Estimating the underwater light field from remote sensing of ocean color

We present a new approach that incorporates two models to estimate the underwater light field from remote sensing of ocean color. The first employs a series of analytical, semi-analytical, and empirical algorithms to retrieve the spectrum of inherent optical properties (IOPs), including the absorption and the backscatter coefficients, from the spectrum of remote sensing reflectance. The second model computes the profile of photosynthetically available radiation E _0,PAR (z) for a vertically homogeneous water column using the information of the retrieved IOPs and the ambient optical environment. This computation is based on an improved look-up table technology that possesses high accuracy, comparable with the full solution of the radiative transfer equation, and meets the computational requirement of remote sensing application. This new approach was validated by in situ measurements and an extensive model-to-model comparison with a wide range of IOPs. We successfully mapped the compensation depth by applying this new approach to process the SeaWiFS imagery. This research suggests that E _0,PAR (z) can be obtained routinely from ocean-color data and may have significant implications for the estimation of global heat and carbon budget.     

Steepness and spectrum of a nonlinearly deformed wave on shallow waters

The process of nonlinear deformation of a surface wave on shallow waters is investigated. The main attention is given to the relationship between the wave Fourier spectrum and the steepness of wave front slope. It is shown that an unambiguous relationship couples these quantities in the case of an initially sinusoidal wave, which allows estimation of the spectral composition of the wave field from the observed wave steepness.     

Thorium isotopes as tracers of particles dynamics and deep water circulation in the Indian sector of the Southern Ocean (ANTARES IV)

Dissolved and particulate samples were collected to study the distribution of thorium isotopes (²³⁴Th, ²³²Th and ²³⁰Th) in the water column of the Indian sector of the Southern Ocean (from 42°S to 47°S and from 60°E to 66°E, north of the Polar Front) during Austral summer 1999. Vertical profiles of excess ²³⁰Th (²³⁰Th_xs) increases linearly with depth in surface water (0–100 m) and a model was applied to estimate a residence time relative to the thorium scavenging (τ_scav). Low τ_scav in the Polar Front Zone (PFZ) are found, compared to those estimated in the Subtropical Front Zone (STZ). Changes in particle composition between the PFZ and STZ could influence the ²³⁰Th_xs scavenging efficiency and explain this difference. An innovative coupling between ²³⁴Th and ²³⁰Th_xs was then used to simultaneously constrain the settling velocities of small (0.6–60 μm) and large (above 60 μm) particles. Although the different hydrological and biogeochemical regimes visited during the ANTARES IV cruise did not explain the spatial variation of sinking velocity estimates, our results indicate that less particles may reach the seafloor north (60 ± 2 m d^− 1, station 8) than south of the Agulhas Return Current (119 ± 23 and 130 ± 5 m d^− 1 at stations 3 and 7, respectively). This information is essential for understanding particle transport and by extension, carbon export. In the deep water column, the ²³⁰Th_xs concentrations did not increase linearly with depth, probably due to lateral transport of North Atlantic Deep Water (NADW) from the Atlantic to the Indian sector, which renews the deep waters and decreases the ²³⁰Th_xs concentrations. A specific ²³⁰Th_xs transport model is applied in the deep water column and allows us to assess a “travel time” of NADW ranging from 2 to 15 years.     

Development of two novel CYP-antibodies and their use in a PCB exposure experiment with Mytilus edulis

In an attempt to learn more about the cytochrome P450 (CYP) system of mussels, we used protein databases and alignment software to extract highly conserved CYP sequences. From these alignments synthetic peptides were produced and used for rabbit immunisation, which yielded polyclonal antibodies against the CYP families 2 and 4. The antibodies were evaluated with Western Blot and ELISA assays, using digestive gland microsomal samples from the mussel Mytilus edulis. Western Blots revealed immunoreactions for both antibodies. The anti-CYP2 sequence rendered one major immunopositive protein of approximately 49 kDa size, and weak signals for proteins of approximately 41 and 56 kDa size. The anti-CYP4 sequence rendered two major bands of approximately 56 and 59 kDa size, and also a weak immunoreaction with a protein of approximately 43 kDa size. ELISA rendered only weak signals even with a 1:50 dilution of IgG-purified serum. A 10-day exposure to Aroclor 1254 did not appear to affect any of the immunopositive proteins, while total PCBs in soft bodies increased from 14-40 ng/g DW in controls to 373-638 ng/g DW in exposed mussels.     

Wind-driven interannual variability over the northeast Pacific Ocean

Interannual variability of the sea surface height (SSH) over the northeast Pacific Ocean is hindcast with a reduced-gravity, quasi-geostrophic model that includes linear damping. The model is forced with monthly Ekman pumping fields derived from the NCEP reanalysis wind stresses. The numerical solution is compared with SSH observations derived from satellite altimeter data and gridded at a lateral resolution of 1 degree. Provided that the reduced gravity parameter is chosen appropriately, the results demonstrate that the model has significant hindcast skill over interior regions of the basin, away from continental boundaries. A damping time scale of 2 to 3 years is close to optimal, although the hindcast skill is not strongly dependent on this parameter.A simplification of the quasi-geostrophic model is considered in which Rossby waves are eliminated, yielding a Markov model driven by local Ekman pumping. The results approximately reproduce the hindcast skill of the more complete quasi-geostrophic model and indicate that the interannual SSH variability is dominated by the local response to wind forcing. There is a close correspondence the two leading empirical orthogonal modes of the local model and those of the observed SSH anomalies. The latter account for over half of the variance of the interannual signal over the region.     

Artificial upwelling induced by ocean currents —Theory and experiment

A submerged apparatus, which consists of a buoy, several horizontal contraction and expansion tubes (Venturi-type tubes) and a long pipe, is expected to be used to pump the subsurface sea-water (200–300 meter depth) containing abundant nutrients to surface layer (50–100 m) by the dynamic of ocean currents. i.e. an artificial upwelling without energy cost. A preliminary experiment and analysis are undertaken and shows that the capacity of pumping the nutrient-rich sea-water is worth to build a pilot prototype model.     

Ridge development as revealed by sub-bottom profiles on the central New Jersey shelf

Closely-spaced 3.5 kHz seismic profiles were collected over the north-easterly trending ridge and swale system 50 km east-southeast of Atlantic City, New Jersey. They yield information on the Late Quaternary depositional history of the area, and on the origin of the ridge system. Four of the sub-bottom reflectors identified were sufficiently persistent to warrant investigation and interpretation. These reflectors, which have been cored, lithologically identified, and radiocarbon dated, are stratigraphically higher than the reflectors dealt with by the majority of previous studies. The upper three reflectors are definitely mid- and post-Wisconsin in age and present a record of the most recent glacial cycle. The upper three units associated with the observed reflectors appear to exert a pronounced influence on the bathymetry. The gently corrugated ridge system of Holocene sand is formed over the regionally flat-lying upper unit, an Early Holocene lagoonal silty clay. The characteristically flat, broad depressions of the area are floored by this lagoonal material. Locally, however, marine scour has cut through the silty clay into an underlying unit of unconsolidated fine Pleistocene sand. Several stages of trough development appear to be represented. After penetrating the lagoonal clay, troughs are initially narrow, but when incised through the sand into a lower, Pleistocene, silty-clay unit, the troughs become notably wider. As downcutting is inhibited by the lower clay, the upper clay is undercut as the trough widens in a fashion similar to a desert blowout.

The sub-bottom reflectors indicate that ridge development on the central shelf has involved aggradation as well as erosion. Some ridges seem to have grown by vertical and lateral accretion from small cores. The internal structure of other ridges suggests that they formed by the coalescence of several small ridges. Others appear to have undergone appreciable lateral migration.

The ridges appear to be in a state of continuing adjustment to the hydraulic regime of the deepening post-Pleistocene water column.     

Variations of antioxidant efficiency and presence of endosymbiotic diatoms in the Antarctic porifera Haliclona dancoi

The role of endosymbiotic diatoms as pro-oxidant stressors in porifera has been investigated in the Antarctic sponge Haliclona dancoi in which the presence of diatoms is influenced by marked seasonal variations during the austral summer. Both chlorophaeopigments and frustules were absent in sponge tissues sampled in early November at the beginning of the summer and increased from the mid of December with slightly shifted temporal trends. The efficiency of antioxidant defenses in the sponge showed a marked response to symbionts with clearly enhanced values corresponding to the peak of diatoms.     

Community structure and dynamics of deep-water decapod assemblages from Le Danois Bank (Cantabrian Sea, NE Atlantic): Influence of environmental variables and food availability

The community structure of the decapod crustaceans inhabiting Le Danois Bank (Cantabrian Sea, NE Atlantic Ocean) was studied on two cruises performed in October 2003 and April 2004. Otter and beam-trawls were used to collect this fauna. At depths ranging between 455 and 1048 m, we found distinct decapod assemblages on the bank summit and deeper in the inner basin (between the bank and the continental shelf). The faunal discontinuity between these groups appeared at around 600 m (e.g. between 612 and 642 m in the basis of species replacement). The summit assemblage was characterized by low diversity (in terms of number and relative abundances of species) and by the dominance of hermit crabs (Pagurus alatus, Anapagurus laevis, Pagurus excavatus), the crangonid Pontophilus spinosus and the squat lobster Munida sarsi. Species characterizing the deeper assemblage, which was richer in terms of diversity, were Munida tenuimana, Parapagurus pilosimanus, Pontophilus norvegicus, the crab Geryon trispinosus and a number of bathypelagic shrimps (Sergia robusta, Acanthephyra pelagica and Pasiphaea tarda). Changes in decapod composition characterized by multidimensional scaling analyses were correlated with different variables, e.g. %mud and %organic matter (OM), temperature and salinity close to the bottom. Among those the %OM and %mud in sediments affected decapod distributions the most. The summit of the bank was covered by fine sediments with low proportion of mud (13.9–29.3%) and OM (2.55–3.50%). By contrast, sediment of the inner basin had a higher proportion of OM and mud (64.1–84.2%; 6.26–7.00%, respectively). The low proportion of mud at the summit of Le Danois Bank may explain the absence or scarcity of burrowing species (e.g. the lobster Nephrops norvegicus, the shrimps Calocaris macandreae and Alpheus glaber and the crab Goneplax rhomboides), that are dominant at similar depths (400–500 m) in the upper muddy assemblage on the mainland-continental slope in the Bay of Biscay (44–46°N). The dominance of certain species on the summit of submarine mounts can probably be related to their biology and feeding ecology. For example, pagurids are deposit feeders, even consuming marine snow (e.g. Chl-a identified in guts of Pagurus alatus), and they have low gut fullness (probably indicating a capacity to withstand long periods under starvation), that would favour their adaptability to a rather unpredictable habitat such as Le Danois Bank summit. Regarding prey availability, zooplankton/micronekton and infauna distributed around Le Danois Bank showed different depth-related patterns. Among zooplankton, mesopelagic decapods, mysids, and fishes were absent at the bank summit, while euphausiids exhibited high abundances over the summit. No significant trends with depth were found for infauna abundance, and for instance polychaete densities were similar both at the summit and the inner basin. Therefore, prey availability was lower for summit assemblages regarding zooplankton/micronekton. Patterns in mean size vs. depth were species specific for decapods, and the possible role of the bank summit as a recruitment area was not general for the whole decapod assemblage.