Microbial responses using denaturing gradient gel electrophoresis to oil and chemical dispersant in enclosed ecosystems

Microbial responses to the addition of oil with or without a chemical dispersant were examined in mesocosm and microcosm experiments by using denaturing gradient gel electrophoresis of bacterial ribosomal DNA and direct cell counting. When a water-soluble fraction of oil was added to seawater, increases in cell density were observed in the first 24h, followed by a decrease in abundance and a change in bacterial species composition. After addition of an oil-dispersant mixture, increases in cell density and changes in community structure coincided, and the amount of bacteria remained high. These phenomena also occurred in response to addition of only dispersant. Our results suggest that the chemical dispersant may be used as a nutrient source by some bacterial groups and may directly or indirectly prevent the growth of other bacterial groups.     

Assessing the potential impact of climate change on the UK’s electricity network

We investigate how weather affects the UK’s electricity network, by examining past data of weather-related faults on the transmission and distribution networks. By formalising the current relationship between weather-related faults and weather, we use climate projections from a regional climate model (RCM) to quantitatively assess how the frequency of these faults may change in the future. This study found that the incidences of both lightning and solar heat faults are projected to increase in the future. There is evidence that the conditions that cause flooding faults may increase in the future, but a reduction cannot be ruled out. Due to the uncertainty associated with future wind projections, there is no clear signal associated with the future frequency of wind and gale faults, however snow, sleet and blizzard faults are projected to decrease due to a reduction in the number of snow days.     

Measurement of methane flux over an evergreen coniferous forest canopy using a relaxed eddy accumulation system with tuneable diode laser spectroscopy detection

Very few studies have conducted long-term observations of methane (CH₄) flux over forest canopies. In this study, we continuously measured CH₄ fluxes over an evergreen coniferous (Japanese cypress) forest canopy throughout 1?year, using a micrometeorological relaxed eddy accumulation (REA) system with tuneable diode laser spectroscopy (TDLS) detection. The Japanese cypress forest, which is a common forest type in warm-temperate Asian monsoon regions with a wet summer, switched seasonally between a sink and source of CH₄ probably because of competition by methanogens and methanotrophs, which are both influenced by soil conditions (e.g., soil temperature and soil moisture). At hourly to daily timescales, the CH₄ fluxes were sensitive to rainfall, probably because CH₄ emission increased and/or absorption decreased during and after rainfall. The observed canopy-scale fluxes showed complex behaviours beyond those expected from previous plot-scale measurements and the CH₄ fluxes changed from sink to source and vice versa.     

Crustal partial melting on Vesta: Evidence from highly metamorphosed eucrites

We have performed a mineralogical and geochemical study of eight metamorphosed basaltic eucrites. These are classified into granulitic eucrites and type 4–7 eucrites on the basis of their textures and pyroxene mineralogy, and display mineralogical evidence for high temperature metamorphism, including partial melting. In particular, rare earth element (REE) patterns of a number of the eucrites studied show varying degrees of light REE depletion due to partial melting, with subsequent melt extraction. A simple correlation between metamorphic grade, as deduced from pyroxene mineralogy, and the degree of light REE depletion was not detected. This can be explained by the fact that homogenization, exsolution and inversion of pigeonite would have required prolonged heating at moderate temperatures (800–1000 °C), whereas partial melting would have taken place over a short time interval where temperatures exceeded that of the solidus. The eucrites studied therefore record a two stage thermal regime consisting of short, high temperature reheating events superimposed on long duration global crustal metamorphism. The short reheating events may have been caused by impact events and/or intrusions of hot magmas. The results of this study demonstrate that the thermal history of eucritic crust was more complex than can be explained by a simple burial model alone. In particular, the origin of Stannern trend eucrites requires contamination of Main-Group magmas by partial melts extracted from residual eucrites.     

Photometric,spectral phase and temperature effects on 4 Vesta and HED meteorites: Implications for the Dawn mission

Phase angle and temperature are two important parameters that affect the photometric and spectral behavior of planetary surfaces in telescopic and spacecraft data. We have derived photometric and spectral phase functions for the Asteroid 4 Vesta, the first target of the Dawn mission, using ground-based telescopes operating at visible and near-infrared wavelengths (0.4–2.5 μm). Photometric lightcurve observations of Vesta were conducted on 15 nights at a phase angle range of 3.8–25.7° using duplicates of the seven narrowband Dawn Framing Camera filters (0.4–1.0 μm). Rotationally resolved visible (0.4–0.7 μm) and near-IR spectral observations (0.7–2.5 μm) were obtained on four nights over a similar phase angle range. Our Vesta photometric observations suggest the phase slope is between 0.019 and 0.029 mag/deg. The G parameter ranges from 0.22 to 0.37 consistent with previous results (e.g., Lagerkvist, C.-I., Magnusson, P., Williams, I.P., Buontempo, M.E., Argyle, R.W., Morrison, L.V. [1992]. Astron. Astrophys. Suppl. Ser. 94, 43–71; Piironen, J., Magnusson, P., Lagerkvist, C.-I., Williams, I.P., Buontempo, M.E., Morrison, L.V. [1997]. Astron. Astrophys. Suppl. Ser. 121, 489–497; Hasegawa, S. et al. [2009]. Lunar Planet. Sci. 40. ID 1503) within the uncertainty. We found that in the phase angle range of 0° < α ? 25° for every 10° increase in phase angle Vesta’s visible slope (0.5–0.7 μm) increases 20%, Band I and Band II depths increase 2.35% and 1.5% respectively, and the BAR value increase 0.30. Phase angle spectral measurements of the eucrite Moama in the lab show a decrease in Band I and Band II depths and BAR from the lowest phase angle 13° to 30°, followed by possible small increases up to 90°, and then a dramatic drop between 90° and 120° phase angle. Temperature-induced spectral effects shift the Band I and II centers of the pyroxene bands to longer wavelengths with increasing temperature. We have derived new correction equations using a temperature series (80–400 K) of HED meteorite spectra that will enable interpretation of telescopic and spacecraft spectral data using laboratory calibrations at room temperature (300 K).     

N-body simulation for self-gravitating collisional systems with a new SIMD instruction set extension to the x86 architecture, Advanced Vector eXtensions

We present a high-performance N-body code for self-gravitating collisional systems accelerated with the aid of a new SIMD instruction set extension of the x86 architecture: Advanced Vector eXtensions (AVX), an enhanced version of the Streaming SIMD Extensions (SSE). With one processor core of Intel Core i7-2600 processor (8 MB cache and 3.40 GHz) based on Sandy Bridge micro-architecture, we implemented a fourth-order Hermite scheme with individual timestep scheme (Makino and Aarseth, 1992), and achieved the performance of ∼20 giga floating point number operations per second (GFLOPS) for double-precision accuracy, which is two times and five times higher than that of the previously developed code implemented with the SSE instructions (Nitadori et al., 2006b), and that of a code implemented without any explicit use of SIMD instructions with the same processor core, respectively. We have parallelized the code by using so-called NINJA scheme (Nitadori et al., 2006a), and achieved ∼90 GFLOPS for a system containing more than N = 8192 particles with 8 MPI processes on four cores. We expect to achieve about 10 tera FLOPS (TFLOPS) for a self-gravitating collisional system with N ∼ 10⁵ on massively parallel systems with at most 800 cores with Sandy Bridge micro-architecture. This performance will be comparable to that of Graphic Processing Unit (GPU) cluster systems, such as the one with about 200 Tesla C1070 GPUs (Spurzem et al., 2010). This paper offers an alternative to collisional N-body simulations with GRAPEs and GPUs.     

Sediment organic matter source estimation and ecological classification in the semi-enclosed Batan Bay Estuary,Philippines

The large organic matter flow in tropical coastal areas is recognized as an important process in the global carbon(C)cycle.However,the nature of organic matter flow in semi-enclosed tropical estuaries remains unclear due to the various environmental processes(tidal change,river flow,waves from the sea,and internal circulation)and organic matter sources therein.Thus,sediment organic matter(SOM)sources,and their distribution pattern,are key to understanding ecosystem material flow.Our research in the Batan Bay Estuary,Philippines,a semi-enclosed estuary under large mangrove deforestation,was conducted to determine ecosystem properties through analysis of C and nitrogen stable isotope ratios and environmental factors.First,we determined that mangrove litter,microphytobenthos,and phytoplankton are the main SOM sources in the Batan Bay Estuary.Second,the estuary was classified into three ecological zones(the Bay zone,Back-barrier zone,and River zone).In addition,we estimated SOM source ratios using the Stable Isotope Analysis in R package and determined different organic matter sources in different zone.The high ratios of mangrove litter as SOM indicate that a large amount of terrestrial plant organic matter remains despite the heavy mangrove deforestation that has occurred since the 1980s,and that the Back-barrier zone consists of a different type of ecosystem that promotes accumulation of C from mangrove litter and microphytobenthos.     

Slab-fluid metasomatism in the Early Paleozoic forearc mantle deduced from the Motai serpentinites,South Kitakami Belt,northeast Japan

The present study examines the petrology and geochemistry of the Early Paleozoic Motai serpentinites, the South Kitakami Belt, northeast Japan, to reveal the subduction processes and tectonics in the convergent margin of the Early Paleozoic proto-East Asian continent. Protoliths of the serpentinites are estimated to be harzburgite to dunite based on the observed amounts of bastite (orthopyroxene pseudomorph). Relic chromian spinel Cr# [=Cr/(Cr + Al)] increases with decreasing amount of bastite. The compositional range of chromian spinel is similar to that found in the Mariana forearc serpentinites. This fact suggests that the protoliths of the serpentinites are depleted mantle peridotites developed beneath the forearc regions of a subduction zone. The Motai serpentinites are divided into two types, namely, Types 1 and 2 serpentinites; the former are characterized by fine-grained antigorite and lack of olivine, and the latter have coarse-grained antigorite and inclusion-rich olivine. Ca-amphibole occurs as isolated crystals or vein-like aggregates in the Type 1 serpentinites and as needle-shaped minerals in the Type 2 serpentinites. Ca-amphibole of the Type 1 serpentinites is more enriched in LILEs and LREEs, suggesting the influence of hydrous fluids derived from slabs. By contrast, the mineral assemblage, mineral chemistry, and field distribution of the Type 2 serpentinites reflect the thermal effect of contact metamorphism by Cretaceous granite. The Ca-amphibole of the Type 1 serpentinites is different from that of the Hayachine–Miyamori Ophiolite in terms of origin; the latter was formed by the infiltration of melts produced in an Early Paleozoic arc–backarc system. Chemical characteristics of the Ca-amphibole in the ultramafic rocks in the South Kitakami Belt reflect the tectonics of an Early Paleozoic mantle wedge, and the formation of the Motai metamorphic rocks in the forearc region of the Hayachine–Miyamori subduction zone system, which occurred at the Early Paleozoic proto-East Asian continental margin.     

Crystallization of cosmic dust from highly supersaturated silicate vapor in a rapidly cooled environment

Growth conditions and the resultant morphology of cosmic forsterite and enstatite particles condensed from the vapor were investigated experimentally as a function of growth temperature and supersaturation using flash-heating by CO₂ laser irradiation. Forsterite particles grew dominantly, followed by a few pyroxenes. No silica minerals were observed. The forsterite morphology changed systematically depending on the temperature (T) and the vapor supersaturation (σ). As the temperature decreased and the vapor supersaturation increased, the forsterite morphology changed from a bulky type (T=1000-1450 °C, σ<97) to a platy type (T=700-1000 °C, σ=97-161), then to a columnar needle shape (T=500-820 °C, σ=131-230), and finally to a droplet type (T<500 °C, σ>230). Very thin polygonal growth steps, which suggest vapor-solid (VS) growth, were detected on the surface of the faceted bulky and platy forsterite particles. Transmission electron microscopic (TEM) observation showed that the tip of the columnar and needle-shaped forsterite was covered with an amorphous layer. This amorphous coverage illustrates that a liquid phase can be condensed from the vapor, even under the stable conditions where crystalline forsterite is stable. This amorphous layer plays a role in the vapor-liquid-solid (VLS) mechanism of the forsterite particles. The difference in the growth mechanism as a function of vapor supersaturation and temperature can be explained by metastable liquid condensation. The experimentally synthesized coexisting patterns of VS-grown and VLS-grown olivine particles resemble the pattern of matrix olivine or chondrule rims in primitive meteorites. Forsterite can crystallize more easily than either pyroxene or silica minerals, which is consistent with the dominance of forsterite in cometary dust particles, as suggested by its infrared spectrum.