Detecting recent changes in the demographic parameters of drosophilid populations from western and central Africa

Previous genetic studies showing evidence of past demographic changes in African drosophilids suggested that these populations had strongly responded to Quaternary climate changes. We surveyed nine species of Zaprionus, a drosophilid genus mostly present in Africa, in forests located between southern Senegal and Gabon. The mitochondrial COI gene showed contrasted levels of sequence variation across species. Populations of the only cosmopolitan species of the genus, Z. indianus, and of its closely related sibling species, Z. africanus, are highly polymorphic and appear to have undergone a continuous population expansion beginning about 130,000 years ago. Five less variable species probably underwent a population expansion beginning only about 20,000–30,000 years ago. One of them, Z. taronus, was significantly structured between forest blocks. The last two species were nearly monomorphic, probably due to infection by Wolbachia. These results are similar to those obtained in three species from the melanogaster subgroup, and may be typical of the responses of African drosophilid populations to glacial cycles.     

Environmental effects of river sand mining: a case from the river catchments of Vembanad lake,Southwest coast of India

Rivers in the southwest coast of India are under immense pressure due to various kinds of human activities among which indiscriminate extraction of construction grade sand is the most disastrous one. The situation is rather alarming in the rivers draining the Vembanad lake catchments as the area hosts one of the fast developing urban-cum-industrial centre, the Kochi city, otherwise called the Queen of Arabian Sea. The Vembanad lake catchments are drained by seven rivers whose length varies between 78 and 244 km and catchment area between 847 and 5,398 km². On an average, 11.73 million ty⁻¹ of sand and gravel are being extracted from the active channels and 0.414 million ty⁻¹ of sand from the river floodplains. The quantity of instream mining is about 40 times the higher than the sand input estimated in the gauging stations. As a result of indiscriminate sand mining, the riverbed in the storage zone is getting lowered at a rate of 7–15 cm y⁻¹ over the past two decades. This, in turn, imposes severe damages to the physical and biological environments of these river systems. The present paper deals with the environmental effects of indiscriminate sand mining from the small catchment rivers in the southwest coast of India, taking the case of the rivers draining the Vembanad lake catchments as an example.     

Seasonal variations of dissolved organic matter and nutrients in sediment pore water in the inner part of Tokyo Bay

At four stations in Tokyo Bay, pore water profiles of dissolved organic carbon (DOC), nitrogen (DON), phosphorus (DOP), and inorganic nutrients were determined at 3-month intervals over 6 years. Concentrations of dissolved organic matter (DOM) and nutrients were significantly higher in pore waters than in the overlying waters. Pore water DOC, DON, and DOP concentrations in the upper most sediment layer (0–1 cm) ranged from 246 to 888 μM, from 14.6 to 75.9 μM, and from 0.02 to 9.83 μM, respectively. Concentrations of DOM and nutrients in pore waters occasionally showed clear seasonal trends and were highest in the summer and lowest in the winter. The seasonal trends in the pore water DOM concentrations were coupled with trends in the overlying water temperature and dissolved oxygen concentration. Benthic effluxes of DON and DOP were low compared with those of inorganic nutrients, accounting for only 1.0 and 1.5 % of the total benthic effluxes of nitrogen and phosphorus, respectively; thus benthic DOM fluxes were quantitatively insignificant to the inorganic nutrient fluxes in Tokyo Bay. The DOM fluxes represented about 7, 3, and 10 % of the riverine discharge of DOC, DON, and DOP to Tokyo Bay, respectively.     

Identification of aryl hydrocarbon receptor 2 in aquatic birds; cDNA cloning of AHR1 and AHR2 and characteristics of their amino acid sequences

The toxic effects of 2,3,7,8-tetrachlorodibenzo-p-dioxin (TCDD) and its related planar halogenated aromatic hydrocarbons (PHAHs) are mediated by the aryl hydrocarbon receptor (AHR). To investigate the potential sensitivity to PHAHs and the evolutional diversity of AHR in aquatic birds, AHR cDNAs were initially cloned and sequenced from the livers of a black-footed albatross (Diomedea nigripes) and a common cormorant (Phalacrocorax carbo). In this study, we report the identification of two distinct AHR paralog genes in these species. The two full-length AHR cDNAs from albatross were highly divergent (33% overall amino acid identity, and 60% identity in the N-terminal half). Phylogenetic analysis showed that one of them belongs to the AHR1 clade and the other one to the AHR2 clade, which has been identified only from fishes, but not yet from mammals and birds. Albatross AHR1 encoded a 861-residue protein with a predicted molecular mass of 96.7 kDa, and in the case of albatross AHR2, 925 amino acids and 100.7 kDa. From cormorant liver, the full-length AHR1 cDNA and the partial AHR2 cDNA were cloned. This result strongly suggests that bird species also possess two distinct AHR genes (AHR1 and AHR2). To our knowledge, this is the first report on the presence of an AHR2-like isoform in bird species as well as in fish.     

Shear-wave splitting and reservoir crack characterization: the Coso geothermal field

This paper aims to improve current understanding of the subsurface fracture system in the Coso geothermal field, located in east-central California. The Coso reservoir is in active economic development, so that knowledge of the subsurface fracture system is of vital importance for an accurate evaluation of its geothermal potential and day-to-day production. To detect the geometry and density of fracture systems we applied the shear-wave splitting technique to a large number of high-quality seismograms from local microearthquakes recorded by a permanent, 16-station, down-hole, 3-component seismic array running at 480 samples/s. The analysis of shear-wave splitting (seismic birefringence) provides parameters directly related to the strike of the subsurface fractures and their density (number of cracks per unit volume), and, consequently, is an important technique to outline zones of high permeability. Three major fracture directions N10–30W, N0–20E, and N40–50E, of which the first and the second are the most prominent, were identified from the seismograms recorded by the 16-station down-hole array. All orientations are consistent with the known strike of local sets of faults and fractures in local wells and at the surface, as well as with previous analyses of seismic anisotropy in the region. The high quality of the recordings has allowed us to launch an unprecedented investigation into the characteristics of the temporal variations in crack polarization and crack density in a producing geothermal environment. Preliminary results point to significant temporal changes in shear-wave time delays, probably influenced by temporal changes in crack density within a period of 5 years (1996–2000). They are tentatively interpreted as due to a local 3% increase in shear-wave velocity in the southwestern part of the field during 1999.     

Time-clustering behavior of spreading-center seismicity between 15 and 35°N on the Mid-Atlantic Ridge: observations from hydroacoustic monitoring

An earthquake catalog derived from the detection of seismically-generated T-waves is used to study the time-clustering behavior of moderate-size (?3.0 M) earthquakes between 15 and 35°N along the Mid-Atlantic Ridge (MAR). Within this region, the distribution of inter-event times is consistent with a non-periodic, non-random, clustered process. The highest degrees of clustering are associated temporally with large mainshock-aftershock sequences; however, some swarm-like activity also is evident. Temporal fluctuations characterized by a power spectral density P(f) that decays as 1/f^α are present within the time sequence, with α ranging from 0.12 to 0.55 for different regions of the spreading axis. This behavior is negligible at time scales less than ∼5×10³ s, and earthquake occurrence becomes less clustered (smaller α) as increasing size thresholds are applied to the catalog. A power-law size-frequency scaling for Mid-Atlantic Ridge earthquakes also can be demonstrated using the distribution of acoustic magnitudes, or source levels. Although fractal seismic behavior has been linked to the structure of the underlying fault population in other environments, power-law fault size distributions have not been observed widely in the mid-ocean ridge setting.     

Direct 40Ar/39Ar dating of Late Ordovician and Silurian brittle faulting in the southwestern Norwegian Caledonides

Structural data as well as U–Pb zircon and ⁴⁰Ar/³⁹Ar biotite and muscovite ages were collected from the Rolvsnes granodiorite in western Norway. The granodiorite intruded at c. 466 Ma, cooled quickly and escaped later viscous deformation. Brittle top‐to‐the‐NNW thrust faults (Set I) and WNW–ESE striking dextral strike‐slip faults (Set II) formed in a NNW–SSE transpressional regime. ⁴⁰Ar/³⁹Ar dating of synkinematic mica from both sets reveals a c. 450 Ma (Late Ordovician) age of faulting, which constrains early‐Caledonian brittle deformation. Set I and II faults are overprinted by a set of lower‐grade, variably oriented chlorite‐ and epidote‐coated faults (Set III) constraining WNW–ESE shortening. A lamprophyric dyke oriented compatibly with this stress field intruded at c. 435 Ma (Silurian), indicating that Set III formed at the onset of the Scandian Baltica–Laurentia collision. The preservation of Caledonian brittle structures indicates that the Rolvsnes granodiorite occupied a high tectonic level throughout the Caledonian orogeny.     

Regolith breccia Northwest Africa 7533: Mineralogy and petrology with implications for early Mars

Northwest Africa 7533, a polymict Martian breccia, consists of fine‐grained clast‐laden melt particles and microcrystalline matrix. While both melt and matrix contain medium‐grained noritic‐monzonitic material and crystal clasts, the matrix also contains lithic clasts with zoned pigeonite and augite plus two feldspars, microbasaltic clasts, vitrophyric and microcrystalline spherules, and shards. The clast‐laden melt rocks contain clump‐like aggregates of orthopyroxene surrounded by aureoles of plagioclase. Some shards of vesicular melt rocks resemble the pyroxene‐plagioclase clump‐aureole structures. Submicron size matrix grains show some triple junctions, but most are irregular with high intergranular porosity. The noritic‐monzonitic rocks contain exsolved pyroxenes and perthitic intergrowths, and cooled more slowly than rocks with zoned‐pyroxene or fine grain size. Noritic material contains orthopyroxene or inverted pigeonite, augite, calcic to intermediate plagioclase, and chromite to Cr‐bearing magnetite; monzonitic clasts contain augite, sodic plagioclase, K feldspar, Ti‐bearing magnetite, ilmenite, chlorapatite, and zircon. These feldspathic rocks show similarities to some rocks at Gale Crater like Black Trout, Mara, and Jake M. The most magnesian orthopyroxene clasts are close to ALH 84001 orthopyroxene in composition. All these materials are enriched in siderophile elements, indicating impact melting and incorporation of a projectile component, except for Ni‐poor pyroxene clasts which are from pristine rocks. Clast‐laden melt rocks, spherules, shards, and siderophile element contents indicate formation of NWA 7533 as a regolith breccia. The zircons, mainly derived from monzonitic (melt) rocks, crystallized at 4.43 ± 0.03 Ga (Humayun et al. 2013 ) and a ¹⁴⁷Sm‐¹⁴³Nd isochron for NWA 7034 yielding 4.42 ± 0.07 Ga (Nyquist et al. 2016 ) defines the crystallization age of all its igneous portions. The zircon from the monzonitic rocks has a higher Δ¹⁷O than other Martian meteorites explained in part by assimilation of regolith materials enriched during surface alteration (Nemchin et al. 2014 ). This record of protolith interaction with atmosphere‐hydrosphere during regolith formation before melting demonstrates a thin atmosphere, a wet early surface environment on Mars, and an evolved crust likely to have contaminated younger extrusive rocks. The latest events recorded when the breccia was on Mars are resetting of apatite, much feldspar and some zircons at 1.35–1.4 Ga (Bellucci et al. 2015 ), and formation of Ni‐bearing pyrite veins during or shortly after this disturbance (Lorand et al. 2015 ).     

Palynological characteristics of Kazakhstan Province of Carboniferous Euramerican Region

The paper presents results of palynological studies of the coal-bearing Carboniferous in Central Ka-zakhstan.A quantitative dynamics of major genera of miospores reflects an overall succession of the Carbonifer-ous miospore assemblages.Viséan Serpukhovian assemblages are dominanted by Lophozonotriletes fuscatus,Ac-anthozonotriletes cristifer,A.inclusus,Punctatisporites glabratus,Crassispora ignorata,C.scrupea,Cyclobacu-lisporites trichacanthus,Lycospora breviapiculata,L.echinata and Vallatisporites decrescens.Rare Punctatis-porites bertschoguriensis,Stenozonotriletes marginellus,Vallatisporites appilicatus,Verrucosisporites scrobiculatus,Reticulatisporites cancellatus,Granulatisporites arcuatus are recorded,which are not found in assemblages from overlying sediments.Bashkirian--Moscovian assemblages are dominated by Lycospora subtriquetra,L.pusilla,Vallatisporites ciliaris,Apiculatisporis mollis,Cyclogranisporites testiculatus,Calamospora microrugosa,Schopfi-pollenites principalis,Psilohymena psiloptera,Florinites grandis and Granulatisporites piroformis miospores.Cris-tatisporites latispinus,Angulisporites didymus,Thymospora obscura and Torispora securis are also present,as well as single Apiculatisporis curvispinus,Raistrickia inordinata,Marsupipollenites retroflexus,Entylissa caperata,Potonieisporites grandis and Cordaitina sp.A similar succession of miospore assemblages is recorded in the Carboniferous deposits of Europe and North America,which allows carrying out correlations,despite an endemic characters of many species of Paleozoic miospores from the coal-bearing Carboniferous of the Kazakh-stan Province in the Euramerian Paleofloristic Region.     

Evaluation of the structural damage of high‐rise reinforced concrete buildings using ambient vibrations recorded before and after damage

Evaluation of the degrees of structural damage suffered by high‐rise residential buildings after being subjected to strong ground motions is extremely important to the development of life continuity planning for building residents. However, these evaluations cannot be based on strong‐motion records alone, because earthquake observation equipment is not installed in most such buildings in Japan. In this study, we propose simple equations for estimating the stiffness degradation rate and the peak inter‐story drift ratio (PIDR) by using ambient vibration records instead of strong‐motion records when high‐rise RC buildings are subjected to a severe earthquake. More specifically, we propose one equation that relates the square root of the stiffness degradation rate, which is the ratio of natural frequencies at the maximum response to the preliminary tremor response (elastic state), in strong‐motion records with the ratio of natural frequencies identified from ambient vibrations before and after damage was suffered. We also propose an equation that relates the PIDR with the stiffness degradation rate on the basis of the stiffness‐degrading bilinear restoring force characteristic derived from the strong‐motion records of 13 high‐rise buildings for the 1995 Hyogoken‐Nanbu Earthquake (Mw 6.9) and the 2011 Tohoku‐Oki Earthquake (Mw 9.0). Copyright © 2015 John Wiley & Sons, Ltd.