Anthropogenic influence on the planktonic community in the basin of Mamala Bay (Oahu Island,Hawaii) based on field and satellite data

The anthropogenic impact on the biomass of coastal plankton communities caused by submerged disposal of urban sewage waters (dumping) was studied. The observations were carried out in August–September of 2002–2004 in Mamala Bay (Oahu Island, Hawaii) using satellite and sea truth methods. An analysis of the variability of the integral indicators of the water column determined on the basis of shipborne measurements allowed us to divide them into two groups: the elements most sensitive to the pollution (heterotrophic bacteria (H-Bact), the phototrophic cyanobacteria Synechococcus spp. (SYN), and chlorophyll a (CHLa)) and the elements that manifested episodic positive dependence on the inflow of the polluted waters (heterotrophic unicellular eukaryotes, small unicellular algae, the phototrophic green bacteria Prochlorococcus spp., as well as the total biomass of microplankton). It was shown that the submerged wastewater disposal in the region of the diffuser of the dumping device led to an insignificant (1.2–1.4 times, on the average) local increase in the integral biomass of H-Bact, SYN, and in the content of CHLa. A similar but sharper (1.5–2.1, on the average) increase in these parameters was found in the water layers with maximal biomasses. The possible pathways of disposed waters (under the pycnocline, at its upper boundary, and in the entire mixed layer) were analyzed on the basis of studying the vertical displacement of the biomasses of H-Bact, SYN, and prochlorophytes. The possibility of using the optical anomalies distinguished from satellite data as markers of anthropogenic eutrophication caused by dumping was confirmed. Application of such markers depends on the water transparency and on the shapes of the curves of the vertical distribution of autotrophic organisms.     

Variability in the nutritional value of the major copepods in Cape Cod Bay (Massachusetts, USA) with implications for right whales

The North Atlantic right whale, a seriously endangered species, is found in Cape Cod Bay (Massachusetts, USA) during the winter and early spring. During their residency in these waters, these whales are frequently observed feeding. This study evaluated spatial and temporal changes in the chemical composition (carbon weight and C/N ratio) of the food resource targeted by the right whales in Cape Cod Bay. The three taxa measured (Centropages typicus, Pseudocalanus spp., and Calanus finmarchicus) had highly variable chemical compositions resulting from the different life strategies and from fluctuations in their surrounding environment. The impact of seasonal variability in the energy densities of the food resource of right whales was calculated and compared to the energetic requirements of these whales. Calculations indicated that differences in the nutritional content of the zooplankton prey in Cape Cod Bay could have a considerable effect on the nutrition available to the right whales. Therefore, it is likely that using more precise estimates of the energetic densities of the prey of right whales would lead to a re‐evaluation of the adequacy of the food resource available to these whales in the North Atlantic.     

Characterisation and preliminary quantification of the methane reservoir in a coastal sedimentary source: San Simón Bay,Ría de Vigo,NW Spain

Ría de Vigo is a river valley flooded by the sea, with a bay (San Simón Bay) at its innermost part. The accumulation of Holocene sediment in San Simón Bay has been studied by the integration of 1) large scale high resolution seismic data, and 2) detailed geochemical analysis of a gravity core. In San Simón Bay the majority of the seismic records are obscured by acoustic turbidity which represents gassy sediments, but on records from Rande Strait it is possible to distinguish two Quaternary seismic sequences; an Upper Pleistocene sequence (SQ1) and a Holocene sequence (SQ2). Only SQ2 is recognized in San Simón Bay where it is comprised of two seismic units; the upper unit represents the HST sediment, i.e. the period of highest sea level. A gravity core taken within the gassy zone at 10 m water depth provided 3.55 m of fine-grained sediments (muds) from the youngest seismic unit (4 m thick). Geochemical analysis show high values (4 to 10%) of TOC. Sediment and porewater analyses indicate a distinct sulphate–methane transition zone (SMTZ) between 60 and 80 cm where sulphate is depleted (to <1.7 mM) and methane increases (to >0.4 mM). The top of the acoustic turbidity (the gas front) at 80 cm corresponds to the lower limit of the SMTZ. The methane cannot have been derived from the underlying metamorphic and granitic rocks, but was probably derived by microbial degradation of the organic matter in the Holocene sediments. We estimate that the sediments of the Bay contain approximately 1.8 × 10⁶ m³ of organic carbon and 275 ton of methane.     

The eastern slope of the southern Adriatic basin: a case study of submarine landslide characterization and tsunamigenic potential assessment

Marine Geophysical Research - The southern Adriatic basin is the current foredeep of the Albanide fold-and-thrust belt that runs along the eastern boundary of the Adriatic basin and partly owes its...     

Upwelling in the Alaskan Beaufort Sea: Atmospheric forcing and local versus non-local response

The spin up and relaxation of an autumn upwelling event on the Beaufort slope is investigated using a combination of oceanic and atmospheric data and numerical models. The event occurred in November 2002 and was driven by an Aleutian low storm. The wind field was strongly influenced by the pack-ice distribution, resulting in enhanced winds over the open water of the Chukchi Sea. Flow distortion due to the Brooks mountain range was also evident. Mooring observations east of Barrow Canyon show that the Beaufort shelfbreak jet reversed to the west under strong easterly winds, followed by upwelling of Atlantic Water onto the shelf. After the winds subsided a deep eastward jet of Atlantic Water developed, centered at 250 m depth. An idealized numerical model reproduces these results and suggests that the oceanic response to the local winds is modulated by a propagating signal from the western edge of the storm. The disparity in wave speeds between the sea surface height signal—traveling at the fast barotropic shelf wave speed—versus the interior density signal—traveling at the slow baroclinic wave speed—leads to the deep eastward jet. The broad-scale response to the storm over the Chukchi Sea is investigated using a regional numerical model. The strong gradient in windspeed at the ice edge results in convergence of the offshore Ekman transport, leading to the establishment of an anti-cyclonic gyre in the northern Chukchi Sea. Accordingly, the Chukchi shelfbreak jet accelerates to the east into the wind during the storm, and no upwelling occurs west of Barrow Canyon. Hence the storm response is fundamentally different on the Beaufort slope (upwelling) versus the Chukchi slope (no upwelling). The regional numerical model results are supported by additional mooring data in the Chukchi Sea.     

Corrections to ocean surface forcing in the California Current System using 4D variational data assimilation

The option for surface forcing correction, recently developed in the 4D-variational (4DVAR) data assimilation systems of the Regional Ocean Model System (ROMS), is presented. Assimilation of remotely-sensed (satellite sea surface height anomaly and sea surface temperature) and in situ (from mechanical and expendable bathythermographs, Argo floats and CTD profiles) oceanic observations has been applied in a realistic, high resolution configuration of the California Current System (CCS) to sequentially correct model initial conditions and surface forcing, using the Incremental Strong constraint version of ROMS-4DVAR (ROMS-IS4DVAR). Results from both twin and real data experiments are presented where it is demonstrated that ROMS-IS4DVAR always reduces the difference between the model and the observations that are assimilated. However, without corrections to the surface forcing, the assimilation of surface data can degrade the temperature structure at depth. When using surface forcing adjustment in ROMS-IS4DVAR the system does not degrade the temperature structure at depth, because differences between the model and surface observations can be reduced through corrections to surface forcing rather than to temperature at depth. However, corrections to surface forcing can generate abnormal spatial and temporal variability in the structure of the wind stress or surface heat flux fields if not properly constrained. This behavior can be partially controlled via the choice of decorrelation length scales that are assumed for the forcing errors. Abnormal forcing corrections may also arise due to the effects of model error which are not accounted for in IS4DVAR. In particular, data assimilation tends to weaken the alongshore wind stress in an attempt to reduce the rate of coastal upwelling, which seems to be too strong due to other sources of error. However, corrections to wind stress and surface heat flux improve systematically the ocean state analyses. Trends in the correction of surface heat fluxes indicate that, given the ocean model used and its potential limitations, the heat flux data from the Coupled Ocean–Atmosphere Mesoscale Prediction System (COAMPS) used to impose surface conditions in the model are generally too low except in spring-summer, in the upwelling region, where they are too high. Comparisons with independent data provide confidence in the resulting forecast ocean circulation on timescales ～14 days, with less than 1.5 °C, 0.3 psu, and 9 cm RMS error in temperature, salinity and sea surface height anomaly, respectively, compared to observations.     

The Regional Ocean Modeling System (ROMS) 4-dimensional variational data assimilation systems: Part II - Performance and application to the California Current System

The Regional Ocean Modeling System (ROMS) 4-dimensional variational (4D-Var) data assimilation systems have been systematically applied to the mesoscale circulation environment of the California Current to demonstrate the performance and practical utility of the various components of ROMS 4D-Var. In particular, we present a comparison of three approaches to 4D-Var, namely: the primal formulation of the incremental strong constraint approach; the dual formulation “physical-space statistical analysis system”; and the dual formulation indirect representer approach. In agreement with theoretical considerations all three approaches converge to the same ocean circulation estimate when using the same observations and prior information. However, the rate of convergence of the dual formulation was found to be inferior to that of the primal formulation. Other aspects of the 4D-Var performance that relate to the use of multiple outer-loops, preconditioning, and the weak constraint are also explored. A systematic evaluation of the impact of the various components of the 4D-Var control vector (i.e. the initial conditions, surface forcing and open boundary conditions) is also presented. It is shown that correcting for uncertainties in the model initial conditions exerts the largest influence on the ability of the model to fit the available observations. Various important diagnostics of 4D-Var are also examined, including estimates of the posterior error, the information content of the observation array, and innovation-based consistency checks on the prior error assumptions. Using these diagnostic tools, we find that more than 90% of the observations assimilated into the model provide redundant information. This is a symptom of the large percentage of satellite data that are used and to some extent the nature of the data processing employed. This is the second in a series of three papers describing the ROMS 4D-Var systems.     

Grazing suppression of dimethylsulphoniopropionate (DMSP) accumulation in iron-fertilised, sub-Antarctic waters

The impact of in situ iron fertilisation on the production of particulate dimethylsulphoniopropionate (DMSPp) and its breakdown product dimethyl sulphide (DMS) was monitored during the SOLAS air-sea gas exchange experiment (SAGE). The experiment was conducted in the high nitrate, low chlorophyll (HNLC) waters of the sub-Antarctic Southern Ocean (46.7°S 172.5°E) to the south-east of New Zealand, during March-April, 2004. In addition to monitoring net changes in the standing stocks of DMSPp and DMS, a series of dilution experiments were used to determine the DMSPp production and consumption rates in relation to increased iron availability. In contrast to previous experiments in the Southern Ocean, DMS concentrations decreased over the course of the 15-d iron-fertilisation experiment, from an integrated volume-specific concentration in the mixed layer on day 0 of 0.78 nM (measured values 0.65-0.91 nM) to 0.46 nM (measured values 0.42-0.47 nM) by day 15, in parallel with the surrounding waters. DMSPp, chlorophyll a and the abundance of photosynthetic picoeukaryotes exhibited indiscernible or only moderate increases in response to the raised iron availability, despite an obvious physiological response by the phytoplankton. High specific growth rates of DMSPp, equivalent to 0.8-1.2 doublings d⁻¹, occurred at the simulated 60% light level of the dilution experiments. Despite the high production rates, DMSPp accumulation was suppressed in part by microzooplankton grazers who consumed between 61% d⁻¹ and 126% d⁻¹ of the DMSPp production. Temporal trends in the rates of production and consumption illustrated a close coupling between the DMSP-producing phytoplankton and their microzooplankton grazers. Similar grazing and production rates were observed for the eukaryotic picophytoplankton that dominated the phytoplankton biomass, partial evidence that picoeukaryotes contributed a substantial proportion of the DMSP synthesis. These rates for DMSPp and picoeukaryotes were considerably higher than for chlorophyll a, indicating higher cycling rates of the DMSP-producing taxa than for the bulk phytoplankton community. When compared to the total phytoplankton community, there was no evidence of selection against the DMSP-containing phytoplankton by the microzooplankton grazers; the opposite appeared to be the case. SAGE demonstrated that increased iron availability in the HNLC waters of the Southern Ocean does not invariably lead to enhanced DMS sea-air flux. The potential suppression of DMSPp accumulation by grazers needs to be taken into account in future attempts to elevate DMS emission through in situ iron fertilisation and in understanding the hypothesised link between levels of Aeolian iron deposition in the Southern Ocean, DMS emission and global albedo.