sampled I and 3 days after injection. After 1 day, no elevation of 7-ethoxyresorufin O-deethylase (EROD) activity was observed, however bile metabolites (BaP-7,8 dihydrodiol representing 70% of the total metabolites) and a single hepatic DNA adduct spot (0.47 adducts/10(8) nucleotides) identified by 32P-postlabelling were formed. No BaP metabolites or DNA adducts were observed in either control or carrier control fish. Fish sampled after 3 days reported 5-fold higher (P < 0.05) levels of EROD activity, a shift in the bile metabolite profile towards BaP phenol formation (1OH and 30H BaP comprising up to 60% of total metabolites detected) and the formation of two adduct spots (0.86 and 0.71 adducts/10(8) nucleotides). These results show that BaP can be metabolised and form hydrophobic DNA adducts in turbot without EROD elevation. Following EROD elevation, a shift in the profile of both BaP metabolites and BaP metabolite-DNA interactions occurs indicative of other oxidative processes.