An information-based criterion to measure pixel-level thematic uncertainty in land cover classifications

Traditional accuracy assessment of satellite-derived maps relies on a confusion matrix and its associated indices built by comparing ground truth observations and classification outputs at specific locations. These indices may be applied at the map-level or at the class level. However, the spatial variation of the accuracy is not captured by those statistics. Pixel-level thematic uncertainty measures derived from class membership probability vectors can provide such spatially explicit information. In this paper, a new information-based criterion—the equivalent reference probability—is introduced to provide a synoptic thematic uncertainty measure that has the advantage of taking the maximum probability value into account while committing for the full set of probabilities. The fundamental theoretical properties of this indicator was first highlighted and its use was afterwards demonstrated on a real case study in Belgium. Results showed that the proposed approach positively correlates with the quality of the classification and is more sensitive than the classical maximum probability criterion. As this information-based criterion can be used for providing spatially explicit maps of thematic uncertainty quality, it provides substantial additional information regarding classification quality compared to conventional quality measures. Accordingly, it proved to be useful both for end-users and map producers as a way to better understand the nature of the errors and to subsequently improve the map quality.     

Effects of persistent organic pollutants on the thyroid function of the European sea bass (Dicentrarchus labrax) from the Aegean sea, is it an endocrine disruption?

We evaluated the alterations of organochlorinated compounds such as polychlorobiphenyls (PCB), dichloro-diphenyl-dichloroethylene (DDE) and dichloro-diphenyl-trichloroethane (DDT) on the thyroid in wild and cultured sea bass (Dicentrarchus labrax) at environmental concentrations. These compounds influence the endocrine system of many fish species and are qualified as endocrine disruptors. The thyroid seems to be a target organ. Two alteration endpoints: the thyroid histology and the muscular thyroid hormone concentrations, were used simultaneously.High concentrations in PCBs and DDT were detected in muscles, supporting the idea that the Mediterranean fauna could be more polluted than the Atlantic fauna. The high abundance of DDE indicates a progressive degradation of remnant DDT load and the absence of new inputs in this area. Aquaculture sea bass shows a significant higher amount of pollutants on fresh weight basis (especially PCBs) in their muscles compared to the wild sea bass. Those differences may be related mainly to the contaminations of diet.Thyroid parameters vary between wild and aquaculture sea bass, wild sea bass were characterized by higher follicle diameters, epithelial cell heights and muscular T₄ concentrations. A significant relationship between persistent organic pollutants (muscular PCBs and DDT concentration) and the different thyroid parameters (diameters of follicles, epithelial cell heights and muscular T₄ levels) could be observed, which support the hypothesis that these compounds have an adverse impact on thyroid morphometry and function.     

Simulated asteroid materials based on carbonaceous chondrite mineralogies

A set of high‐fidelity simulated asteroid materials, or simulants, was developed based on the mineralogy of carbonaceous chondrite meteorites. Three varieties of simulant were developed based on CI1 chondrites (typified by Orgueil), CM2 chondrites (typified by Murchison), and CR2/3 chondrites (multiple samples). The simulants were designed to replicate the mineralogy and physical properties of the corresponding meteorites and anticipated asteroid surface materials as closely as is reasonably possible for bulk amounts. The simulants can be made in different physical forms ranging from larger cobbles to fine‐grained regolith. We analyzed simulant prototypes using scanning electron microscopy, X‐ray fluorescence, reflectance spectroscopy at ambient conditions and in vacuum, thermal emission spectroscopy in a simulated asteroid environment chamber, and combined thermogravimetry and evolved gas analysis. Most measured properties compare favorably to the reference meteorites and therefore to predicted volatile‐rich asteroid surface materials, including boulders, cobbles, and fine‐grained soils. However, there were also discrepancies, and mistakes were made in the original mineral formulations that will be updated in the future. The asteroid simulants are available to the community from the nonprofit Exolith Lab at UCF, and the mineral recipes are freely published for other groups to reproduce and modify as they see fit.     

Water abundance in the Tagish Lake meteorite from TGA and IR spectroscopy: Evaluation of aqueous alteration

Here, we evaluate the extent of aqueous alteration among five pristine specimens of the ungrouped Tagish Lake carbonaceous chondrite (TL5b, TL11h, TL11i, TL4, and TL10a) using thermogravimetric analysis (TGA) and infrared (IR) transmission spectroscopy. Both TGA and IR spectroscopy have proven to be reliable methods for determining the extent of aqueous alteration among different carbonaceous chondrites, in particular the CM chondrites (e.g., Garenne et al. 2014), with which Tagish Lake shares some affinities. Using these two methods, our goal is to incorporate TL4 and TL10a into the known alteration sequence of TL5b < TL11h < TL11i (Herd et al. 2011; Blinova et al. 2014a). This study highlights the compositional variability of the Tagish Lake specimens, which we ascribe to its brecciated nature. Our TGA and IR spectroscopy results are congruent with the reported alteration sequence, allowing us to introduce the TL4 and TL10a specimens in the following order: TL4 < TL5b ≤ TL10a < TL 11h < TL11i. Notably, these two specimens appear to be similar to the least altered lithologies previously reported, and the alteration of Tagish Lake is similar to that experienced by lesser altered members of the CM chondrites (>CM1.6). Based on these findings, Tagish Lake could be considered a 1.6–2.0 ungrouped carbonaceous chondrite. Visible and near‐IR reflectance measurements of Tagish Lake were also acquired in this study to revisit the Tagish Lake parent body connection. While other studies have paired Tagish Lake with D‐ and T‐type asteroid parent bodies, the reflectance spectra acquired in this study are variable among the different Tagish Lake specimens in relation to their alteration sequences; results match with spectra characteristic of C‐, X‐, Xc‐, and D‐type asteroids. The heterogeneity of Tagish Lake coupled with its low albedo makes the parent body connection a challenge.     

Meteorites from the Lut Desert (Iran)

We present for the first time a detailed report on the discovery of a new meteorite collection region in the Lut Desert, eastern–southeastern Iran, describing its geological, morphological, and climatic setting. Our search campaigns, alongside with the activity of meteorite hunters, yielded >200 meteorite finds. Here, we report on their classification, spatial distribution, and terrestrial weathering. All the collected meteorites are ordinary chondrites (OCs). The most abundant by far are the highly weathered paired H5 distributed in the northwest of Kalut area (central Lut, Kerman dense collection area). The second are well‐preserved paired L5 also found in Kalut region. A detailed study of the geochemistry and mineralogy of selected meteorites reveals significant effects of terrestrial weathering. Fe,Ni metal (hereafter simply metal) and troilite are transformed into Fe oxyhydroxides. A rather unusual type of troilite weathering to pyrite/marcasite is observed in most of the Lut Desert meteorites. Magnetic measurements and X‐ray diffractometry confirm the occurrence of terrestrial weathering products, with the dominance of maghemite, goethite, and hematite. Mobile elements, such as Li, Sr, Mo, Ba, Tl, Th, and U, are enriched with respect to fresh falls. Meanwhile, a decrease in the V, Cr, Co, Rb (and possibly Fe) due to terrestrial weathering is detectable. The total carbon and CaCO₃ is higher than in samples from other hot deserts. The weathering effects observed in the Lut Desert OCs can be used as distinctive indicators to distinguish them from meteorites from other regions of the Earth. Measurements of terrestrial age (¹⁴C) show a range of 10–30 ka, which is in the range of ages reported for meteorites from other hot deserts except the Atacama Desert (Chile). Considering the high potential of the Lut Desert in meteorite preservation, systematic works should lead to the discovery of more samples giving access to interesting material for future studies.     

Modification of REE distribution of ordinary chondrites from Atacama (Chile) and Lut (Iran) hot deserts: Insights into the chemical weathering of meteorites

The behavior of rare earth elements (REEs) during hot desert weathering of meteorites is investigated. Ordinary chondrites (OCs) from Atacama (Chile) and Lut (Iran) deserts show different variations in REE composition during this process. Inductively coupled plasma–mass spectrometry (ICP‐MS) data reveal that hot desert OCs tend to show elevated light REE concentrations, relative to OC falls. Chondrites from Atacama are by far the most enriched in REEs and this enrichment is not necessarily related to their degree of weathering. Positive Ce anomaly of fresh chondrites from Atacama and the successive formation of a negative Ce anomaly with the addition of trivalent REEs are similar to the process reported from Antarctic eucrites. In addition to REEs, Sr and Ba also show different concentrations when comparing OCs from different hot deserts. The stability of Atacama surfaces and the associated old terrestrial ages of meteorites from this region give the samples the necessary time to interact with the terrestrial environment and to be chemically modified. Higher REE contents and LREE‐enriched composition are evidence of contamination by terrestrial soil. Despite their low degrees of weathering, special care must be taken into account while working on the REE composition of Atacama meteorites for cosmochemistry applications. In contrast, chondrites from the Lut desert show lower degrees of REE modification, despite significant weathering signed by Sr content. This is explained by the relatively rapid weathering rate of the meteorites occurring in the Lut desert, which hampers the penetration of terrestrial material by forming voluminous Fe oxide/oxyhydroxides shortly after the meteorite fall.     

Effects of simulated benthic fluxes on phytoplankton dynamic and photosynthetic parameters in a mesocosm experiment (Bay of Brest,France)

Benthic faunal activity and density play an important role in determining the rates of benthic nutrient fluxes, which enrich the water column and contribute to phytoplankton growth. The intensity of nutrient fluxes in the Bay of Brest depends on the density of the invasive gastropod, Crepidula fornicata. In order to study the impact of benthic fluxes on phytoplankton dynamics, realistic daily nutrient inputs simulating various densities of C. fornicata were added to six enclosures during three weeks. The increase in fertilization intensity influenced the phytoplankton biomass. A succession from Chaetoceros spp. to Pseudo-nitzschia spp. and Leptocylindrus danicus was observed in all enclosures, but the dynamics of successions were different. Pseudo-nitzschia spp. was favored in the three more fertilized enclosures, while Chaetoceros spp. persisted longer in less enriched enclosures. Despite an apparent nitrogen limitation, the quantum efficiency of PSII (F_v/F_m) was high (>0.5) and stable in all enclosures. The maximal photosynthetic capacity (P^Bmax) was also invariable and oscillated around an average value of 2.23 mg C (mg Chl a)⁻¹ h⁻¹. The stability of F_v/F_m and P^Bmax observed at different nutrient input intensities demonstrates that the daily inputs maintained the physiological balance of the microalgae. The maximal light utilization efficiency (α) and the light saturation parameter (E_k) were also quite stable after day 8, which reveals that photosynthetic parameters were driven by growth constraints due to nutrient availability and not by incident light or species successions. We suggest that our results correspond to an “E_k independent variation” regulation. We propose that such regulation of photosynthetic parameters appears when there are frequent nutrient additions which do not allow replete nutrient conditions to be reached but lead to physiological equilibrium.     

Methane sources,sinks and fluxes in a temperate tidal Lagoon: The Arcachon lagoon (SW France)

The Arcachon lagoon is a 156 km² temperate mesotidal lagoon dominated by tidal flats (66% of the surface area). The methane (CH₄) sources, sinks and fluxes were estimated from water and pore water concentrations, from chamber flux measurements at the sediment–air (low tide), sediment–water and water–air (high tide) interfaces, and from potential oxidation and production rate measurements in sediments. CH₄ concentrations in waters were maximal (500–1000 nmol l⁻¹) in river waters and in tidal creeks at low tide, and minimal in the lagoon at high tide (<50 nmol l⁻¹). The major CH₄ sources are continental waters and the tidal pumping of sediment pore waters at low tide. Methanogenesis occurred in the tidal flat sediments, in which pore water concentrations were relatively high (2.5–8.0 μmol l⁻¹). Nevertheless, the sediment was a minor CH₄ source for the water column and the atmosphere because of a high degree of anaerobic and aerobic CH₄ oxidation in sediments. Atmospheric CH₄ fluxes at high and low tide were low compared to freshwater wetlands. Temperate tidal lagoons appear to be very minor contributor of CH₄ to global atmosphere and to open ocean.     

Phytoplankton community adaptation to changing light levels in the southern Beaufort Sea,Canadian Arctic

The chlorophyll a specific absorption coefficient of phytoplankton, a_φ^∗(λ) is an important parameter to determine for primary production models and for the estimation of phytoplankton physiological condition. Knowledge of this parameter at high latitudes where nutrient rich cold water submitted to low incident light is a common environment is almost nonexistent. To address this issue, we investigated the light absorption properties of phytoplankton as a function of irradiance, temperature, and nutrients using a large data set in the southern Beaufort Sea during the open water to ice cover transition period. The a_φ^∗(λ) tended to increase from autumn when open water still existed to early winter when sea ice cover was formed, resulting from a biological selection of smaller-size phytoplankton more efficient to absorb light. There was no significant correlation between a_φ^∗(λ) and irradiance or temperature for both seasons. However, a_φ^∗(λ) showed a significant positive correlation with NO₃ + NO₂. Implications of the results for phytoplankton community adaptation to changing light levels are discussed.     

Numerical modeling of bedload and suspended load contributions to morphological evolution of the Seine Estuary (France)

This numerical modeling study (i) assesses the influence of the sediment erosion process on the sediment dynamics and subsequent morphological changes of a mixed-sediment environment, the macrotidal Seine estuary, when non-cohesive particles are dominant within bed mixtures (non-cohesive regime), and (ii) investigates respective contributions of bedload and suspended load in these dynamics. A three dimensional (3D) process-based morphodynamic model was set up and run under realistic forcings (including tide, waves, wind, and river discharge) during a 1-year period. Applying erosion homogeneously to bed sediment in the non-cohesive regime, i.e., average erosion parameters in the erosion law (especially the erodibility parameter, E₀), leads to higher resuspension of fine sediment due to the presence of coarser fractions within mixtures, compared to the case of an independent treatment of erosion for each sediment class. This results in more pronounced horizontal sediment flux (two-fold increase for sand, +30% for mud) and erosion/deposition patterns (up to a two-fold increase in erosion over shoals, generally associated with some coarsening of bed sediment). Compared to observed bathymetric changes, more relevant erosion/deposition patterns are derived from the model when independent resuspension fluxes are considered in the non-cohesive regime. These results suggest that this kind of approach may be more relevant when local grain-size distributions become heterogeneous and multimodal for non-cohesive particles. Bedload transport appears to be a non-dominant but significant contributor to the sediment dynamics of the Seine Estuary mouth. The residual bedload flux represents, on average, between 17 and 38% of the suspended sand flux, its contribution generally increasing when bed sediment becomes coarser (can become dominant at specific locations). The average orientation of residual fluxes and erosion/deposition patterns caused by bedload generally follow those resulting from suspended sediment dynamics. Sediment mass budgets cumulated over the simulated year reveal a relative contribution of bedload to total mass budgets around 25% over large erosion areas of shoals, which can even become higher in sedimentation zones. However, bedload-induced dynamics can locally differ from the dynamics related to suspended load, resulting in specific residual transport, erosion/deposition patterns, and changes in seabed nature.