Energy flow and elemental concentrations in the Steina River ecosystem (Black Forest, Germany)

Considering food web energetics and elemental cycling together allows the testing of hypotheses about the coevolution of biological systems and their physical environment. We investigated the energy flow and the distribution of 25 elements in the Steina River.¶We constructed an annual energy flow network and estimated the emergy ("embodied energy" that includes all the energy involved in a process) contributions of resources sustaining the system. Furthermore, we measured the concentration of various macronutrients, essential elements, and heavy metals in the physical environment and trophic compartments. Finally, we examined the hypothesis of a positive relationship between the "rarity" of an element and its tendency to bioaccumulate. To do so, we used transformity, the relative energy input required to sustain a compartment's net production or the concentration differential of an element between the living community and the physical environment.¶The resulting energy flow network is one of the most complete available for streams. In the Steina, over 99% of the energy input is transported through the system without being processed. Dissolved inorganic matter and sunlight are the largest inputs, but uptake efficiency is much higher for dissolved and particulate organic matter. Transformities of trophic compartments and elements span 6 to 7 orders of magnitude.¶The tendency to bioaccumulate was as predicted for most elements, with macronutrients showing no accumulation and heavy elements accumulating in high-transformity compartments. However, Na and K were found at highest concentrations in consumers, and Pb, Ga, and Cd in algae. Improved estimates may become possible as more knowledge is available on ecosystem flows. We suggest further ways of testing hypotheses about strategies of element processing.     

Elimination of source-generated noise from correlated vibroseis data (the ‘ghost-sweep’ problem)

The most common noise-reduction methods employed in the vibroseis technique (e.g. spike and burst reduction, vertical stacking) are applied in the field to reduce noise at a very early stage. In addition, vibrator phase control systems prevent signal distortions produced by non-linearity of the source itself. However, the success of these automatic correction methods depends on parameter justification by the operator and the actual characteristics of the distorting noise. More specific noise-reduction methods (e.g. Combisweep (Trade mark of Geco-Prakla), elimination of harmonics) increase production costs or need uncorrelated data for the correction process. Because the field data are usually correlated and vertically stacked in the field to minimize logistical and processing costs, it is not possible to make subsequent parameter corrections to optimize the noise reduction after correlation and vertical stacking of a production record. The noise-reduction method described here uses the final recorded, correlated and stacked vibroseis field data. This method eliminates signal artifacts caused e.g. by incorrect vibroseis source signals being used in parameter estimation when a frequency–time analysis is combined with a standard convolution process. Depending on the nature of the distortions, a synthetically generated, nearly recursive noise-separation operator compresses the noise artifact in time using a trace-by-trace filter. After elimination of this compressed noise, re-application of the separation operator leads to a noise-corrected replacement of the input data. The method is applied to a synthetic data set and to a real vibroseis field record from deep seismic sounding, with good results.     

Emerging Technologies and Synergies for Airborne and Space-Based Measurements of Water Vapor Profiles

A deeper understanding of how clouds will respond to a warming climate is one of the outstanding challenges in climate science. Uncertainties in the response of clouds, and particularly shallow clouds, have been identified as the dominant source of the discrepancy in model estimates of equilibrium climate sensitivity. As the community gains a deeper understanding of the many processes involved, there is a growing appreciation of the critical role played by fluctuations in water vapor and the coupling of water vapor and atmospheric circulations. Reduction of uncertainties in cloud-climate feedbacks and convection initiation as well as improved understanding of processes governing these effects will result from profiling of water vapor in the lower troposphere with improved accuracy and vertical resolution compared to existing airborne and space-based measurements. This paper highlights new technologies and improved measurement approaches for measuring lower tropospheric water vapor and their expected added value to current observations. Those include differential absorption lidar and radar, microwave occultation between low-Earth orbiters, and hyperspectral microwave remote sensing. Each methodology is briefly explained, and measurement capabilities as well as the current technological readiness for aircraft and satellite implementation are specified. Potential synergies between the technologies are discussed, actual examples hereof are given, and future perspectives are explored. Based on technical maturity and the foreseen near-mid-term development path of the various discussed measurement approaches, we find that improved measurements of water vapor throughout the troposphere would greatly benefit from the combination of differential absorption lidar focusing on the lower troposphere with passive remote sensors constraining the upper-tropospheric humidity.     

Stabilization of extracellular polymeric substances (Bacillus subtilis) by adsorption to and coprecipitation with Al forms

Extracellular polymeric substances (EPS) are continuously produced by bacteria during their growth and metabolism. In soils, EPS are bound to cell surfaces, associated with biofilms, or released into solution where they can react with other solutes and soil particle surfaces. If such reaction results in a decrease in EPS bioaccessibility, it may contribute to stabilization of microbial-derived organic carbon (OC) in soil. Here we examined: (i) the chemical fractionation of EPS produced by a common Gram positive soil bacterial strain (Bacillus subtilis) during reaction with dissolved and colloidal Al species and (ii) the resulting stabilization against desorption and microbial decay by the respective coprecipitation (with dissolved Al) and adsorption (with Al(OH)_3(am)) processes. Coprecipitates and adsorption complexes obtained following EPS-Al reaction as a function of pH and ionic strength were characterized by Fourier transform infrared spectroscopy (FTIR) and X-ray photoelectron spectroscopy (XPS). The stability of adsorbed and coprecipitated EPS against biodegradation was assessed by mineralization experiments for 1100 h. Up to 60% of the initial 100 mg/L EPS-C was adsorbed at the highest initial molar Al:C ratio (1.86), but this still resulted only in a moderate OC mass fraction in the solid phase (17 mg/g Al(OH)_3(am)). In contrast, while coprecipitation by Al was less efficient in removing EPS from solution (maximum values of 33% at molar Al:C ratios of 0.1-0.2), the OC mass fraction in the solid product was substantially larger than that in adsorption complexes. Organic P compounds were preferentially bound during both adsorption and coprecipitation. Data are consistent with strong ligand exchange of EPS phosphoryl groups during adsorption to Al(OH)_3(am), whereas for coprecipitation weaker sorption mechanisms are also involved. X-ray photoelectron analyses indicate an intimate mixing of EPS with Al in the coprecipitates, which is not observed in the case of EPS adsorption complexes. The incubation experiments showed that both processes result in overall stabilization of EPS against microbial decay. Stabilization of adsorbed or coprecipitated EPS increased with increasing molar Al:C ratio and biodegradation was correlated with EPS desorption, implying that detachment of EPS from surface sites is a prerequisite for microbial utilization. Results indicate that the mechanisms transferring EPS into Al-organic associations may significantly affect the composition and stability of biomolecular C, N and P in soils. The observed efficient stabilization of EPS might explain the strong microbial character of organic matter in subsoils.     

Imaging Offsets in the Moho: Synthetic Tests using Gaussian Beams with Teleseismic Waves

We carry out a sequence of numerical tests to understand conditions under which rapid changes in crustal thickness can be reliably imaged by teleseismic body waves. Using the finite-difference method over a 2-D grid, we compute synthetic seismograms resulting from a planar P-wavefield incident below the grid. We then image the Moho using a migration scheme based on the Gaussian beam representation of the wavefield. The use of Gaussian beams for the downward propagation of the wavefield is particularly advantageous in certain geologically critical cases such as overthrusting of continental lithosphere, resulting in the juxtaposition of high-velocity mantle material over crustal rocks. In contrast to ray-based methods, Gaussian beam migration requires no special treatment to handle such heterogeneities. Our results suggest that with adequate station spacing and signal-to-noise ratios, offsets of the Moho, on the order of 10 km in height, can be reliably imaged beneath thickened crust at depths of about 50 km. Furthermore, even sharp corners and edges are faithfully imaged when precise values of seismic wave speeds are available. Our tests also demonstrate that flexibility in choices of different types of seismic phases is important, because any single phase has trade-offs in issues such as spatial resolution, array aperture, and amplitude of signals.     

Mixing and chemical interdiffusion of trachytic and latitic magma in a subvolcanic complex of the Tertiary Westerwald (Germany)

A special kind of magma mixing is extraordinarily well exposed in the Bittersberg subvolcanic complex in the Tertiary volcanic field of the German Westerwald: A trachytic melt has been penetrated by a latitic dyke which has been dispersed within the host magma as small spherical enclaves (globules). Whole rock analyses of the globules show a change in composition that cannot be explained by a simple mechanical mixing between the endmembers. The most evolved globules have a phonolitic composition. Microprobe measurements in the microlithic matrix of the host rock and the guest indicate a diffusive motion of the alkalis from the host into the globules. On the other hand, an opposite trend can be observed for Ca, Mg, Fe and Ti, which are impoverished in the globules. The trace elements and the middle rare earth elements (MREE) has also been involved in the diffusive exchange. The REE-pattern of the most evolved (phonolitic) globules shows a characteristic trough in the area of the MREE which is almost identical to the REE-pattern of many phonolites. The phonolites and the alkali-rich trachytes of the Westerwald show similar globular textures as the Bittersberg volcanics. Therefore, generation of these rocks involving diffusive element exchange during mixing processes in a magma reservoir situated on a deeper crustal level may be possible.     

Shear velocity estimates in rough‐bed open‐channel flow

Shear velocity u_* is an important parameter in geophysical flows, in particular with respect to sediment transport dynamics. In this study, we investigate the feasibility of applying five standard methods [the logarithmic mean velocity profile, the Reynolds stress profile, the turbulent kinetic energy (TKE) profile, the wall similarity and spectral methods] that were initially developed to estimate shear velocity in smooth bed flow to turbulent flow over a loose bed of coarse gravel (D₅₀ = 1·5 cm) under sub‐threshold conditions. The analysis is based on quasi‐instantaneous three‐dimensional (3D) full depth velocity profiles with high spatial and temporal resolution that were measured with an Acoustic Doppler Velocity Profiler (ADVP) in an open channel. The results of the analysis confirm the importance of detailed velocity profile measurements for the determination of shear velocity in rough‐bed flows. Results from all methods fall into a range of ± 20% variability and no systematic trend between methods was observed. Local and temporal variation in the loose bed roughness may contribute to the variability of the logarithmic profile method results. Estimates obtained from the TKE and Reynolds stress methods reasonably agree. Most results from the wall similarity method are within 10% of those obtained by the TKE and Reynolds stress methods. The spectral method was difficult to use since the spectral energy of the vertical velocity component strongly increased with distance from the bed in the inner layer. This made the choice of the reference level problematic. Mean shear stress for all experiments follows a quadratic relationship with the mean velocity in the flow. The wall similarity method appears to be a promising tool for estimating shear velocity under rough‐bed flow conditions and in field studies where other methods may be difficult to apply. This method allows for the determination of u_* from a single point measurement at one level in the intermediate range (0·3 < h < 0·6). Copyright © 2013 John Wiley & Sons, Ltd.     

Comparative dissolution kinetics of biogenic and chemogenic uraninite under oxidizing conditions in the presence of carbonate

The long-term stability of biogenic uraninite with respect to oxidative dissolution is pivotal to the success of in situ bioreduction strategies for the subsurface remediation of uranium legacies. Batch and flow-through dissolution experiments were conducted along with spectroscopic analyses to compare biogenic uraninite nanoparticles obtained from Shewanella oneidensis MR-1 and chemogenic UO_2.00 with respect to their equilibrium solubility, dissolution mechanisms, and dissolution kinetics in water of varied oxygen and carbonate concentrations. Both materials exhibited a similar intrinsic solubility of ∼10⁻⁸ M under reducing conditions. The two materials had comparable dissolution rates under anoxic as well as oxidizing conditions, consistent with structural bulk homology of biogenic and stoichiometric uraninite. Carbonate reversibly promoted uraninite dissolution under both moderately oxidizing and reducing conditions, and the biogenic material yielded higher surface area-normalized dissolution rates than the chemogenic. This difference is in accordance with the higher proportion of U(V) detected on the biogenic uraninite surface by means of X-ray photoelectron spectroscopy. Reasonable sources of a stable U(V)-bearing intermediate phase are discussed. The observed increase of the dissolution rates can be explained by carbonate complexation of U(V) facilitating the detachment of U(V) from the uraninite surface. The fraction of surface-associated U(VI) increased with dissolved oxygen concentration. Simultaneously, X-ray absorption spectra showed conversion of the bulk from UO_2.0 to UO_2+x. In equilibrium with air, combined spectroscopic results support the formation of a near-surface layer of approximate composition UO_2.25 (U₄O₉) coated by an outer layer of U(VI). This result is in accordance with flow-through dissolution experiments that indicate control of the dissolution rate of surface-oxidized uraninite by the solubility of metaschoepite under the tested conditions. Although U(V) has been observed in electrochemical studies on the dissolution of spent nuclear fuel, this is the first investigation that demonstrates the formation of a stable U(V) intermediate phase on the surface of submicron-sized uraninite particles suspended in aqueous solutions.