Distributions of dissolved and particulate biogenic thiols in the subartic Pacific Ocean

Dissolved and particulate concentrations of the biogenic thiols cysteine (Cys), arginine–cysteine (Arg–Cys), glutamine–cysteine (Gln–Cys), γ-glutamate–cysteine (γ-Glu–Cys) and glutathione (GSH) were measured in the subartic Pacific Ocean in the summer of 2003 using high performance liquid chromatography (HPLC) with precolumn derivatization as reported in previous work. In this study, a preconcentration protocol for the derivatized thiols was utilized to extend detection limits of dissolved thiols to picomolar levels. The measured concentrations of particulate and dissolved thiols were uncoupled, with distinctive depth profiles and large differences in the particulate to dissolved ratios between individual compounds. Glutathione was the most abundant particulate thiol whereas the most abundant dissolved thiol was γ-Glu–Cys, with concentrations as high as 15 nM. Given the relatively small pool of intracellular γ-Glu–Cys and the very low dissolved concentrations of GSH, we hypothesize that glutathione released from cells is rapidly converted to the potentially degradation resistant γ-Glu–Cys outside the cell. The relatively high concentrations of other dissolved thiols compared to particulate concentrations implies both biological exudation and slow degradation rates. Some thiols appear to vary with changes in nutrient availability but this effect is difficult to decouple from changes in community structure inferred from pigment analyses. Dissolved thiol concentrations also exceed typical metal concentrations in the subartic Pacific, supporting previous arguments that they may be important in metal speciation.     

Parallel experiments with Thalassiosira rotula in outdoor plastic tanks: Development of dissolved free amino acids during an algae bloom

Three outdoor plastic tanks were filled with North Sea water. The water was filtered free of algae and inoculated with the diatom Thalassiosira rotula. Under nearly natural nutrient supply an exponential plankton growth occurred with realistic cell concentrations. The flexible tanks (3–4 m³, 4–5 m deep) were exposed in the German Bight at a station in the outer harbour of Helgoland. The concentration changes of dissolved free amino acids (DFAA) were determined. The direct determination method applied permitted an analysis in picomole range without loss and with good reproducibility. The preliminary concentration of DFAA amounted to 0.2 μmol dm⁻³ in all three cultures, increasing during the development of T. rotula to 0.9–1.3 μmol dm⁻³ and decreasing in the stationary phase back again to smaller values. A high degree of temporal variation in DFAA was observed in all three cultures. In spite of these rapid changes in concentration, a good parallel development could be shown for all cultures, which extended as far as the spectra of the amino acids. Relationships between DFAA and other parameters of the culture-systems were examined.     

Atlas of Japan (East) Sea hydrographic properties in summer, 1999

Hydrographic properties from CTD and discrete bottle sample profiles covering the Japan (East) Sea in summer, 1999, are presented in vertical sections, maps at standard depths, maps on isopycnal surfaces, and as property–property distributions. This data set covers most of the Sea with the exception of the western boundary region and northern Tatar Strait, and includes nutrients, pH, alkalinity, and chlorofluorocarbons, as well as the usual temperature, salinity, and oxygen observations.     

Application of wavelet transforms to the decoupling of free-roll decay data

This study presents the results of the decoupling of a free-roll decay test by wavelet transforms. A free-roll decay test was performed to determine the coefficients of damping terms in equations of motion. No motion of the model was restricted during the experiment. A slight yaw motion was found while the model was in the free-roll decay motion. It was necessary to extract a pure roll motion from the experimental data. Wavelet transforms were applied to the signals to extract the pure roll motion. The results were compared to those found through the Fourier transform. Discrete wavelet transforms were able to efficiently decouple the test signals, while the continuous wavelet transform and the Fourier transform could not.     

Effect of native and invasive cordgrass on Macoma petalum density, growth, and isotopic signatures

Ecosystem engineers can influence community and ecosystem dynamics by controlling resources, modifying the flow of energy or biomass, or changing physical characteristics of the habitat. Invasive hybrid cordgrass (Spartina alterniflora × Spartina foliosa) is an ecosystem engineer in salt marshes in San Francisco Bay, California, U.S.A. that raises intertidal elevations and may be either increasing C₄ plant carbon input into food webs or tying up carbon in a form that is not usable by consumers. A manipulative experiment compared abundance, growth, and stable isotope (δ¹³C and δ¹⁵N) composition of the clam Macoma petalum (=M. balthica) among native marsh, hybrid Spartina, and mudflats in central San Francisco Bay. We found higher densities (individuals m⁻²) of M. petalum on mudflats compared to either native or hybrid Spartina (p < 0.001). Macoma petalum shell growth was significantly greater in mudflats than in either vegetation type in 2002 (p = 0.005) but not 2003. Differences in shell growth between native and hybrid Spartina were not significant. Stable isotope results showed differences between habitats in δ¹³C but not δ¹⁵N. Carbon signatures of M. petalum placed in Spartina were much more depleted than the isotopic signature of Spartina. Neither native nor hybrid Spartina appears to be a significant carbon source for M. petalum in San Francisco Bay, and we found no evidence that hybrid Spartina contributes carbon to M. petalum beyond what is provided by S. foliosa, despite the hybrid's much greater biomass. Our results show that loss of mudflat habitat, rather than increased input of C₄ carbon, is the greatest effect of the invasion of hybrid Spartina on M. petalum.     

Carbon balance in a salt marsh: Interactions of diffusive export, tidal deposition and rainfall-caused erosion

Studies of the concentrations of particulate and dissolved organic carbon in the Duplin River, of the tidal exchange of POC and DOC in the marsh, of the standing stock and movement of Spartina alterniflora wrack in the Duplin, and of the removal of carbon from the surface of the marsh by rain were conducted at Sapelo Island, Georgia in order to test three hypotheses about export of carbon from the Duplin River watershed. We found that the gradients in POC and DOC concentrations are such that carbon is being transported down the Duplin River throughout the year, although in smaller quantities than previously believed. In contrast, almost all tidal exchanges within the marsh result in deposition of carbon. Most of this deposited carbon is subsequently eroded as a result of rain falling on the exposed marsh surface, and is washed back into the tidal creeks. This cycle of deposition and erosion is a possible mechanism keeping POC in the thin aerobic surface layer of the marsh, thus increasing its availability to detritivores and aerobic microbes. The standing stock of wrack is only a fraction of the S. alterniflora produced each year, and its export is a negligible term in the carbon balance equation.     

Preliminary attempt to characterize the rotation of seafloor in the Pito Deep area of the Easter Microplate using a submersible magnetometer

Several mechanisms have been proposed to account for the rotation of the nearly north-south abyssal hill fabric formed on the East Pacific Rise north of the Easter Microplate to the nearly east-west trends in the northern microplate interior. Proposed mechanisms include rigid microplate rotation, transform fault – parallel shear, and bookshelf faulting during the transfer of lithosphere from the Nazca Plate to the microplate. We used a submersible magnetometer on a NAUTILE dive program to measure the magnetic vector rotation of a pillow basalt and dike spur near Pito Deep, the present location of the tip of the propagating rift system that created the microplate. Our results, although too limited to draw strong conclusions from, suggest clockwise rotations of the seafloor magnetic vectors inconsistent with the transform-parallel shear model, and larger than can be explained solely by rigid microplate rotation.