Seasonal variations of dissolved organic matter and nutrients in sediment pore water in the inner part of Tokyo Bay

At four stations in Tokyo Bay, pore water profiles of dissolved organic carbon (DOC), nitrogen (DON), phosphorus (DOP), and inorganic nutrients were determined at 3-month intervals over 6 years. Concentrations of dissolved organic matter (DOM) and nutrients were significantly higher in pore waters than in the overlying waters. Pore water DOC, DON, and DOP concentrations in the upper most sediment layer (0–1 cm) ranged from 246 to 888 μM, from 14.6 to 75.9 μM, and from 0.02 to 9.83 μM, respectively. Concentrations of DOM and nutrients in pore waters occasionally showed clear seasonal trends and were highest in the summer and lowest in the winter. The seasonal trends in the pore water DOM concentrations were coupled with trends in the overlying water temperature and dissolved oxygen concentration. Benthic effluxes of DON and DOP were low compared with those of inorganic nutrients, accounting for only 1.0 and 1.5 % of the total benthic effluxes of nitrogen and phosphorus, respectively; thus benthic DOM fluxes were quantitatively insignificant to the inorganic nutrient fluxes in Tokyo Bay. The DOM fluxes represented about 7, 3, and 10 % of the riverine discharge of DOC, DON, and DOP to Tokyo Bay, respectively.     

Identification of aryl hydrocarbon receptor 2 in aquatic birds; cDNA cloning of AHR1 and AHR2 and characteristics of their amino acid sequences

The toxic effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) and its related planar halogenated aromatic hydrocarbons (PHAHs) are mediated by the aryl hydrocarbon receptor (AHR). To investigate the potential sensitivity to PHAHs and the evolutional diversity of AHR in aquatic birds, AHR cDNAs were initially cloned and sequenced from the livers of a black-footed albatross (Diomedea nigripes) and a common cormorant (Phalacrocorax carbo). In this study, we report the identification of two distinct AHR paralog genes in these species. The two full-length AHR cDNAs from albatross were highly divergent (33% overall amino acid identity, and 60% identity in the N-terminal half). Phylogenetic analysis showed that one of them belongs to the AHR1 clade and the other one to the AHR2 clade, which has been identified only from fishes, but not yet from mammals and birds. Albatross AHR1 encoded a 861-residue protein with a predicted molecular mass of 96.7 kDa, and in the case of albatross AHR2, 925 amino acids and 100.7 kDa. From cormorant liver, the full-length AHR1 cDNA and the partial AHR2 cDNA were cloned. This result strongly suggests that bird species also possess two distinct AHR genes (AHR1 and AHR2). To our knowledge, this is the first report on the presence of an AHR2-like isoform in bird species as well as in fish.     

C-isotope stratigraphy and paleoenvironmental changes across OAE2 (mid-Cretaceous) from shallow-water platform carbonates of southern Mexico

The stratigraphic and geochemical record of the mid-Cretaceous (Cenomanian–Turonian) Oceanic Anoxic Event 2 (OAE2) has been studied in numerous Tethyan and proto-Atlantic hemi-pelagic/pelagic successions, but little data comes from nearshore carbonate successions from the proto-Pacific region. Here we present the results of a combined stratigraphic and δ¹³C study of C–T platform carbonates from southern Mexico, which were deposited within the proto-Pacific. Two scales of sedimentary cyclicity are recognized. High-frequency peritidal and subtidal cycles (0.4–8 m) display little evidence of cycle-capping subaerial exposure and are not correlative between sections; these relationships suggest that the amplitudes of high-frequency sea-level changes were minimal during the peak mid-Cretaceous greenhouse. Longer-term transgressive-regressive sequences (18–40⁺ m) are correlated between sections, and using δ¹³C trends, can be correlated with sequences developed in northern Europe and India.The Mexican successions were sampled at a high resolution (~ 10 ky) for stable isotopes (inorganic, organic carbon and oxygen), total organic carbon, insoluble residues, and trace metals. The δ¹³C_carb curve matches global trends (including 6 distinct isotopic stages) permitting identification of OAE2 despite the lack of characteristic anoxic facies. Using the δ¹³C_carb trends, we tie the previously identified ammonite, planktonic foram, and nannofossil biostratigraphy from England and the Western Interior seaway of Colorado into the Mexican sections. The initiation of OAE2, defined by an abrupt positive 3–4‰ δ¹³C shift, coincides with a long-term sea-level rise, though the sedimentary expression of the deepening is no greater than that observed for any of the other sea-level events across the studied interval. OAE2 termination (transition from gradually decreasing to background δ¹³C values) is not associated with a particular sea-level trend. Stratigraphic changes in insoluble residues (proxy for continental sediment discharge) across OAE2 are not correlative between sections and do not show consistent systematic relationships with δ¹³C or sea-level variations, therefore do not support the hypothesis that OAE2 was associated with increased continental-derived nutrient influx. Two peaks in trace metal concentrations coincide with the abrupt increase in δ¹³C ratios (onset of OAE2) and during the transition from elevated-to-decreasing δ¹³C values (near the C–T stage boundary). These trends are similar to those recorded in coeval deposits of the Western Interior seaway, and are consistent with the hypothesis that OAE2 development was related to the release of reduced metals during the short-lived (< 1 My) Caribbean oceanic plateau basalt eruption. In this scenario, oxidation of the metals depleted the existing low dissolved-O₂ concentrations and thermally-buoyant plumes of seawater enriched in biolimiting elements mixed with surface waters, stimulated primary productivity, and further reduced O₂ concentrations leading to widespread anoxia and a large positive δ¹³C shift.     

Influence of Surface-Based Stable Layer Development on Asian Dust Behaviour Over Tokyo

The relationship between local meteorological fields and the behaviour of airborne Asian dust that arrived in the Tokyo metropolitan area on 1 April 2007 with the passage of a synoptic-scale cold front has been investigated through Doppler lidar observations, experiments using a regional atmospheric numerical model, and analyses of surface and upper-air meteorological observations. Results of the Doppler lidar observations showed that the Asian dust passed above the metropolitan area with strong south-westerly winds with speeds of 15–26 m s⁻¹. Meteorological fields reproduced by the numerical experiments showed the development of a surface-based stable layer in the metropolitan area caused by nocturnal radiational cooling near the ground surface and south-westerly warm air advection at upper levels. The blocking effect of the mountainous region located to the west of the metropolitan area induced an area of stagnant air inside the metropolitan area and promoted the stable layer development. Although strong downdrafts prevailed in the upper air, the airborne Asian dust did not spread to the ground when the stable layer was formed. These results strongly indicate that the developed stable layer prevented strong downdrafts from spreading to the ground, acting as an obstacle to the transport of the Asian dust particles from the upper air towards the ground. This is considered to be one of the main causes of the low appearance frequency of Asian dust phenomena near the ground in the Tokyo metropolitan area and eastern Japan.     

Lower mantle diamonds from Rio Soriso (Juina area,Mato Grosso,Brazil)

The morphology, colour, fluorescence, cathodoluminescence, nitrogen content and aggregation state, internal structure and mineral inclusions have been studied for 69 alluvial diamonds from the Rio Soriso (Juina area, Mato Grosso State, Brazil). Nitrogen in most diamonds (53%) is fully aggregated as B centres, but there is also a large proportion of N-free stones (38%). A strong positive correlation between nitrogen and IR-active hydrogen concentrations is observed. The diamonds contain (in order of decreasing abundance) ferropericlase, CaSi-perovskite, magnetite, MgSi-perovskite, pyrrhotite, olivine, SiO₂, perovskite, tetragonal almandine-pyrope phase and some other minerals represented by single grains. The Rio Soriso diamond suite is subdivided into several subpopulations that originated in upper and lower mantle of ultramafic and mafic compositions, with the largest subgroup forming in the ultramafic lower mantle. Analysed ferropericlase grains are enriched in Fe (Mg#=0.43–0.89), which is ascribed to their origin in the lowermost mantle. The Juina kimberlites may be unique in sampling the material from depths below 1,700 km that ascended in a plume formed at the core–mantle boundary.Electronic Supplementary Material  Supplementary material is available for this article at

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Aeolian dust experiment on climate impact: An overview of Japan–China joint project ADEC

The Aeolian Dust Experiment on Climate Impact (ADEC) was initiated in April 2000 as a joint five-year Japan–China project. The goal was to understand the impact of aeolian dust on climate via radiative forcing (RF). Field experiments and numerical simulations were conducted from the source regions in northwestern China to the downwind region in Japan in order to understand wind erosion processes temporal and spatial distribution of dust during their long-range transportation chemical, physical, and optical properties of dust and the direct effect of radiative forcing due to dust. For this, three intensive observation periods (IOP) were conducted from April 2002 to April 2004.The in situ and network observation results are summarized as follows: (1) In situ observations of the wind erosion process revealed that the vertical profile of moving sand has a clear size dependency with height and saltation flux and that threshold wind velocity is dependent on soil moisture. Results also demonstrated that saltation flux is strongly dependent on the parent soil size distribution of the desert surface. (2) Both lidar observations and model simulations revealed a multiple dust layer in East Asia. A numerical simulation of a chemical transport model, CFORS, illustrated the elevated dust layer from the Taklimakan Desert and the lower dust layer from the Gobi Desert. The global-scale dust model, MASINGAR, also simulated the dust layer in the middle to upper free troposphere in East Asia, which originated from North Africa and the Middle East during a dust storm in March 2003. Raman lidar observations at Tsukuba, Japan, found the ice cloud associated with the dust layer at an altitude of 6 to 9 km. Analysis from lidar and the radio-sonde observation suggested that the Asian dust acted as ice nuclei at the ice-saturated region. These results suggest the importance of dust's climate impact via the indirect effect of radiative forcing due to the activation of dust into ice nuclei. (3) Studies on the aerosol concentration indicated that size distributions of aerosols in downwind regions have bimodal peaks. One peak was in the submicron range and the other in the supermicron range. The main soluble components of the supermicron peak were Na⁺, Ca²⁺, NO₃⁻, and Cl⁻. In the downwind region in Japan, the dust, sea salt, and a mixture of the two were found to be dominant in coarse particles in the mixed boundary layer. (4) Observation of the optical properties of dust by sky-radiometer, particle shoot absorption photometer (PSAP), and Nephelometer indicated that unpolluted dust at source region has a weaker absorption than originally believed.A sensitivity experiment of direct RF by dust indicated that single scattering albedo is the most important of the optical properties of dust and that the sensitivity of instantaneous RF in the shortwave region at the top of the atmosphere to the refractive index strongly depends on surface albedo. A global scale dust model, MASINGAR, was used for evaluation of direct RF due to dust. The results indicated the global mean RF at the top and the bottom of the atmosphere were − 0.46 and − 2.13 W m^− 2 with cloud and were almost half of the RF with cloud-free condition.     

Rifting of Kyushu, Japan, based on the fault-controlled concurrent eruption of oceanic island basalt-type and island arc-type lavas

The tectonic environment of Kyushu, Japan is affected both by the subduction of the Philippine Sea plate and by the extensional tectonics related to rifting of Okinawa Trough at the eastern margin of the Eurasia Plate. We found that the Sendai fault zone acts as a channel for concurrent eruption of oceanic island basalt (OIB)-type and island arc (IA)-type basaltic rocks, propagating west to east in the Sendai region of southern Kyushu. The location of the Sendai fault zone is likely to correspond to the left-lateral shear zone in southern Kyushu as inferred by GPS Earth Observation Network. A similar magmatic association is present in the Beppu–Shimabara (BS) graben system in central Kyushu. The associate magmas of OIB-type rocks in Kyushu can be classified into typical, EM II-like and their intermediate OIB-type magmas in addition to MORB-like OIB-type magma in ⁸⁷Sr/⁸⁶Sr–Nb/Y systematics. Typical OIB-type and intermediate OIB-type magmas are erupted within the Sendai fault zone and BS graben system, respectively. The former is characterized by highest Nb/Y but low ⁸⁷Sr/⁸⁶Sr similar to MORB-like OIB-type magma erupted in northern Kyushu and the latter has intermediate Nb/Y and ⁸⁷Sr/⁸⁶Sr between typical and EM II-like OIB-type magmas. Almost all the IA-type rocks within the Sendai fault zone are generated from parental IA-type magma in Kyushu and characterized by weak crustal assimilation, having the lowest ⁸⁷Sr/⁸⁶Sr similar to typical OIB-type magma but the highest ¹⁴³Nd/¹⁴⁴Nd of arc magmas in Kyushu. The ages of both types of basaltic rocks within the Sendai fault zone range from 1.6 to <0.01?Ma clearly younger than those of andesitic rocks on northern and southern outsides of the fault zone and become younger from west to east. Initial formation of the fault zone has been induced by the counterclockwise rotation of southern Kyushu during the last 2?Ma as well as the BS graben system. Kyushu has continued to be split into three parts by the Sendai fault zone and BS graben during the Quaternary; northern, central, and southern zones. Their initial formation ages are likely to be linked to the initial rifting age of the middle Okinawa Trough back-arc basin.     

Investigating the multiscale teleconnections of Madden–Julian oscillation and monthly rainfall using time-dependent intrinsic cross-correlation

Natural Hazards - This study proposes a novel ensemble empirical mode decomposition (EEMD) time-dependent intrinsic cross-correlation (TDICC)-coupled framework to investigate the correlation...