The age and growth of hottentot seabream Pachymetopon blochii before and after the South African linefish state of emergency in 2000

The hottentot seabream Pachymetopon blochii is a small-sized (maximum 2.67 kg) sparid endemic to southern Africa. It is an important target in South Africa's Western Cape traditional linefishery, particularly in the absence of more valuable pelagic species (such as Thyrsites atun and Seriola lalandi). In 2000, South Africa's linefishery was declared to be in a state of emergency, and commercial fishing effort was consequently reduced by 70%. A subsequent increase in stock biomass and intraspecific competition, coupled with environmental changes, were hypothesised to have thereafter altered the growth rate of hottentot, from 2000 to 2010. This study aimed to revise outdated age–growth models for the hottentot by using modern techniques (sectioned otoliths), and to compare age–growth relationships before and after the declared linefish state of emergency. The maximum age observed was 19 years, with no difference in the growth rate between sexes (p = 0.39–0.43) or time-periods (p = 0.96). Although the growth rate did not change, there is evidence that the age structure of the stock changed between time-periods as a result of changes in fishing pressure between 2000 and 2010. The enhanced recent growth model for hottentot, described as L_t = 418.063 (1 – e^{?0.104(t – [?4.709])}) (pooled sexes; n = 206), indicates a considerably slower growth rate for this species than was proposed previously using whole otoliths and has major implications for effective stock management.     

A polarimetric spectral imager using acousto-optic tunable filters

We report laboratory and telescopic observations with a polarimetric spectral imager based on an acousto-optic tunable filter (AOTF) where we demonstrate simultaneous acquisition of orthogonally polarized images at a spectral resolving power on the order of 103 and at a Rayleigh criterion spatial resolution of 100 line pairs per mm. This matches the spatial resolution of most digital arrays. An AOTF is shown to be usable as a fast shutter with a contrast of over 10⁴ on a sub-millisecond time scale while providing an high transmittance of about 75% (both polarizations summed) when illuminated by white light. The polarization contrast between the orthogonally polarized images exceeds 10⁴ across the field of view, permitting accurate measurement of the polarization parameters of incident light. These characteristics are now being used in a program of high spatial resolution imaging in narrow spectral bands. Some peculiarities and limitations of AOTFs are indicated.This research was supported by NASA under Grant NAGW-122 and under contract with the Jet Propulsion Laboratory under NASA grant NAS 7-918.Visiting Astronomer, Mauna Kea Observatory.     

Constraining pathways of microbial mediation for carbonate concretions of the Miocene Monterey Formation using carbonate-associated sulfate

Carbonate concretions can form as a result of organic matter degradation within sediments. However, the ability to determine specific processes and timing relationships to particular concretions has remained elusive. Previously employed proxies (e.g., carbon and oxygen isotopes) cannot uniquely distinguish among diagenetic alkalinity sources generated by microbial oxidation of organic matter using oxygen, nitrate, metal oxides, and sulfate as electron acceptors, in addition to degradation by thermal decarboxylation. Here, we employ concentrations of carbonate-associated sulfate (CAS) and δ³⁴S_CAS (along with more traditional approaches) to determine the specific nature of concretion authigenesis within the Miocene Monterey Formation.Integrated geochemical analyses reveal that at least three specific organo-diagenetic reaction pathways can be tied to concretion formation and that these reactions are largely sample-site specific. One calcitic concretion from the Phosphatic Shale Member at Naples Beach yields δ³⁴S_CAS values near Miocene seawater sulfate (～+22‰ VCDT), abundant CAS (ca. 1000 ppm), depleted δ¹³C_carb (～?11‰ VPDB), and very low concentrations of Fe (ca. 700 ppm) and Mn (ca. 15 ppm)—characteristics most consistent with shallow formation in association with organic matter degradation by nitrate, iron-oxides and/or minor sulfate reduction. Cemented concretionary layers of the Phosphatic Shale Member at Shell Beach display elevated δ³⁴S_CAS (up to ～+37‰), CAS concentrations of ～600 ppm, mildly depleted δ¹³C_carb (～?6‰), moderate amounts of Mn (ca. 250 ppm), and relatively low Fe (ca. 1700 ppm), indicative of formation in sediments dominated by sulfate reduction. Finally, concretions within a siliceous host at Montaña de Oro and Naples Beach show minimal CAS concentrations, positive δ¹³C values, and the highest concentrations of Fe (ca. 11,300 ppm) and Mn (ca. 440 ppm), consistent with formation in sediments experiencing methanogenesis in a highly reducing environment. This study highlights the promise in combining CAS analysis with more traditional techniques to differentiate among diagenetic reactions as preserved in the geologic record and shows potential for unraveling subsurface biospheric processes in ancient samples with a high degree of specificity.     

Assessing trophic adaptability is critical for understanding the response of predatory fishes to climate change: a case study of Pomatomus saltatrix in a global hotspot

There is a growing need to incorporate biotic interactions, particularly those between predators and their prey, when predicting climate-driven shifts in marine fishes. Predators dependent on a narrow range of prey species should respond rapidly to shifts in the distribution of their prey, whereas those with broad trophic adaptability may respond to shifts in their prey by altering their diet. Small pelagic fishes are an extremely important component of the diet of many marine predators. However, their populations are expected to shift in distribution and fluctuate in abundance as the climate changes. We conducted a comparative study of the seasonal diet of adult Pomatomus saltatrix over two periods (June–December 2006 and 2012) and examined the available data on small pelagic fishes biomass in a global hotspot (the coastal region of southern Angola, southern Africa) to gain an understanding of the tropic adaptability of the species. Despite a drop (630 000 t to 353 000 t) in the abundance of their dominant prey (Sardinella aurita) in the region, it remained the most important prey item during both study periods (Period 1 = 99.3% RI, Period 2 = 85.3% RI, where %RI is a ranking index of relative importance). However, the diet during Period 2 was supplemented with prey typically associated with the nearshore zone. The seasonal data showed that P. saltatrix were capable not only of switching their diet from S. aurita to other prey items, but also of switching their trophic habitat from the pelagic to the nearshore zone. These findings suggest that P. saltatrix will not necessarily co-migrate if there is a climate-driven shift in the distribution of small pelagic fishes (their dominant prey). Accordingly, understanding the trophic adaptability of predators is critical for understanding their response to the impacts of climate change.     

Phylogeny of the Sepia officinalis species complex in the eastern Atlantic extends the known distribution of Sepia vermiculata across the Benguela upwelling region

Accurate species identification and biogeographic characterisation are fundamental for appropriate management of expanding cephalopod fisheries. This study addresses this topic within the common cuttlefish Sepia officinalis species complex (S. officinalis, S. hierredda and S. vermiculata), with an emphasis on occurrence in African waters. Tissue samples from the currently presumed distributions of S. vermiculata and S. hierredda (from South Africa and Ghana/Angola, respectively) were sequenced for the cytochrome c oxidase subunit I (COI) and the cytochrome b (cytb) genes of the mitochondrial genome and then compared to existing S. officinalis sequences. Three highly divergent and reciprocally monophyletic clades, corresponding to S. officinalis, S. hierredda and S. vermiculata, were resolved, representing the first molecular confirmation of the distinct species status of S. hierredda and S. vermiculata. The sequences also revealed that, contrary to expectations based on presently published information, all samples from southern Angola were S. vermiculata. These results indicate that the range of S. vermiculata extends beyond the currently described northern limit and that S. hierredda and S. vermiculata may be indiscriminately harvested in Angolan waters. Finer-scale patterns within S. vermiculata phylogeography also indicate that the Benguela Current System and/or other environmental factors serve to isolate northern and southern stocks.     

Authigenic uranium: Relationship to oxygen penetration depth and organic carbon rain

We have measured U in benthic incubation chambers, sediment pore waters, and in sediments along the California continental margin. Sedimentary U uptake rates, based on a combination of sediment pore water profiles and benthic incubation chambers, generally agree with those predicted from sediment accumulation rate data. This agreement supports the view that most of the continental margin sedimentary U is delivered by diffusion across the seawater-sediment boundary. The average rate of authigenic U accumulation for all the sites examined here is ∼−0.2 nmol cm^-2 y^-1, which is consistent with published global estimates of sedimentary U uptake. In addition, the accumulation rate of U in sediments exhibits a nonlinear relationship with the oxygen penetration depth and a linear relationship with the organic carbon rain rate. These relationships highlight the potential utility for the U accumulation rate as a proxy for these processes.     

The impact of bacterial strain on the products of dissimilatory iron reduction

Three bacterial strains from the genus Shewanella were used to examine the influence of specific bacteria on the products of dissimilatory iron reduction. Strains CN32, MR-4 and W3-18-1 were incubated with HFO (hydrous ferric oxide) as the terminal electron acceptor and lactate as the organic carbon and energy source. Mineral products of iron reduction were analyzed using X-ray powder diffraction, electron microscopy, coulometry and susceptometry. Under identical nutrient loadings, iron reduction rates for strains CN32 and W3-18-1 were similar, and about twice as fast as MR-4. Qualitative and quantitative assessment of mineralized end products (secondary minerals) indicated that different products were formed during experiments with similar reduction rates but different strains (CN32 and W3-18-1), and similar products were formed during experiments with different iron reduction rates and different strains (CN32 and MR-4). The major product of iron reduction by strains CN32 and MR-4 was magnetite, while for W3-18-1 it was a mixture of magnetite and iron carbonate hydroxide hydrate (green rust), a precursor to fougerite. Another notable difference was that strains CN32 and MR-4 converted all of the starting ferric iron material into magnetite, while W3-18-1 did not convert most of the Fe³⁺ into a recognizable crystalline material. Biofilm formation is more robust in W3-18-1 than in the other two strains used in this study. The differences in mineralization may be an indicator that EPS (or another cellular product from W3-18-1) may interfere with the crystallization of magnetite or facilitate formation of green rust. These results suggest that the relative abundance of mineral end products and the relative distribution of these products are strongly dependent on the bacterial species or strain catalyzing iron reduction.     

Search for HD in Jupiter and Saturn

Upper limits are placed on the D/H ratio in the observed portions of the atmospheres of Jupiter and Saturn from observations at high S/N over the region of the 5-0 R(1) line of HD. The upper limits of 4 × 10^?5 and 6 × 10^?5 D/H on Jupiter and Saturn, respectively, are not inconsistent with present models for abundance ratios in the primitive solar nebula or with other estimates of this quantity from observations.     

Metabolic activity throughout early development of dusky kob Argyrosomus japonicus (Sciaenidae)

The physiology of fishes in the early stages of development remains poorly assessed despite the importance of identifying energy bottlenecks in organisms faced with changing environmental conditions. This study describes the metabolic activity of dusky kob Argyrosomus japonicus throughout its early development, from hatchling to settlement stage. Standard, routine and active metabolic rates (SMR, RMR and AMR, respectively) were assessed to determine the species’ metabolic scope and identify how metabolism changes with growth and development. Distinct metabolic changes occurred in association with developmental changes during the early life stages, with flexion-stage larvae showing significantly reduced metabolic scope (approx. 0.30 µmol O₂ ind.^–1 h^–1), representing an energy bottleneck. Based on these findings, it is likely that larvae of A. japonicus are most susceptible to environmental perturbations during flexion. The variability of metabolic rates during the diel cycle was also assessed and revealed that the early-stage larvae showed no preference for daylight, although settlement-stage juveniles were more active during daylight hours (RMR = 12.78 µmol O₂ ind.^–1 h^–1) than at night (RMR = 5.87 µmol O₂ ind.^–1 h^–1). These results suggest that metabolic measurements of the SMR of A. japonicus larvae can be taken at any time of the diel cycle until the settlement phase, when readings should take place at night.     

Granulite-Facies Metamorphism, Granite Falls-Montevideo Area, Minnesota

In the Granite Falls-Montevideo area, Minnesota, granulite faciesmineral assemblages were collected from three major lithologicunits—hornblende-pyroxene gneiss, garnet-biotite gneiss,and granitic gneiss. Mineral assemblages most commonly observedare: plagioclase-hornblende-orthopyroxene-clinopyroxene-magnetite-ilmenite-(biotite-quartz);quartz-plagioclase-biotite-garnet-orthopyroxene-(orthoclase);quartz-plagioclase-biotite-garnet-(orthoclase); quartz-plagioclase-microcline-(garnet-hematite);and quartz-plagio-clase-microcline-biotite-(garnet-hematite-rutile).Partial analyses of isomorphous phases from the hornblende-pyroxenegneiss and the garnet-biotite gneiss were determined with anelectron microprobe. Negligible compositional variation within single grains andof a particular mineral within a given specimen, regular distributionof Fe and Mg between coexisting hornblende, ortho-pyroxene,and clinopyroxene, obedience of the mineral assemblages to theGibbs Phase Rule, and lack of empirically determined incompatiblephases indicate a close approach to chemical equilibrium duringmetamorphism. Plots of coexisting biotite, garnet, and orthopyroxeneon an appropriate phase diagram result in some crossing tielines which cannot be adequately explained by temperature orpressure differences, but suggest that H₂O and/or O₂ were notperfectly mobile components during metamorphism. This is alsoindicated by interlayering of hornblende assemblages with pyroxeneassemblages and by different iron oxide phases in essentiallythe same mineral assemblage. Textural and chemical relationships of retrograde metamorphicassemblages suggest that some retrograde reactions are a resultof cooling following the granulite-facies metamorphism, butthat others may have resulted from recrystallization duringa stage of thermal metamorphism that is reflected in the potassium-argonand rubidium-strontium biotite ages of the metamorphic rocks.