The role of biomorphodynamics in estuarine evolution in New Zealand

Abstract:   Biomorphodynamic interactions, the feedback loops that operate between physical processes, biology and morphology, affect the long-term evolution of estuaries. This paper outlines how consideration of such interactions and implementation through innovative modelling techniques can become the next crucial step needed to advance understanding of estuarine evolution.     

The SCUBA HAlf Degree Extragalactic Survey – VI. 350-μm mapping of submillimetre galaxies

A follow-up survey using the Submillimetre High-Angular Resolution Camera (SHARC-II) at 350 μm has been carried out to map the regions around several 850-μm-selected sources from the Submillimetre HAlf Degree Extragalactic Survey (SHADES). These observations probe the infrared (IR) luminosities and hence star formation rates in the largest existing, most robust sample of submillimetre galaxies (SMGs). We measure 350-μm flux densities for 24 850-μm sources, seven of which are detected at ≥2.5σ within a 10 arcsec search radius of the 850-μm positions. When results from the literature are included the total number of 350-μm flux density constraints of SHADES SMGs is 31, with 15 detections. We fit a modified blackbody to the far-IR (FIR) photometry of each SMG, and confirm that typical SMGs are dust-rich  ( M _dust≃ 9 × 10⁸ M_⊙)  , luminous  ( L _FIR≃ 2 × 10¹² L_⊙)  star-forming galaxies with intrinsic dust temperatures of ≃35 K and star formation rates of  ≃400 M_⊙ yr⁻¹  . We have measured the temperature distribution of SMGs and find that the underlying distribution is slightly broader than implied by the error bars, and that most SMGs are at 28 K with a few hotter. We also place new constraints on the 350-μm source counts, N ₃₅₀(>25 mJy) ∼ 200–500 deg⁻².     

The effect of peat structure on the spatial distribution of biogenic gases within bogs

Northern peatlands are a large source of atmospheric methane (CH₄) and both a source and a sink of atmospheric carbon dioxide (CO₂). The rate and temporal variability in gas exchanges with peat soils is directly related to the spatial distribution of these free‐phase gases within the peat column. In this paper, we present results from surface and borehole ground‐penetrating radar surveys – constrained with direct soil and gas sampling – that compare the spatial distribution of gas accumulations in two raised bogs: one in Wales (UK), the other in Maine (USA). Although the two peatlands have similar average thickness, physical properties of the peat matrix differ, particularly in terms of peat type and degree of humification. We hypothesize that these variations in physical properties are responsible for the differences in gas distribution between the two peatlands characterized by (1) gas content up to 10.8% associated with woody peat and presence of wood layers in Caribou Bog (Maine) and (2) a more homogenous distribution with gas content up to 5.7% at the surface (i.e. <0.5 m deep) in Cors Fochno (Wales). Our results highlight the variability in biogenic gas accumulation and distribution across peatlands and suggest that the nature of the peat matrix has a key role in defining how biogenic gas accumulates within and is released to the atmosphere from peat soils. © 2015 The Authors. Hydrological Processes published by John Wiley & Sons Ltd.     

GLUE: 20 years on

This paper reviews the use of the Generalized Likelihood Uncertainty Estimation (GLUE) methodology in the 20 years since the paper by Beven and Binley in Hydrological Processes in (1992), which is now one of the most highly cited papers in hydrology. The original conception, the on‐going controversy it has generated, the nature of different sources of uncertainty and the meaning of the GLUE prediction uncertainty bounds are discussed. The hydrological, rather than statistical, arguments about the nature of model and data errors and uncertainties that are the basis for GLUE are emphasized. The application of the Institute of Hydrology distributed model to the Gwy catchment at Plynlimon presented in the original paper is revisited, using a larger sample of models, a wider range of likelihood evaluations and new visualization techniques. It is concluded that there are good reasons to reject this model for that data set. This is a positive result in a research environment in that it requires improved models or data to be made available. In practice, there may be ethical issues of using outputs from models for which there is evidence for model rejection in decision making. Finally, some suggestions for what is needed in the next 20 years are provided. © 2013 The Authors. Hydrological Processes published by John Wiley & Sons, Ltd.     

The geological history of insect-related plant damage

Biological damage to plants is commonly found from the Devonian but occurs most commonly from the Cretaceous. Damage inflicted on plants whilst they were alive may trigger a pathological response involving the growth of abnormal tissues. Much of the damage is caused by arthropods, particularly insects. Whilst some damage is non-taxon specific, such as simple feeding traces, other damage, such as leaf mines, galls or bark boring, may reveal the co-evolution of host specific taxa and the timing of such interactions. Damaged plants, particularly from the Cretaceous and Tertiary are described and illustrated. The geological history of the evolution of insect-related plant damage is briefly reviewed. Increased variety in the pathological response of plants is seen from the Cretaceous with the evolution of the angiosperms and diversification of numerous insect groups.     

The hydrodynamic and sedimentary setting of nearshore coral reefs, central Great Barrier Reef shelf, Australia: Paluma Shoals, a case study

The Great Barrier Reef (GBR) shelf contains a range of coral reefs on the highly turbid shallow inner shelf, where interaction occurs with terrigenous sediments. The modern hydrodynamic and sedimentation regimes at Paluma Shoals, a shore‐attached ‘turbid‐zone’ coral reef, and at Phillips Reef, a fringing reef located 20 km offshore, have been studied to document the mechanisms controlling turbidity. At each reef, waves, currents and near‐bed turbidity were measured for a period of ≈1 month. Bed sediments were sampled at 135 sites. On the inner shelf, muddy sands are widespread, with admixed terrigenous and carbonate gravel components close to the reefs and islands, except on their relatively sheltered SW side, where sandy silty clays occur. At Paluma Shoals, the coral assemblage is characteristic of inner‐shelf or sheltered habitats on the GBR shelf (dominated by Galaxea fascicularis, up to >50% coral cover) and is broadly similar to that at Phillips Reef, further offshore and in deeper water. The sediments of the Paluma Shoals reef flats consist of mixed terrigenous and calcareous gravels and sands, with intermixed silts and clays, whereas the reef slope is dominated by gravelly quartz sands. The main turbidity‐generating process is wave‐driven resuspension, and turbidity ranges up to 175 nephelometric turbidity units (NTU). In contrast, at Phillips Reef, turbidity is <15 NTU and varies little. At Paluma Shoals, turbidity of >40 NTU probably occurs for a total of >40 days each year, and relatively little time is spent at intermediate turbidities (15–50 NTU). The extended time spent at either low or high turbidities is consistent with the biological response of some species of corals to adopt two alternative mechanisms of functioning (autotrophy and heterotrophy) in response to different levels of turbidity. Sedimentation rates over periods of hours may reach the equivalent of 10 000 times the mean global background terrigenous flux (BTF) of sediment to the sea floor, i.e. 10 000 BTF, over three orders of magnitude greater than the Holocene average for Halifax Bay of <3 BTF. As elsewhere along the nearshore zone of the central GBR, dry‐season hydrodynamic conditions form a primary control upon turbidity and the distribution of bed sediments. The location of modern nearshore coral reefs is controlled by the presence of suitable substrates, which in Halifax Bay are Pleistocene and early Holocene coarse‐grained (and relatively stable) alluvial deposits.     

A comparison of cross-hole electrical and seismic data in fractured rock

Cross‐hole anisotropic electrical and seismic tomograms of fractured metamorphic rock have been obtained at a test site where extensive hydrological data were available. A strong correlation between electrical resistivity anisotropy and seismic compressional‐wave velocity anisotropy has been observed. Analysis of core samples from the site reveal that the shale‐rich rocks have fabric‐related average velocity anisotropy of between 10% and 30%. The cross‐hole seismic data are consistent with these values, indicating that observed anisotropy might be principally due to the inherent rock fabric rather than to the aligned sets of open fractures. One region with velocity anisotropy greater than 30% has been modelled as aligned open fractures within an anisotropic rock matrix and this model is consistent with available fracture density and hydraulic transmissivity data from the boreholes and the cross‐hole resistivity tomography data. However, in general the study highlights the uncertainties that can arise, due to the relative influence of rock fabric and fluid‐filled fractures, when using geophysical techniques for hydrological investigations.