Expression of superoxide dismutase (SOD) genes from the copper-exposed polychaete, Neanthes succinea

To evaluate the superoxide dismutase (SOD) genes as a potential indicator of environmental stress, we cloned and sequenced the full-length cDNA of a Cu/Zn-SOD and Mn-SOD genes from the marine polychaete, Neanthes succinea. Ns-Cu/Zn- and Mn-SOD expression was measured using quantitative real-time RT-PCR in response to the oxidative stress induced by copper in the form of CuCl2. Ns-Cu/Zn-SOD expression increased in a dose dependent manner but the increase of Mn-SOD expression was evident only at a high concentration of copper. Particularly, Ns-Mn-SOD dramatically increased in the 72 μg/L CuCl2-exposed groups, indicating that both Ns-SOD genes were induced by copper exposure. These results suggest that Ns-Cu/Zn- and Ns-Mn-SOD would play important roles in the detoxification of cellular oxidative stresses in the polychaete, N. succinea. Furthermore, as part of field work, the marine polychaete, N. succineaCu/Zn-SOD mRNA collected from the polluted area was accordingly upregulated in expression but not for NS-Mn-SOD.     

Immune responses to combined effect of hypoxia and high temperature in the green-lipped mussel Perna viridis

Flow cytometry was used to examine immune responses in haemocytes of the green-lipped mussel Perna viridis under six combinations of oxygen level (1.5 mg O2 l(-1), 6.0 mg O2 l(-1)) and temperature (20 °C, 25 °C and 30 °C) at 24 h, 48 h, 96 h and 168 h. The mussels were then transferred to normoxic condition (6.0 mg O2 l(-1)) at 20 °C for further 24 h to study their recovery from the combined hypoxic and temperature stress. Esterase (Est), reactive oxygen species (ROS), lysosome content (Lyso) and phagocytosis (Pha) were reduced at high temperatures, whereas hypoxia resulted in higher haemocyte mortality (HM) and reduced phagocytosis. For HM and Pha, changes were observed after being exposed to the stresses for 96 h, whereas only a 24 h period was required for ROS and Lyso, and a 48 h one for Est. Recovery from the stresses was observed for HM and Pha but not other immune responses.     

Geotectonic framework of Permo–Triassic magmatism within the Korean Peninsula

This study presents sensitive high-resolution ion microprobe (SHRIMP) U–Pb zircon ages, and whole-rock chemical and isotopic (Sr-Nd) compositions of representative Triassic plutons from South Korea. The plutons from the Gyeonggi massif (Hongseong, Namyang, Yangpyeong and Odesan), the central Okcheon belt (Baeknok and Yongsan), and the Yeongnam massif (Sangju, Gimcheon, Hamyang and Macheon) yield zircon U–Pb ages of ca. 232–226 Ma, 227–226 Ma, and 240–228 Ma, respectively. Among the Triassic plutonic suite in South Korea, those within the Gyeonggi massif are dominated by granite, syenite, monzonite, monzodiorite and gabbro. Plutons within the Okcheon belt are mainly by granite to quartz monzodiorite. The Yeongnam massif mainly incorporates granite to granodiorite and minor monzodiorite intrusions. The geochemical signatures of the Triassic plutons are characterized by Ta–Nb troughs, depletion of P and Ti, and enrichment of LILE. Most plutons except Macheon monzodioritic pluton show high initial ⁸⁷Sr/⁸⁶Sr ratios (0.708248–0.714678) and strongly negative ε_Nd(T) (− 20.3 to − 7.7) values, suggesting contribution from middle to upper crust. In contrast, the Macheon monzodioritic pluton in the Yeongnam massif shows relatively low initial ⁸⁷Sr/⁸⁶Sr ratios (0.706547-0.706629) and negative ε_Nd(T) (− 4.43 to − 3.62) values. The Middle Triassic syenite–monzonite–granite–gabbro series in and around the Gyeonggi massif possess high-K calc-alkaline and shoshonitic affinity suggesting a post-collisional magmatic event following the Permo–Triassic collision between the North and South China blocks. The Triassic plutons in the Yeongnam massif and the Okcheon belt, together with a Permian Yeongdeok pluton in the Gyeongsang basin, show features typical of high- to medium-K calc-alkaline magmatism with LREE and LILE enrichments. This together with a depletion of Y and HREE suggests their formation in a subduction setting. Our results provide robust evidence to consider the Gyeonggi massif as an extension of the Qinling–Dabie–Sulu belt between the North and South China blocks in central China. The Okcheon belt and Yeongnam massif in South Korea, together with the continental margin of South China, are marked by a common Permian to Triassic magmatic episode, probably related to the paleo-Pacific slab subduction.     

Stabilization of arsenic-contaminated mine tailings using natural and calcined oyster shells

Natural oyster shells (NOS) and calcined oyster shells (COS) were used to immobilize arsenic (As) from contaminated mine tailings. In addition, a blend of Portland cement (PC)/cement kiln dust (CKD) was used as a stabilizing agent. The Korean Standard Test (KST) method (1 N HCl extraction) was used to evaluate the effectiveness of the treatment. The experimental results showed that COS effectively immobilized As in treated mine tailings. Specifically, an As concentration less than 1 mg L⁻¹ was obtained following COS treatment at 25 and 30 wt%. However, all the samples subjected to NOS treatments failed the Korean warning standard of 1.2 mg L⁻¹ after 28 days of curing. All of the COS-PC treatments were successful meeting the Korean warning standard after 7 days of curing. However, the PC-only treatment failed to meet the Korean warning standard. Similarly, the CKD-only treatment was failed to meet the Korean warning standard after 7 days of curing. However, the COS-CKD treatment showed that when the COS content was greater than 20 wt%, less than 1 mg L⁻¹ of As leachability was obtained. Scanning electron microscopy–energy dispersive X-ray spectroscopy (SEM–EDX) showed needle-like and torpedo-like Ca–As phases in the COS-treated samples suggesting that As was strongly associated with Ca and O. X-ray absorption near edge structure (XANES) analyses confirmed that As(V) was prevalent in the tailings and that there were no changes in As speciation following NOS or COS treatment.     

Characterizing lipid biomarkers in methanotrophic communities of gas hydrate-bearing sediments in the Sea of Okhotsk

We studied specific lipid biomarkers of archaea and bacteria, that are associated with the anaerobic oxidation of methane (AOM) in a cold seep environment as well as the origin of sedimentary organic matter on the continental slope off NE Sakhalin in the Sea of Okhotsk. The organic geochemical parameters demonstrated that most of the sedimentary organic matter containing hydrate layers could be derived from marine phytoplankton and bacteria, except for a station (LV39-29H) which was remarkably affected by terrestrial vascular plant. Specific methanotrophic archaea biomarkers was vertically detected in hydrate-bearing cores (LV39-40H), coinciding with the negative excursion of the δ¹³C_org at core depths of 90–100 cm below the seafloor. These results suggest that methane provided from gas hydrates are already available substrates for microbes thriving in this sediment depth. In addition, the stable isotope mass balance method revealed that approximately 2.77–3.41% of the total organic carbon (or 0.036–0.044% dry weight sediment) was generated by the activity of the AOM consortium in the corresponding depth of core LV39-40H. On the other hand, the heavier δ¹³C values of archaeol in the gas hydrate stability zone may allow ongoing methanogenesis in deeper sediment depth.     

Permo-Triassic high-pressure metamorphism in the central western Korean Peninsula,and its link to Paleo-Tethyan Ocean closure: Key issues revisited

Permo-Triassic high-pressure(HP) mafic granulites, together with the Bibong retrogressed eclogite,preserved along the central western Korean Peninsula provide important insights into the Late Permian to Triassic collisional orogeny in northeast Asia. The metamorphic pressureetemperatureetime(P-T-t)paths of these rocks, however, remain poorly constrained and even overestimated, owing to outdated geothermobarometers and inaccurate isopleth techniques. Here we evaluate the metamorphic Pe T conditions of Triassic HP mafic granulites including those in Baekdong, Sinri and Daepan and the Bibong Triassic retrogressed eclogite in the Hongseong area, and the Permo-Triassic Samgot mafic granulite in the Imjingang Belt of the central western Korean Peninsula through the application of modern phase equilibria techniques. The Baekdong and Samgot mafic granulites and the Bibong retrogressed eclogite yield a range of 12.0 -16.0 kbar and 800 -900℃, representing HP granulite facies conditions. The Sinri and Daepan granulites from the Hongseong area show relatively lower grade metamorphic conditions between HP granulite and normal granulite facies, and are characterized by sub-isothermal decompression during exhumation. The similarities in the metamorphic ages and the post-collisional igneous activity from the central western Korean Peninsula indicate that the Triassic ages represent the retrograde stage of the metamorphic Pe T paths. In contrast, the Late Permian metamorphic ages, which are older than protolith ages of the post-collisional igneous rocks, correspond to the possible prograde stage of metamorphism. The P-T-t paths presented in this paper, together with the metamorphic ages and post-orogenic igneous events reported from these areas suggest trace of the subduction, accretion and exhumation history, and indicate a tectonic linkage among the northeast Asian continents during the Paleo-Tethyan Ocean closure.     

The role of mechanical stratigraphy in the lateral variations of thrust development along the central Alberta Foothills,Canada

Fold-thrust belts generally exhibit significant variations in structural styles such as differences in thrust geometries and frequencies in imbrication. A natural laboratory of this pattern is preserved in the central Alberta Foothills of the Canadian Rockies, where differences in thrust geometries are represented by the existence vs. non-existence of triangle zones. To seek the factors that make this difference in these regions in terms of structural geometry, stratigraphic thickness variations and mechanical stratigraphy of the sedimentary layers, structural interpretation is conducted based on admissible cross-sections and well log interpretations. In northern region, a backthrust is detached from an incompetent layer(viz.Nomad Unit of the Wapiabi Formation), which gets thinner from the Foothills to the Plains, indicating that it is developed where the shale layers are pinched out where triangle zone is developed. Backthrust is also developed in the southern region, where mechanical strengths of strata(viz. Bearpaw Formation)increase toward the foreland. In the central region, however, only forethrusts are developed along the weak continuous decollement layers(viz. Turner Valley and Brazeau formations), forming an imbricate fan without development of the triangle zone. Incompetent layers such as the top Wapiabi(Nomad),Brazeau(Bearpaw), Coalspur and Paskapoo formations are also pinched out laterally, forming fault glide horizons in different stratigraphic levels in each region. These results indicate that, along the transport direction, triangle zone is developed in relation to the stratigraphic pinch out of the Nomad Unit in the northern region, and is formed associated with the variations in strengths of the layers constituting the Bearpaw Formation in the southern region. It is notable that all the glide horizons are developed along incompetent layers. However, triangle zones are not developed in the areas of continuous stratigraphy of the Nomad Unit, which does not serve as a glide horizon in the central region. This suggests that factors such as stratigraphic thickness changes of incompetent layers and mechanical stratigraphy of the sedimentary layers play an important role in the development of lateral variations in thrust system evolution in terms of triangle zone vs. imbricate fan in the central Alberta Foothills.     

Late Pliocene to Quaternary sedimentary facies and stratigraphy of shallow-water contourite deposits in the Hupo Basin,East Sea of Korea

Marine Geophysical Research - This study entails the characterization of the depositional environment of the Hupo Basin shelf. By means of sedimentary structure analysis, grain size, textures,...     

Current Structure and Volume Transport in the Jeju Strait Observed for a Year with Multiple ADCP Moorings

Ocean Science Journal - The seasonal and spatial variation of the current structure and volume transport across the Jeju Strait (JS) is described based on an analysis of the data from five bottom...     

Seasonal changes in camera-based indices from an open canopy black spruce forest in Alaska,and comparison with indices from a closed canopy evergreen coniferous forest in Japan

Evaluation of the carbon, water, and energy balances in evergreen coniferous forests requires accurate in situ and satellite data regarding their spatio-temporal dynamics. Daily digital camera images can be used to determine the relationships among phenology, gross primary productivity (GPP), and meteorological parameters, and to ground-truth satellite observations. In this study, we examine the relationship between seasonal variations in camera-based canopy surface indices and eddy-covariance-based GPP derived from field studies in an Alaskan open canopy black spruce forest and in a Japanese closed canopy cedar forest. The ratio of the green digital number to the total digital number, hue, and GPP showed a bell-shaped seasonal profile at both sites. Canopy surface images for the black spruce forest and cedar forest mainly detected seasonal changes in vegetation on the floor of the forest and in the tree canopy, respectively. In contrast, the seasonal cycles of the ratios of the red and blue digital numbers to the total digital numbers differed between the two sites, possibly due to differences in forest structure and leaf color. These results suggest that forest structural characteristics, such as canopy openness and seasonal forest-floor changes, should be considered during continuous observations of phenology in evergreen coniferous forests.