The origin of the Woyla Terranes in Sumatra and the Late Mesozoic evolution of the Sundaland margin

The Jurassic–Cretaceous Woyla Group of northern Sumatra includes fragments of volcanic arcs and an imbricated oceanic assemblage. The arc rocks are intruded by a granitic batholith and are separated from the original continental margin of Sundaland by the oceanic assemblage. Rocks of the arc assemblage are considered to be underlain by a continental basement because of the occurrence of the intrusive granite and of tin anomalies identified in stream sediments. Quartzose sediments associated with the granite have been correlated with units in the Palaeozoic basement of Sumatra. From these relationships a model has been proposed in which a continental sliver was separated from the margin of Sundaland in the Late Jurassic to Early Cretaceous in an extensional strike-slip faulting regime, producing a short-lived marginal basin. The separated continental fragments have been designated the Sikuleh and Natal microcontinents. In the mid-Cretaceous the extensional regime was succeeded by compression, crushing the continental fragments back against the Sundaland margin, with the destruction of the marginal basin, now represented only by the imbricated oceanic assemblage. Modifications of this scenario are required by subsequent studies. Age-dating of the volcanic assemblage and intrusive granites in the Natal area showed that they formed part of an Eocene–Oligocene volcanic arc and are not relevant to the model. Thick-bedded radiolarian chert and palaeontological studies in the oceanic Woyla Group rocks of the Natal and Padang areas showed that they formed part of a more extensive and long-lived ocean basin which lasted from at least Triassic until mid-Cretaceous. This raised the possibility that the Sikuleh microcontinent might be allochthonous to Sumatra and encouraged plate tectonic reconstructions in which the Sikuleh microcontinent originated on the northern margin of Gondwanaland and migrated northwards across Tethys before colliding with Sundaland. Since these models were proposed, the whole of Sumatra has been mapped and units correlated with the Woyla Group have been recognised throughout western Sumatra. These units are reviewed and the validity of their correlation with the Woyla Group of northern Sumatra is assessed. From this review a revised synthesis for the Late Mesozoic tectonic evolution of the southwestern margin of Sundaland is proposed.     

Late quaternary paleoclimatic reconstructions for interior Alaska based on paleolake-level data and hydrologic models

Hydrologic models are developed for two lakes in interior Alaska to determine quantitative estimates of precipitation over the past 12,500 yrs. Lake levels were reconstructed from core transects for these basins, which probably formed prior to the late Wisconsin. Lake sediment cores indicate that these lakes were shallow prior to 12,500 yr B.P. and increased in level with some fluctuation until they reached their modern levels 4,000-8,000 yr B.P. Evaporation (E), evapotranspiration (ET), and precipitation (P) were adjusted in a water-balance model to determine solutions that would maintain the lakes at reconstructed levels at key times in the past (12,500, 9,000 and 6,000 yr B.P.). Similar paleoclimatic solutions can be obtained for both basins for these times. Results indicate that P was 35-75% less than modern at 12,500 yr B.P., 25-45% less than modern at 9,000 yr B.P. and 10-20% less than modern at 6,000 yr B.P. Estimates for E and ET in the past were based on modern studies of vegetation types indicated by fossil pollen assemblages. Although interior Alaska is predominantly forested at the present, pollen analyses indicate tundra vegetation prior to about 12,000 yr B.P. The lakes show differing sensitivities to changing hydrologic parameters; sensitivity depends on the ratio of lake area (AL) to drainage basin (DA) size. This ratio also changed over time as lake level and lake area increased. Smaller AL to DA ratios make a lake more sensitive to ET, if all other factors are constant.     

Consequences of change and variability in sea ice on marine ecosystem and biogeochemical processes during the 2007–2008 Canadian International Polar Year program

Change and variability in the timing and magnitude of sea ice geophysical and thermodynamic state have consequences on many aspects of the arctic marine system. The changes in both the geophysical and thermodynamic state, and in particular the timing of the development of these states, have consequences throughout the marine system. In this paper we review the ??consequences?? of change in sea ice state on primary productivity, marine mammal habitats, and sea ice as a medium for storage and transport of contaminants and carbon exchange across the ocean-sea-ice-atmosphere interface based upon results from the International Polar Year. Pertinent results include: 1) conditions along ice edges can bring deep nutrient-rich ??pacific?? waters into nutrient-poor surface waters along the arctic coast, affecting local food webs; 2) both sea ice thermodynamic and dynamic processes ultimately affect ringed seal/polar bear habitats by controlling the timing, location and amount of surface deformation required for ringed seal and polar bear preferred habitat 3) the ice edges bordering open waters of flaw leads are areas of high biological production and are observed to be important beluga habitat. 4) exchange of climate-active gases, including CO₂, is extremely active in sea ice environments, and the overall question of whether the Arctic Ocean is (or will be) a source or sink for CO₂ will be dependent on the balance of competing climate-change feedbacks.     

A simple parameterization of sub-grid scale open water for climate models

The effects of small fractions ( < 30%) of open water covering a grid element are currently neglected even in atmospheric general circulation models (AGCMs) which incorporate complex land surface parameterization schemes. Here, a method for simulating sub-grid scale open water is proposed which permits any existing land surface model to be modified to account for open water. This new parameterization is tested as an addition to an advanced land surface scheme and, as expected, is shown to produce general increases in the surface latent heat flux at the expense of the surface sensible heat flux. Small changes in temperature are associated with this change in the partitioning of available energy which is driven by an increase in the wetness of the grid element. The sensitivity of the land surface to increasing amounts of open water is dependent upon the type of vegetation represented. Dense vegetation (with a high leaf area index) is shown to complicate the apparently simple model sensitivity and indicates that more advanced methods of incorporating open water into AGCMs need to be considered and compared against the parameterization suggested here. However, the sensitivity of one land surface model to incorporating open water is large enough to warrant consideration of its incorporation into climate models.     

Re-evaluation of the Cablac Limestone at its type area, East Timor: Revision of the Miocene stratigraphy of Timor

The Cablac Limestone, widely recorded in Timor, has its type area on Cablac Mountain where it was regarded as a Lower Miocene shallow-marine carbonate-platform succession. The Bahaman-like facies placed in the Cablac Limestone are now known to belong to the Upper Triassic–Lower Jurassic rather than the Lower Miocene. On the northern slopes of Cablac Mountain, a crush breccia, formerly regarded as the basal conglomerate of the formation, is now considered to have developed along a high-angle fault separating Banda Terrane units of Asian affinity from an overthrust limestone stack containing units belonging to the Gondwana and Australian-Margin Megasequences. The Cablac breccia includes rock fragments that were probably derived locally from these tectonostratigraphic units after terrane emplacement and overthrusting. Clasts include peloid and oolitic limestones of the Upper Triassic–Lower Jurassic derived from the Gondwana Megasequence, deep-water carbonate pelagites of the Cretaceous and Paleogene derived from the Australian-Margin Megasequence, Upper Oligocene–Lower Miocene (Te Letter Stage) shallow-water limestone derived from the Banda Terrane, and a younger Neogene calcarenite containing clasts of mixed tectonostratigraphic affinity. There is no evidence for significant sedimentary or tectonic transport of clasts that form the breccia. The clast types and the present understanding of the geological history of Timor suggest that the crush breccia formed late in the Plio-Pleistocene uplift history of Timor. It is not the basal conglomerate of the Cablac Limestone. However, the clasts of an Upper Oligocene–Lower Miocene limestone found in the breccia suggest that a shallow-marine limestone unit of this age either outcrops in the region and has not been detected in the field, or has been eroded completely during late Neogene uplift. The clasts are similar in age and lithology to an Upper Oligocene–Lower Miocene formation that unconformably overlies a metamorphic complex in the Booi region of West Timor, similar to the Lolotoi Metamorphic Complex (Banda Terrane) that is juxtaposed against the crush breccia of Cablac Mountain. The Cablac Limestone at its type area includes a mixed assemblage of carbonate rock units ranging in age from Triassic to Plio-Pleistocene and representing diverse facies. As a formation, the name “Cablac Limestone” should be discarded for a Cenozoic unit. The Upper Oligocene–Lower Miocene shallow-water limestone unit that is typified by outcrops in the Booi region of West Timor, and that has contributed to clasts in the Cablac breccia, is informally named the Booi limestone. It is considered part of the allochthonous Banda Terrane of Asian affinity and represents the only shallow-marine Lower Miocene unit known from Timor. The only other Miocene sedimentary unit known from Timor includes carbonate pelagites – designated the Kolbano beds – probably deposited on an Australian continental terrace at water depths between 1000 and 3000 m. On the northeastern edge of Cablac Mountain, oolitic limestone and associated units of the Gondwana Megasequence, the Kolbano beds of the Australian-Margin Megasequence, and the Booi limestone and associated metasediments of the Banda Terrane were juxtaposed by a Plio-Pleistocene high-angle fault along which the Cablac crush breccia formed.     

Riverine dominance of a nearshore marine demersal food web: evidence from stable isotope and C/N ratio analysis

The Thukela Bank, KwaZulu-Natal, supports a diverse ecosystem and South Africa’s only prawn fishery. Oceanographic studies suggest riverine input is not important for the biology of this system, whereas biological studies suggest the contrary, with prawn catches increasing with increased fluvial run-off. The aim of this study was to determine (i) the importance of riverine and marine organic matter for the Thukela Bank food web; and (ii) whether there are seasonal changes in the Thukela River stable isotope values, and, if so, whether these are reflected in the isotope values of demersal organisms. Estuarine organic matter, sediments and demersal organisms were collected from several sites across the bank in the wet and dry seasons of 2008, 2009 and 2010. Marine particulate organic matter was also collected in 2010 and analysed for δ13C and δ15N, as well as C/N ratios. There were strong seasonal changes in isotopic values of organic matter and fauna, especially faunal δ13C. There was an apparent time-lag in organisms assimilating riverine organic matter isotopic values, with the isotopic signature of demersal organisms reflecting that of riverine organic matter from the previous season, which is likely the result of tissue turnover time. In 2010, Thukela Bank sediment organic matter was of riverine origin and this maintained the demersal food web. We conclude that Thukela River organic matter is an important input to the food web of the Thukela Bank, indicating that any future damming of the catchment area could have serious consequences for this ecosystem.     

Static Stability of the Troposphere Over the Southeastern Beaufort Sea–Amundsen Gulf Region of the Western Maritime Arctic

The characterization of the static stability of the troposphere over the western maritime Arctic remains limited in spite of its significance to both atmospheric thermodynamics and dynamics. Field observations of microwave radiometric temperature profiles from the International Polar Year, Circumpolar Flaw Lead System Study (late November 2007 to mid-July 2008) and the ArcticNet field campaign (mid-July to early November 2009) provided a unique opportunity to characterize the static stability of the troposphere over the southeastern Beaufort Sea–Amundsen Gulf region. Notably, the monthly median atmospheric boundary layer (<2000?m) static stability profile for April and the profile for May clearly revealed an inversion elevated above a thermal internal boundary layer, whereas the median summer static stability profiles had very strong surface-based inversions. These profiles have been linked to the seasonal evolution of sea-ice cover in Amundsen Gulf. The monthly static stability profiles for the free atmosphere (2000–10,000?m) revealed an annual cycle. The average static stability of the lower troposphere (2000–5000?m) had a minimum of 3.3?±?0.5?K?km^?1 in July and a maximum of 4.5?±?0.5?K?km^?1 in January and February. In the upper troposphere (>5000–8000?m), the average static stability had a minimum of 2.9?±?0.6?K?km^?1 in June and August and a maximum of 5.3?±?0.8?K?km^?1 in January. The monthly median heights of the tropopause also had an annual cycle. The maximum of 9750?m occurred in June, July, and August. The minimum tropopause height of 8000?m occurred in December, January, and March. The seasonal cycles of static stability in the free atmosphere and the seasonal cycle in the height of the tropopause can be attributed to regional as well as synoptic-scale forcing. This analysis will contribute to the understanding of the thermodynamics and dynamics of a data-sparse region of the Arctic by providing a “snapshot” of the state of the atmosphere through a composite annual cycle.     

Carbon and nitrogen primary productivity in three North Carolina estuaries

Uptake of inorganic carbon and ammonium by the plankton community of three North Carolina estuaries was measured using ¹⁴C and ¹⁵N isotope methods. At 0% light, C appeared to be lost via respiration, and at increasing light levels uptake of inorganic carbon increased linearly, saturated (mean I_k = 358±30 μEin m⁻² s⁻¹), and frequently showed inhibition at the highest light intensities. At 0% light NH₄⁺ uptake was significantly greater than zero and was frequently equivalent to uptake in the light (light independent); at increasing light levels NH₄⁺ uptake saturated (mean I_k = 172±44 μEin m⁻² s⁻¹) and frequently indicated strong inhibition. Light-saturated uptake rates of inorganic carbon and NH₄⁺ were a function of chlorophyll a (r² = 0·7−0·9); average assimilation numbers were 625 nmol CO₂ (μg chl. a)⁻¹ h⁻¹ and 12·9 nmol NH₄⁺ (μg chl. a)⁻¹ h⁻¹ and were positively correlated with temperature (r² = 0·3−0·7). The ratio of dark to light-saturated NH₄⁺ uptake tended to be near 1·0 for large algal populations at low NH₄⁺ concentrations, indicating near light independence of uptake; whereas the ratio was lower for the opposite conditions. These data are interpreted as indicative of nitrogen stress, and it is suggested that uptake of NH₄⁺ deep in the euphotic zone and at night are mechanisms for balancing the C:N of cellular pools. A 24-h study using summed short-term incubations confirmed this; the cumulative C:N of CO₂ and NH₄⁺ uptake during the daylight period was 10–20, whereas over the 24-h period the ratio was 6 due to dark NH₄⁺ uptake. Annual carbon and nitrogen primary productivity were respectively estimated as 24 and 4·0 mol m⁻² year⁻¹ for the South River estuary, 42 and 7·3 mol m⁻² year⁻¹ for the Neuse River estuary, and 9·6 and 1·6 mol m⁻² year⁻¹ for the Newport River estuary.     

GSTA is a major glutathione S-transferase gene responsible for 4-hydroxynonenal conjugation in largemouth bass liver

We have previously shown that largemouth bass (Micropterus salmoides) has a remarkable ability to conjugate 4-hydroxy-2-nonenal (4HNE), a mutagenic and cytotoxic alpha,beta-unsaturated aldehyde produced during the peroxidation of lipids. In addition, we have isolated a glutathione S-transferase cDNA (bass GSTA) that encodes a recombinant protein which is highly active in 4HNE conjugation and structurally similar to plaice (Pleuronectes platessa) GSTA. In the present study, HPLC-GST subunit analysis revealed the presence of at least two major GST isoforms in bass liver, with one peak constituting 80% of the total bass liver GST protein. Liquid chromatography mass spectrometry (LC-MS) and electrospray ionization analysis of the major bass GST subunit yielded a molecular weight of 26,396 kDa. Endo-proteinase Lys-C digestion and Edman degradation protein sequencing of this GST peak demonstrated that this protein was encoded by bass GSTA. Analysis of genomic DNA fragments isolated by nested PCR indicated the presence of a GST gene cluster in bass liver that contained GSTA, and was similar to a GST gene cluster characterized by Leaver et al., in plaice. Collectively, our data indicates the presence of a major GST in bass liver involved in the protection against oxidative stress. This GST is part of a gene cluster that may be conserved in certain freshwater and marine fish.