Partial Pressure of Carbon Dioxide in Coral Reef Lagoon Waters: Comparative Study of Atolls and Barrier Reefs in the Indo-Pacific Oceans

Factors controlling the CO₂ system parameters, including the partial pressure of CO₂ (PCO₂) in coral reef waters, were investigated in three mid-oceanic reefs of the Indo-Pacific region. Surface water PCO₂ in the lagoons of Majuro Atoll and Palau barrier reef in the Pacific were 25 µatm and 48 µatm higher than those of the offshore waters, respectively, while South Male Atoll lagoon of the Maldives in the Indian Ocean exhibited relatively small difference in PCO₂ compared to the offshore water. Observations from Majuro Atoll and Palau barrier reef are consistent with the view that calcium carbonate production predominates in coral reefs. On the other hand, results from South Male Atoll can be attributed to the thorough flushing of the lagoon, which is connected to the open ocean by numerous deep channels. The offshore-lagoon PCO₂ difference depends on system-level net organic-to-inorganic carbon production ratio while reef topography, especially residence time of the lagoon, has a secondary effect on the magnitude of the offshore-lagoon difference. A potential for releasing CO₂ might be more evident in an enclosed atoll where the reef water has a longer residence time. Oceanic atoll and barrier reef lagoons, which are in the terminal stage of evolutionary history of oceanic volcanic islands, have the potential to release CO₂ to the atmosphere.     

Shuffled-cards structure and different P/T conditions in the Sanbagawa metamorphic belt, Sakuma-Tenryu area, central Japan

The Sanbagawa metamorphic terrain of the study area is divided into two units, the Shirakura and Sejiri units. The metamorphic thermal structure is interpreted on the basis of the degree of graphitization (GD) of carbonaceous material in pelitic schists. The areal variations of the metamorphic grade are presented by the distribution of GD calculated using the Lc and d₀₀₂ of carbonaceous material. As a result, the two units are classified into four metamorphic zones, respectively: A₁, A₂, B₁ and B₂ for the Shirakura Unit; and I₁, I₂, II₁ and II₂ for the Sejiri Unit. The metamorphic grades of A₁, A₂, I₁ and I₂ are included in the chlorite zone, and that of B₁, B₂, II₁ and II₂ in the garnet zone of the Sanbagawa metamorphism. The degree of graphitization at the boundary between A₂ and B₁ zones is the same as that between I₂ and II₁ zones. Detailed study on the variation of GD suggests that the present‐day structure of the study area is best interpreted as a model of shuffled‐cards structure. An estimated minimum thickness of a stack of continuous cards is about 25 m. The compositions of garnet in pelitic schists and of amphibole in basic schists are different from those in the identical metamorphic range of the Shirakura and Sejiri units. It is suggested that rocks of the Shirakura Unit were metamorphosed under higher P/T conditions than those of the Sejiri Unit.     

Enrichment of alkanes within a phytoplankton bloom during an in situ iron enrichment experiment in the western subarctic Pacific

During the Subarctic Pacific Iron Experiment for Ecosystem Dynamics Study ΙΙ (SEEDS-II), we monitored variations in the concentrations of non-methane hydrocarbons (NMHCs), CH₃Cl, N₂O, and CH₄ within a phytoplankton bloom. Stable isotopic compositions were also determined to evaluate the sources of the variations. Although there was little variation in either the concentrations or the stable isotopic compositions of alkenes, CH₃Cl, N₂O, and CH₄ during the 23-day observation period, alkane concentrations increased substantially as the phytoplankton bloomed. The column-integrated quantities of alkanes increased to 3 times pre-bloom levels for C₂H₆, 5 times for C₃H₈, and 20 times for n-C₄H₁₀. The δ¹³C values of both C₂H₆ and C₃H₈ remained almost constant while concentrations increased, whereas that of n-C₄H₁₀ increased by about 12‰. To evaluate the sources of the alkanes produced during the bloom, we compared their δ¹³C values with those of alkanes produced in axenic phytoplankton cultures in our laboratory. We concluded that during the SEEDS-ΙΙ experiment the major portions of C₂H₆ and C₃H₈ were produced during the autolysis of diatoms cells, whereas n-C₄H₁₀ was produced during autolysis of other phytoplankton cells such as cryptophytes and dinoflagellates.     

Seasonal change of oceanographic conditions and chlorophyll <Emphasis Type="Italic">a</Emphasis> vertical distribution in the southwestern Okhotsk Sea during the non-iced season

Seasonal changes in oceanographic conditions related to primary productivity was investigated in the southwestern Okhotsk Sea during non-iced seasons, using the observation data conducted in 2000∼2006. Based on hydrographic characteristics, the studied area could be classified into two regions, the Coastal Region which is influenced under the Soya Warm Current and the Forerunner Water of the Soya Warm Current, and the Offshore Region where the Intermediate Cold Water was located in the subsurface layer. This study is the first report on seasonal change of nutrient and chlorophyll a concentrations in the offshore region of the southwestern Okhotsk Sea. Variability of concentrations of chlorophyll a and nutrients is temporally and regionally high in the Coastal Region. The maximum chlorophyll a concentration in April was observed at the surface layer of both regions. The most remarkable feature on the vertical structure in the Offshore Region was the consistent existence of the Intermediate Cold Water and the development of seasonal thermocline in the subsurface layer during summer and autumn. The stratification formed within the euphotic zone in the Offshore Region resulted in the formation of the subsurface chlorophyll a maximum (SCM) from May to October. Throughout the research period, although less amplitude of nutrients at the surface was observed in the Coastal Region than that in the Offshore Region, comparable amplitude of chlorophyll a concentration was observed between regions. These results suggested differences of environmental conditions for primary production between the two regions. Depending on the presence of SCM, relationships between chlorophyll a concentration at the sea surface and chlorophyll a standing stock within the euphotic layer were different. At most stations with SCM, the surface chlorophyll a concentration was lower than 0.6 mg m-3. This suggests that the presence of SCM and the chlorophyll a standing stock within the euphotic layer may be estimated using the surface chlorophyll a concentration from spring to autumn in the studied area.     

Petrogenesis of Cretaceous Peraluminous Granite Suites with Low Initial Sr Isotopic Ratios, Kyushu Island, Southwest Japan Arc

Cretaceous granitic rocks are widely distributed in the northern to central parts of Kyushu Island, southwest Japan arc, and are divided into two types, granite and tonalite-granodiorite. These rocks are clearly defined by their mineral assemblage, that is, the granite contains mostly muscovite and/or garnet and does not have hornblende, whereas the tonalite-granodiorite is always observed with hornblende. Many workers suggest that most of the granite has low initial Sr isotopic ratios (SrI_{90 Ma}: 0.7052-0.7059) whose values are similar to those of tonalite-granodiorite (SrI_{90 Ma}: 0.7050-0.7056).

The SiO₂ contents of the granite (67.9 to 78.0 wt.%) are higher than that of tonalite-granodiorite (54.2 to 68.2 wt.%). The granite is characterized by peraluminous compositions, while the tonalite-granodiorite shows metaluminous to peraluminous compositions. The petrogenetic relation between granite and tonalite-granodiorite is examined by a modal batch melting model, which referred to results of already published experiments. The result of the model suggests that the petrogenesis of the peraluminous granitic magma can be explained by an anatexis of metaluminous tonalite in the tonalite-granodiorite under lower to middle crustal conditions and variable fH₂O.

Rocks of tonalite to granodiorite in a subduction system generally have low initial Sr isotopic ratios (<0.705), which imply that the magma derived from a highly metaluminous origin such as mafic magma, mafic lower crust and/or subducting slab. In this study, it is regarded that the peraluminous granitic magma can be directly produced by an anatexis of metaluminous tonalite. Therefore, peraluminous granite with low initial Sr isotopic ratios may imply to a first step of recycling of the granitic layer in an active plate margin.     

A Numerical Study of Turbulence Statistics and the Structure of a Spatially-Developing Boundary Layer Over a Realistic Urban Geometry

Sonic anemometer measurements are analyzed from two primary field programs and 12 supplementary sites to examine the behaviour of the turbulent heat flux near the surface with high wind speeds in the nocturnal boundary layer. On average, large downward heat flux is found for high wind speeds for most of the sites where some stratification is maintained in spite of relatively intense vertical mixing. The stratification for high wind speeds is found to be dependent on wind direction, suggesting the importance of warm-air advection, even for locally homogenous sites. Warm-air advection is also inferred from a large imbalance of the heat budget of the air for strong winds. Shortcomings of our study are noted.     

Particle Image Velocimetry Measurements of Turbulent Flow Within Outdoor and Indoor Urban Scale Models and Flushing Motions in Urban Canopy Layers

We investigate the spatial characteristics of urban-like canopy flow by applying particle image velocimetry (PIV) to atmospheric turbulence. The study site was a Comprehensive Outdoor Scale MOdel (COSMO) experiment for urban climate in Japan. The PIV system captured the two-dimensional flow field within the canopy layer continuously for an hour with a sampling frequency of 30 Hz, thereby providing reliable outdoor turbulence statistics. PIV measurements in a wind-tunnel facility using similar roughness geometry, but with a lower sampling frequency of 4 Hz, were also done for comparison. The turbulent momentum flux from COSMO, and the wind tunnel showed similar values and distributions when scaled using friction velocity. Some different characteristics between outdoor and indoor flow fields were mainly caused by the larger fluctuations in wind direction for the atmospheric turbulence. The focus of the analysis is on a variety of instantaneous turbulent flow structures. One remarkable flow structure is termed ‘flushing’, that is, a large-scale upward motion prevailing across the whole vertical cross-section of a building gap. This is observed intermittently, whereby tracer particles are flushed vertically out from the canopy layer. Flushing phenomena are also observed in the wind tunnel where there is neither thermal stratification nor outer-layer turbulence. It is suggested that flushing phenomena are correlated with the passing of large-scale low-momentum regions above the canopy.     

Solute transfer during consolidation based on a solid‐fluid‐solute coupling model

The migration of contaminant through soil is usually modeled using the advection‐dispersion equation and assumes that the porous media is stationary without introducing a constitutive equation to represent soil structure. Consequently, time‐dependent deformation induced by soil consolidation or physical remediation is not considered, despite the need to consider these variables during planning for the remediation of contaminated ground, the prediction of contaminated groundwater movement, and the design of engineered landfills. This study focuses on the numerical modeling of solute transfer during consolidation as a first step to resolve some of these issues. We combine a coupling theory‐based mass conservation law for soil‐fluid‐solute phases with finite element modeling to simulate solute transfer during deformation and groundwater convection. We also assessed the sensitivity of solute transfer to the initial boundary conditions. The modeling shows the migration of solute toward the ground surface as a result of ground settlement and the dissipation of excess pore water pressure. The form of solute transport is dependent on the ground conditions, including factors such as the loading schedule, contamination depth, and water content. The results indicate that an understanding of the interaction between coupling phases is essential in predicting solute transfer in ground deformation and could provide an appropriate approach to ground management for soil remediation.     

Post‐Eocene intensification of deep‐water circulation in the central South Pacific: Micropalaeontological clues from dredged sites along the eastern Manihiki Plateau margin

Reconstruction of early Cenozoic deep‐water circulation is one of the keys to modelling Earth's greenhouse‐to‐icehouse surface evolution, but it has long been hampered by the paucity of information from the central South Pacific. To help overcome this knowledge gap, we present new micropalaeontological data from dredged carbonates (R/V Sonne Expedition SO193) at several eastern volcanic salients of the Manihiki Plateau. Interestingly, despite appreciable longitudinal separations among the dredged sites, ages indicated by the foraminiferal assemblages are consistently around the Middle Eocene (including mixed Turonian [Late Cretaceous]/Eocene at a single site), suggesting widespread post‐Eocene cessation of the pelagic sedimentation. By integrating with independent seismic and chronostratigraphic data (Deep Sea Drilling Project Leg 33) for large‐scale erosion of top‐Eocene–Oligocene sedimentary units on the eastern Manihiki Plateau, our results can be viewed as novel physical evidence for the intensification of central South Pacific deep‐water circulation since the Eocene/Oligocene climatic transition.     

Acute toxicity of temporally varying seawater CO2 conditions on juveniles of Japanese sillago (Sillago japonica)

CO(2) ocean storage by which liquefied CO(2) is injected into the deep-sea to mitigate the climate change would increase the CO(2) concentrations of the surrounding seawater. The biological impacts of such dynamic CO(2) environments are, however, unknown. We examined the acute toxicity of temporally changing seawater CO(2) concentrations on juveniles of Sillago japonica. Step-wise increases in ambient CO(2) to fCO(2) (fractional CO(2) concentration of the gas mixture bubbled into seawater) levels of 7% and 9% resulted in mortalities of 0.15 and 0.40-0.67 after 18 h, respectively. In contrast, one-step increases to these CO(2) levels killed all fish within 15 min. Further, a sudden drop of fCO(2) from 9-10% CO(2) to normocapnia (0.038%) killed all the surviving fish within a few minutes. These results demonstrate that impacts of ocean CO(2) storage need to be examined under conditions mimicking the dynamic changes in CO(2) levels expected to occur by the CO(2) injection procedure.