Biomarker induction in tropical fish species on the Northwest Shelf of Australia by produced formation water

Normal operation of oil well platforms results in the discharge of produced formation water (PFW). The expression of CYP1A, CYP2M1- and 2K1-like proteins was examined for use as possible biomarkers of PFW exposure. A pilot study on the Northwest Shelf of Australia had indicated that PFW contamination possibly contributes to induction of CYP1A-like proteins in Gold-Spotted Trevally (Carangoides fulvoguttatus). The pilot study samples were re-examined for CYP1A, and, in addition, CYP2K1/2M1-like proteins. In a subsequent caged fish study in the same location a second species, Stripey seaperch (Lutjanus carponotatus), caught at a clean site, were distributed to three caging sites in a PFW gradient from the Harriet A production platform: A (near-field), B (far-field) and C (a non-impacted reference site). Fish were sampled at time (T) T = 0, T = 3 and T = 10 days. Significant increases of CYP1A, one CYP2K1- and two CYP2M1-like proteins were noted at Site A at T = 10d. For another CYP2K1-like protein, a significant increase was observed at Site A only at T = 3d. These results support a previous study indicating that CYP1A protein is sensitive to PFW exposure. Importantly, statistically significant environmental induction of both CYP2M1- and CYP2K1-like proteins in tropical fish due to PFW exposure had not previously been described and induction of enzymes in the CYP2 family suggest new biomarkers for PFW. In addition, the novel response of one CYP2K-like protein requires further verification, but offers promise for improved monitoring of sub-lethal responses in marine organisms.     

Comparison of methods for the removal of organic carbon and extraction of chromium, iron and manganese from an estuarine sediment standard and sediment from the Calcasieu River estuary, Louisiana, U.S.A.

U.S. National Bureau of Standards (NBS) estuarine sediment 1646 from the Chesapeake Bay, Maryland, and surface sediment collected at two sites in the Calcasieu River estuary, Louisiana, were used to evaluate the dilute hydrochloric acid extraction of Cr, Fe and Mn from air-dried and freeze-dried samples that had been treated by one of three methods to remove organic carbon. The three methods for the oxidation and removal of organic carbon were: (1) 30% hydrogen peroxide; (2) 30% hydrogen peroxide plus 0.25 mM pyrophosphate; and (3) plasma oxidation (low-temperature ashing). There was no statistically significant difference at the 95% confidence level between air- and freeze-dried samples with respect to the percent of organic carbon removed by the three methods. Generally, there was no statistically significant difference at the 95% confidence level between air- and freeze-dried samples with respect to the concentration of Cr, Fe and Mn that was extracted, regardless of the extraction technique that was used. Hydrogen peroxide plus pyrophosphate removed the most organic carbon from sediment collected at the site in the Calcasieu River that was upstream from industrial outfalls. Plasma oxidation removed the most organic carbon from the sediment collected at a site in the Calcasieu River close to industrial outfalls and from the NBS estuarine sediment sample. Plasma oxidation merits further study as a treatment for removal of organic carbon. Operational parameters can be chosen to limit the plasma oxidation of pyrite which, unlike other Fe species, will not be dissolved by dilute hydrochloric acid. Preservation of pyrite allows the positive identification of Fe present as pyrite in sediments.     

Mohr circles for strain,simplified

The Mohr circle is a well known representation of two-dimensional strain. It is commonly used to illustrate strain algebra, or derive a strain ellipse from particular strain data. The established sign convention is positive (anticlockwise) shear strain on the upward ordinate, after Brace. However, in practice, confusion may easily arise from inconsistent conventions in standard text books. A Mohr-circle convention is proposed here which represents clockwise shear strain on the upward γ ordinate (i.e. upside-down). It simplifies the Mohr circle by representing both single and double angles in their natural sense. Single angles may be traced from rock to Mohr circle directly which is not the case for the Brace circle. Deformed brachiopods and stretched belemnites are used to illustrate this simplified Mohr circle. The pole to the Mohr circle is a useful addition which allows strain data to be represented in their true orientation. The pole method only works on the γ clockwise-up Mohr circle. The Mohr circle is useful to demonstrate simple-shear geometry and algebra. Successive Mohr circles with poles may be used to map strain across a heterogeneous simple-shear zone.     

Sources of debris flow material in burned areas

The vulnerability of recently burned areas to debris flows has been well established. Likewise, it has been shown that many, if not most, post-fire debris flows are initiated by runoff and erosion and grow in size through erosion and scour by the moving debris flow, as opposed to landslide-initiated flows with little growth. To better understand the development and character of these flows, a study has been completed encompassing 46 debris flows in California, Utah, and Colorado, in nine different recently burned areas. For each debris flow, progressive debris production was measured at intervals along the length of the channel, and from these measurements graphs were developed showing cumulative volume of debris as a function of channel length. All 46 debris flows showed significant bulking by scour and erosion, with average yield rates for each channel ranging from 0.3 to 9.9 m³ of debris produced for every meter of channel length, with an overall average value of 2.5 m³/m. Significant increases in yield rate partway down the channel were identified in 87% of the channels, with an average of a three-fold increase in yield rate. Yield rates for short reaches of channels (up to several hundred meters) ranged as high as 22.3 m³/m. Debris was contributed from side channels into the main channels for 54% of the flows, with an average of 23% of the total debris coming from those side channels. Rill erosion was identified for 30% of the flows, with rills contributing between 0.1 and 10.5% of the total debris, with an average of 3%. Debris was deposited as levees in 87% of the flows, with most of the deposition occurring in the lower part of the basin. A median value of 10% of the total debris flow was deposited as levees for these cases, with a range from near zero to nearly 100%. These results show that channel erosion and scour are the dominant sources of debris in burned areas, with yield rates increasing significantly partway down the channel. Side channels are much more important sources of debris than rills. Levees are very common, but the size and effect on the amount of debris that reaches a canyon mouth is highly variable.     

Environmental and socioeconomic dynamics of the Indian Ocean tsunami in Penang,Malaysia

This paper addresses some of the environmental and socioeconomic dimensions of the 2004 Indian Ocean tsunami on Penang, Malaysia. We aim to offer wide access to unique and perishable data, while at the same time providing insight to ongoing debates about hazards, vulnerability and social capital. Our social survey examines some of the dynamics that shaped the tsunami impact, response and recovery process. While in terms of lives lost Penang may not conform to arguments surrounding vulnerable environments, the recovery process is more marked by social disparities in terms of the ability to access resources. Our physical survey records local topography, flow depth and flow direction, and charts the differential impact of the tsunami. Yet measuring hazards is not a straightforward process, and relies on reflexive methodologies and eyewitness accounts.     

Conditions for generation of fire‐related debris flows,Capulin Canyon,New Mexico

Comparison of the responses of three drainage basins burned by the Dome fire of 1996 in New Mexico is used to identify the hillslope, channel and fire characteristics that indicate a susceptibility specifically to wildfire‐related debris flow. Summer thunderstorms generated three distinct erosive responses from each of three basins. The Capulin Canyon basin showed widespread erosive sheetwash and rilling from hillslopes, and severe flooding occurred in the channel; the North Tributary basin exhibited extensive erosion of the mineral soil to a depth of 5 cm and downslope movement of up to boulder‐sized material, and at least one debris flow occurred in the channel; negligible surface runoff was observed in the South Tributary basin. The negligible surface runoff observed in the South Tributary basin is attributed to the limited extent and severity of the fire in that basin. The factors that best distinguish between debris‐flow producing and flood‐producing drainages are drainage basin morphology and lithology. A rugged drainage basin morphology, an average 12 per cent channel gradient, and steep, rough hillslopes coupled with colluvium and soil weathered from volcaniclastic and volcanic rocks promoted the generation of debris flows. A less rugged basin morphology, an average gradient of 5 per cent, and long, smooth slopes mantled with pumice promoted flooding. Flood and debris‐flow responses were produced without the presence of water‐repellent soils. The continuity and severity of the burn mosaic, the condition of the riparian vegetation, the condition of the fibrous root mat, accumulations of dry ravel and colluvial material in the channel and on hillslopes, and past debris‐flow activity, appeared to have little bearing on the distinctive responses of the basins. Published in 2000 by John Wiley & Sons, Ltd.     

Status of China’s Mineral Resources in 2013

正On 22nd April 2014,with the approach of the 45th World Earth Day,China’s Ministry of Land and resources issued the status of China’s mineral resources in 2013.The first task of the prospecting breakthrough strategy action implemented in the last five years has been completed,and China’s security capacity for mineral resources has been significantly improved.In the     

Detection of stress in tomatoes induced by late blight disease in California, USA, using hyperspectral remote sensing

Large-scale farming of agricultural crops requires on-time detection of diseases for pest management. Hyperspectral remote sensing data taken from low-altitude flights usually have high spectral and spatial resolutions, which can be very useful in detecting stress in green vegetation. In this study, we used late blight in tomatoes to illustrate the capability of applying hyperspectral remote sensing to monitor crop disease in the field scale and to develop the methodologies for the purpose. A series of field experiments was conducted to collect the canopy spectral reflectance of tomato plants in a diseased tomato field in Salinas Valley of California. The disease severity varied from stage 1 (the light symptom), to stage 4 (the sever damage). The economic damage of the crop caused by the disease is around the disease stage 3. An airborne visible infrared imaging spectrometer (AVIRIS) image with 224 bands within the wavelength range of 0.4–2.5 μm was acquired during the growing season when the field data were collected. The spectral reflectance of the field samples indicated that the near infrared (NIR) region, especially 0.7–1.3 μm, was much more valuable than the visible range to detect crop disease. The difference of spectral reflectance in visible range between health plants and the infected ones at stage 3 was only 1.19%, while the difference in the NIR region was high, 10%. We developed an approach including the minimum noise fraction (MNF) transformation, multi-dimensional visualization, pure pixels endmember selection and spectral angle mapping (SAM) to process the hyperspectral image for identification of diseased tomato plants. The results of MNF transformation indicated that the first 28 eigenimages contain useful information for classification of the pixels and the rest were mainly noise-dominated due to their low eigenvalues that had few signals. Therefore, the 28 signal eigenimages were used to generate a multi-dimensional visualization space for endmember spectra selection and SAM. Classification with the SAM technique of plants’ spectra showed that the late blight diseased tomatoes at stage 3 or above could be separated from the healthy plants while the less infected plants (at stage 1 or 2) were difficult to separate from the healthy plants. The results of the image analysis were consistent with the field spectra. The mapped disease distribution at stage 3 or above from the image showed an accurate conformation of late blight occurrence in the field. This result not only confirmed the capability of hyperspectral remote sensing in detecting crop disease for precision disease management in the real world, but also demonstrated that the spectra-based classification approach is an applicable method to crop disease identification.     

Major ionic composition of precipitation in the Nam Co region, Central Tibetan Plateau

A total of 48 precipitation samples have been collected from individual precipitation events at the Nam Co Monitoring and Research Station for Multisphere Interactions (Nam Co Station, 30°47′N, 90°58′E; 4730 m a.s.l) located in the central Tibetan Plateau from August 2005 to August 2006. All samples were analyzed for major cations (NH₄⁺, Na⁺, K⁺, Ca²⁺ and Mg²⁺) and anions (Cl⁻, NO₃⁻ and SO₄²⁻), conductivity and pH. Precipitation pH values ranged from 6.03 to 7.38 with an average value of 6.59. The high pH is due to large inputs of crustal aerosols in the atmosphere, which contain a large fraction of carbonate. Ca²⁺ is the dominant cation in precipitation with an average value of 65.58 μeq L^− 1 (4.91–301.41 μeq L^− 1), accounting for 54% of the total cations in precipitation. HCO₃⁻ is the predominant anion, accounting for 62% of the total anions. When compared with data from a snow pit in the Zhadang Glacier 50 km away (5800 m a.s.l), major ion concentration in precipitation at the Nam Co Station is much higher due to local aerosol inputs. Correlation and empirical orthogonal function (EOF) analysis indicate that regional crustal aerosols and species from combustion emissions of residents are the major sources for these ions, lake salt aerosols from the Nam Co nearby and regional mineral aerosols from dry lake sediments are secondary sources, and sea salt contribution is the least due to the long distance transport.     

Evaporative evolution of a Na–Cl–NO<Subscript>3</Subscript>–K–Ca–SO<Subscript>4</Subscript>–Mg–Si brine at 95 °C: Experiments and modeling relevant to Yucca Mountain,Nevada

A synthetic Topopah Spring Tuff water representative of one type of pore water at Yucca Mountain, NV was evaporated at 95°C in a series of experiments to determine the geochemical controls for brines that may form on, and possibly impact upon the long-term integrity of waste containers and drip shields at the designated high-level, nuclear-waste repository. Solution chemistry, condensed vapor chemistry, and precipitate mineralogy were used to identify important chemical divides and to validate geochemical calculations of evaporating water chemistry using a high temperature Pitzer thermodynamic database. The water evolved toward a complex "sulfate type" brine that contained about 45 mol % Na, 40 mol % Cl, 9 mol % NO₃, 5 mol % K, and less than 1 mol % each of SO₄, Ca, Mg, ∑CO₂(aq), F, and Si. All measured ions in the condensed vapor phase were below detection limits. The mineral precipitates identified were halite, anhydrite, bassanite, niter, and nitratine. Trends in the solution composition and identification of CaSO₄ solids suggest that fluorite, carbonate, sulfate, and magnesium-silicate precipitation control the aqueous solution composition of sulfate type waters by removing fluoride, calcium, and magnesium during the early stages of evaporation. In most cases, the high temperature Pitzer database, used by EQ3/6 geochemical code, sufficiently predicts water composition and mineral precipitation during evaporation. Predicted solution compositions are generally within a factor of 2 of the experimental values. The model predicts that sepiolite, bassanite, amorphous silica, calcite, halite, and brucite are the solubility controlling mineral phases.