Impact of flood events on macrobenthic community structure on an intertidal flat developing in the Ohta River Estuary

We investigated the effects of river floods on the macrobenthic community of the intertidal flat in the Ohta River Estuary, Japan, from 2005 to 2010. Sediment erosion by flood events ranged from about 2–3 cm to 12 cm, and the salinity dropped to 0‰ even during low-intensity flood events. Cluster analysis of the macrobenthic population showed that the community structure was controlled by the physical disturbance, decreased salinity, or both. The opportunistic polychaete Capitella sp. was the most dominant species in all clusters, and populations of the long-lived polychaete Ceratonereis erythraeensis increased in years with stable flow and almost disappeared in years with intense flooding. The bivalve Musculista senhousia was also an important opportunistic species that formed mats in summer of the stable years and influenced the structure of the macrobenthic community. Our results demonstrate the substantial effects of flood events on the macrobenthic community structure.     

Analytical methods for error propagation in planar space–time prisms

The space–time prism demarcates all locations in space–time that a mobile object or person can occupy during an episode of potential or unobserved movement. The prism is central to time geography as a measure of potential mobility and to mobile object databases as a measure of location possibilities given sampling error. This paper develops an analytical approach to assessing error propagation in space–time prisms and prism–prism intersections. We analyze the geometry of the prisms to derive a core set of geometric problems involving the intersection of circles and ellipses. Analytical error propagation techniques such as the Taylor linearization method based on the first-order partial derivatives are not available since explicit functions describing the intersections and their derivatives are unwieldy. However, since we have implicit functions describing prism geometry, we modify this approach using an implicit function theorem that provides the required first-order partials without the explicit expressions. We describe the general method as well as details for the two spatial dimensions case and provide example calculations.     

The influence of alongshore and cross‐shore wave energy flux on large‐ and small‐scale coastal erosion patterns

A strong low‐pressure system traveled along the Japanese main island Honshu in October 2006. High waves and storm surge attacked the Kashima Coast resulting in huge erosion over the area. Airborne laser data measured in October 2005 and November 2006 were analyzed to estimate cross‐sectional changes within the subaerial zone. The results of the alongshore distribution of the changes of cross‐sectional area indicate that the amount of erosion of the 38 km‐long northern and 15 km‐long southern parts decreased toward the south in each part and that the amount of erosion was smaller in protected areas with artificial headlands than in unprotected areas. The local alongshore variation of the erosion and accretion patterns showed wavy fluctuations of several hundreds of meters. The total amounts of the estimated eroded volume of the subaerial zone over the northern and southern parts were 620 000 m³ and 600 000 m³, respectively. The Simulating Waves Nearshore (SWAN) wave model was applied to estimate wave conditions along the coast during the storm. The computational results were verified, and then the alongshore distribution of wave energies, expressed as the alongshore and cross‐shore components of the wave energy flux, was compared with the alongshore distribution of cross‐sectional change. The results show that the distribution of energy flux explains the distribution of erosion well: The alongshore variability in the cross‐shore energy flux is responsible for the large‐scale variability in erosion, and shorter‐scale variability is due to gradients in the alongshore energy fluxes, especially for the areas without coastal works. Copyright © 2011 John Wiley & Sons, Ltd.     

Microtopographic properties of sparse moss vegetation in the Antarctic polar desert

The effect of topography on moss vegetation is examined to clarify the processes that affect the colonization of polar deserts on continental Antarctica. Data on the presence of the mosses Bryum pseudotriquetrum and Pottia heimii, and relative altitude were recorded. The altitude measurements were used to infer the underlying topographical attributes of the substrate in the study plots. Specifically, the local distribution of moss plants was clarified using the topographical attributes to construct generalized linear mixed models (GLMMs). The models suggested that steep slopes and convex microhabitats within areas of concave general relief (at the plot scale 4 × 4 m) promoted the establishment of moss. This correspondence to general relief was more apparent for B. pseudotriquetrum than for P. heimii. Among the study plots, general relief was found to be an important determinant of the precise spatial distribution of B. pseudotriquetrum. The standard surface estimated using the robust methods presented in this study is shown to be more accurate for describing moss distribution than the prevailing least-squares method.     

3-D internal architecture of methane hydrate-bearing turbidite channels in the eastern Nankai Trough, Japan

The reservoir architecture of methane hydrate (MH) bearing turbidite channels in the eastern Nankai Trough, offshore Japan is evaluated using a combination of 3-D seismic and well data. On the 3-D seismic section, the MH-bearing turbidite channels correspond to complex patterns of strong seismic reflectors, which show the 3-D internal architecture of the channel complex. A seismic-sequence stratigraphic analysis reveals that the channel complex can be roughly classified into three different stages of depositional sequence (upper, middle, and lower). Each depositional sequence results in a different depositional system that primarily controls the reservoir architecture of the turbidite channels. To construct a 3-D facies model, the stacking patterns of the turbidite channels are interpreted, and the reservoir heterogeneities of MH-bearing sediments are discussed. The identified channels at the upper sequence around the β1 well exhibit low-sinuosity channels consisting of various channel widths that range from tens to several hundreds of meters. Paleo-current flow directions of the turbidite channels are typically oriented along the north-northeast-to-south-southwest direction. High-amplitude patterns were identified above the channels along the north-to-south and north-northeast-to-south-southeast directions. These roughly coincide with the paleo-current flow of the turbidite channels. An interval velocity using high-density velocity analysis shows that velocity anomalies (>2000 m/s) are found on the northeastern side of the turbidite channels. The depositional stage of the northeastern side of the turbidite channels exhibits slightly older sediment stages than the depositional stages of the remaining channels. Hence, the velocity anomalies of the northeastern side of the channels are related to the different stages of sediment supply, and this may lead to the different reservoir architectures of the turbidite channels.     

Importance of intracellular Fe pools on growth of marine diatoms by using unialgal cultures and on the Oyashio region phytoplankton community during spring

We report on the ability for luxury Fe uptake and the potential for growth utilizing intracellular Fe pools for 4 coastal centric diatom isolates and in situ phytoplankton assemblages, mainly composed of diatoms. Iron uptake of the diatom isolates and natural phytoplankton assemblages in the Oyashio region during spring blooms were prevented by adding hydroxamate siderophore desferrioxamine B (DFB). After the addition of DFB, intracellular Fe in the diatom isolates supported 2.4–4.2 cell divisions with 1.2–2.6 Chl a doublings. The intracellular Fe was primarily used for cell generation rather than Chl a production, leading to a reduction in the Chl a cell quota in the Fe-starved cells with time. The metabolic properties of the Fe-starved cells with their cell morphologies were different among species or genera. An on-deck incubation experiment also exhibited 1.9 cell divisions and 0.81 Chl a doublings of phytoplankton after the addition of DFB, also indicating the preference of cell generation over Chl a production. A decrease in the level of cellular Chl a, a main light-harvesting pigment in Fe-starved diatoms, may become a superior survival strategy to protect the cells from high irradiance that can cause photo-oxidative damages through photosynthesis. Such relatively low-Fe with high-light conditions could often occur in surface waters of the Oyashio region from spring to summer.     

Breaking pattern and critical breaking condition of Japanese pine trees on coastal sand dunes in huge tsunami caused by Great East Japan Earthquake

Coastal vegetation is widely recognized to reduce tsunami damage to people and buildings, and it has been studied recently because it requires relatively little capital investment compared with artificial measures, provides human-friendly beach fronts, and enhances inter-relationships with other ecological systems. However, the tsunami caused by the Great East Japan Earthquake at 14:46 JST on March 11, 2011, with a magnitude of 9.0 and epicenter 129?km east of Sendai, broke most of the sea wall (tsunami gates, large embankments) and caused catastrophic damage to coastal forests in the Tohoku and Kanto districts of Japan. A field survey was conducted to elucidate the critical breaking condition of Japanese coastal pine trees. Tree-trunk breakage was observed when the sea embankment was washed out or when there was no sea embankment and the tree was under strong inertia force or impact force by debris. Even though the trunk bending and breaking phenomena are different, statistical analysis showed that the critical diameters for trunk bending and trunk breaking were not very different. The overturning phenomenon is a little more complex than trunk breaking because the resistive force is a function of the substrate and root anchorage. An equation to determine the critical diameters for trunk bending, trunk breaking, and overturning was derived as a function of tsunami water depth, soil-root strength, and the hydrodynamic parameter (H _D ) formulated by Froude number, drag coefficient, and the ratio of impact force to drag force considering the physical mechanisms to resist the tsunami. Trunk bending and breaking were closely related to tsunami water depth and the hydrodynamic parameter (H _D ), but tree overturning was found to be more site specific, and the root-soil strength greatly affected the critical value. The proposed critical diameter equation and its coefficient are useful for the design of an inland forest of pine trees that can trap large trees, cars, debris, etc., to its breaking limit. The trapping function should be utilized more in the future designs of inland forests, if possible, on embankments.     

Study of Water Motion at the Dissolved Oxygen Minimum Layer and Local Oxygen Consumption Rate from the Lagrangian Viewpoint

By using the Euler-Lagrangian method, we examine water movements within the layer of minimum oxygen concentration and estimate local oxygen consumption rates for 15 regions of the global ocean. To do this, a number of labeled particles (which represent water parcels) are deployed at the center of a grid with 15 depth levels and tracked backward in time for 50 years in a three-dimensional velocity field. We assume that a particle picks up oxygen when it encounters the point of maximum oxygen concentration along the 50 years segment of its path. We introduce a contribution rate from waters distributed throughout the global ocean to the oxygen concentration of a local layer under consideration. Water parcels which are assumed to pick up oxygen within the oxygen minimum layer of an oceanic region under consideration make a very small contribution to the overall oxygen concentration of this layer. In addition, these parcels move out of the layer and water parcels from the upper layers take their place. The averaged Lagrangian local oxygen consumption rate is 0.033 ml/l/yr for the depth of the oxygen minimum layer, 0.20 ml/l/yr at 100 m depth (euphotic layer), 0.043 ml/l/yr for layers from 150 m to 800 m depth and 0.012 ml/l/yr for deep layers from 800 m to 3000 m. The present Lagrangian numerical experiment produces a maximum difference between observed and calculated concentrations of oxygen and, therefore, a maximum oxygen consumption rate. Although the present method has an ambiguity as to how oxygen is picked up, we nevertheless were able to identify regions in which the water parcels pick up oxygen of maximum concentration. We found that the South Equatorial Current (SEC) transports oxygen of higher concentration to the middle latitude regions of both the North Atlantic and the North Pacific across the equator.     

Fluorine contents of some hydrous minerals derived from upper mantle and lower crust

Fluorine contents have been determined in about forty samples of amphibole, mica and apatite in alkali basalt and kimberlite and their incorporated xenoliths. They show a wide variation ranging from 15,000 to 100 ppm, corresponding to about 40 to 0.2 per cent substitution of F for OH in hydroxyl site of hydrous minerals. Fluorine abundances in these minerals reflect those of their host magmas or rocks; Itinome-gata xenoliths are the lowest and South African kimberlites and their xenoliths are the highest. F/OH and also. D/H (Kuroda et al. 1975) ratios in coexisting phlogopite-potassic richterite from peridotite and mica nodules are thoughts to have formed under no simple equlibrium conditions.     

Characteristics of rainfall systems accompanied with Changma front at Chujado in Korea

The rainy season from June to July in the East Asia is called the Changma in Korea, the Meiyu in China, or the Baiu in Japan. The mesoscale convective systems which occur near a front frequently lead to severe weather phenomenon such as localized gust and heavy rainfall. An intensive field experiment was conducted at Chujado (33.95°N, 126.28°E) to find out the characteristics of the precipitating system using information such as the raindrop size distribution, kinematic features during a Changma period between June 21 2007 and July 11 2007. Different characteristics of three identified rainfall cases in a Changma frontal precipitation system occurred from 5 to 6 July in 2007 at Chujado area have been identified. Based on the radar reflectivity and raingage at Chujado, each rainfall system maintained for 7 hours, 4 hours, and 9 hours, respectively. According to the analysis of a total vertical wind shear (TVWS) and a directional vertical wind shear (DVWS), the temperature gradient was the strongest near the surface and both warm and cold advections were occurred in all cases but at different levels. The deep warm advection was related to the longer rainfall lifetime and stronger rainrate, but smaller raindrop size. The unstable atmospheric condition, which has cold advection at the surface and warm advection in higher level, caused the larger size diameter of raindrop. The echo top height of 30 dBZ was around 6 km in the two rainfall systems and around 4 km in the other one. The number concentrations of raindrop has turning point at the drop size of 2 mm in diameter. The stronger (weaker) updraft and downdraft were also related to the decreased number concentration of smaller (larger) size drops and increased that of the larger (smaller) drops.