Population genetics and evolutionary demography of Ucides cordatus (Decapoda: Ocypodidae)

Variation in a fragment of the mitochondrial control region was investigated to assess the population history of the mangrove land crab, Ucides cordatus L., based on 100 individuals from five locations throughout the Brazilian coast. There was considerable variability in the studied fragment, with every individual showing a distinct haplotype. When regions of ambiguous alignment were removed, 90 haplotypes were still recognized, of which only 1 was shared among locations. There was no statistically significant evidence for geographical structure in the pattern of genetic variability based on a nested clade analysis, even though the geographical distances among the farthest collection sites exceeded 3000 km. Moreover, the mismatch distribution of pairwise differences showed a smooth unimodal distribution that is consistent with a recent population expansion of U. cordatus, either when each location was analysed in isolation or when all samples were combined. Interestingly, the estimates for the duration of such expansion vary latitudinally, suggesting that the expansion of the population of U. cordatus proceeded in a southward direction. These results indicate a possible relationship between the growth in the population of the mangrove land crab and the dynamics of mangrove ecosystems during the Quaternary.     

Identification of source of a marine oil-spill using geochemical and chemometric techniques

The current work aimed to identify the source of an oil spill off the coast of Maranhão, Brazil, in September 2005 and effect a preliminary geochemical survey of this environment. A combination of bulk analytical parameters, such as carbon isotope (δ¹³C) and Ni/V ratios, and conventional fingerprinting methods (High Resolution Gas Chromatography and Mass Spectrometry) were used. The use of bulk methods greatly speeded source identification for this relatively unaltered spill: identification of the likely source was possible at this stage. Subsequent fingerprinting of biomarker distributions supported source assignment, pointing to a non-Brazilian oil. Steranes proved the most useful biomarkers for sample correlation in this work. Distribution patterns of environmentally more resilient compound types, such as certain aromatic structures, proved inconclusive for correlation, probably in view of their presence in the background.     

GPS L1-Frequency Observations of Equatorial Scintillations and Irregularity Zonal Velocities

In this work, the climatology of ionospheric scintillations at global positioning system (GPS) L-band frequency and the zonal drift velocities of scintillation-producing irregularities were depicted for the equatorial observatory of São Luis (2.33°S; 44.21°W; dip latitude 1.3°S), Brazil. This is the first time that the hourly, monthly, and seasonal variations of scintillations and irregularity zonal drifts at São Luis were characterized during periods of different solar activity levels (from December 1998 to February 2007). The percentage occurrence of scintillations at different sectors of the sky was also investigated, and the results revealed that the scintillations are more probable to be observed in the west sector of the sky above São Luis, whereas the north–south asymmetries are possibly related to asymmetries in the plasma density distribution at off-equatorial latitudes. The scintillations on GPS signals occurred more frequently around solar maximum years, but it is also clear from the results of a strong variability in the scintillation activity in the years with moderate solar flux during the descending phase of the solar cycle. The equatorial scintillations occur predominantly during pre-midnight hours with a broad maximum near the December solstice months. In general, weak level of scintillations (S ₄ index between 0.2 and 0.4) dominated at all seasons; however, during the winter months around solar maximum years (although the scintillation occurrence is extremely low), stronger levels of scintillations (S ₄ > 0.6) may occur at comparable rate with the weak scintillations. The irregularity zonal velocities, as estimated from the GPS spaced-receiver technique, presented a different scenario for the two seasons analyzed; during the equinoxes, the magnitude of the zonal velocities appeared not to change with the solar activity, whereas during the December solstice months, the larger magnitudes were observed around solar maximum years. Other relevant aspects of the observations are highlighted and discussed.     

Management of non-structural measures in the prevention of flash floods: a case study in the city of Duque de Caxias,state of Rio de Janeiro,Brazil

In the last years, natural hazards related to flash floods have caused serious damage and losses to the population of the state of Rio de Janeiro. This research discusses the importance of implementing a methodology for the prevention of flash floods, by comparing the methods applied since 2013 in the city of Duque de Caxias, in the Baixada Fluminense region of the state of Rio de Janeiro, Brazil, and the major prevention actions suggested by the Flash Flood Early Warning System Reference Guide from the National Oceanic and Atmospheric Administration, questioning civil defense professionals about the importance of each method to vulnerable communities. Even without the occurrence of an extreme event that proves the effectiveness of the method between 2014 and 2016, the population will certainly be better prepared to face the risks of disasters in the city in the future. In addition, the study also underscores an approach of approximation between academic studies and operational activities, which is still very incipient in Brazil.     

A new model for flow in shale-gas reservoirs including natural and hydraulic fractures

In this work, we construct a new coupled Multiscale/Discrete Fracture Model for compressible flow in a multiporosity shale gas reservoir containing networks of natural and hydraulic fractures. The geological formation is characterized by four distinct length scales and levels of porosity. The window of observation of the finest (nanoscale) portraits the nanopores within organic matter containing adsorbed gas. At the microscale, the medium is formed by two solid phases: organic, composed by kerogen aggregates, and inorganic (clay, quartz, calcite). Such phases are separated by the network of partially-saturated interparticle pores where microscopic free gas flow influenced by Knudsen effects along with gas diffusion in the immobile water phase occur simultaneously. The upscaling of the local flow to the mesoscale gives rise to a nonlinear homogenized pressure equation in the shale matrix which lies adjacent to the system of natural fractures. Homogenization of the coupled matrix/preexisting fractures to the macroscale leads to a microstructural model of dual porosity type. Such homogenized model is subsequently coupled with the hydrodynamics in the network of induced fractures which, in the context of the discrete fracture modeling, are treated as (n ? 1), (n = 2, 3) lower dimensional objects. In order to handle numerically the nonlinear interaction between the different flow equations, we adopt a superposition argument, firstly proposed by Arbogast (1996), in each iteration of a fixed-point algorithm. The resultant governing equations are discretized by the finite element method and numerical simulations of gas production in stratified arrangements of the fracture networks are presented to illustrate the potential of the multiscale approach.     

Shrimp U–Pb zircon dating and palynology of bentonitic layers from the Permian Irati Formation, Paraná Basin, Brazil

This paper presents the first SHRIMP zircon age data from bentonitic ash fall layers intercalated with the Irati sedimentary rocks, as well as palynofossils retrieved from the PETROBRAS-Six mine, Paraná State, southern Brazil. The Permian Irati Formation is one the most important oil source horizons within the Paraná Basin, and consists mainly of siltstones, gray claystones, as well as organic-rich claystones intercalated with limestones. Zircon morphology based on cathodoluminescence images includes two different populations: a dominant population of euhedral, prismatic, elongate to acicular grains which are most likely related to an ash fall volcanism; and a population of rounded to large prismatic grains, that were interpreted as detrital grains. SHRIMP analysis performed on the euhedral and prismatic grains revealed an age of ca. 278.4 ± 2.2 Ma (7 points with 95% confidence) interpreted as the crystallization age of the volcanic eruption. Based on this new dating, the Irati Formation should be placed on the Lower Permian (Cisuralian), Artinskian in age, modifying substantially the traditional ages previously attributed to this unit. The palynofossils from this level include key species of the Lueckisporites virkkiae Zone (such as L. virkkiae, L. densicorpus, L. stenotaeniatus, Weylandites lucifer, Alisporites splendens). Typical species of this zone also occur in African and other South American (Argentina) Permian strata, allowing stratigraphical correlations. The origin of the ash falls is not clearly defined. It may be related either to calc-alkaline arc magmatism associated to the Sanrafaelica Orogeny (275 and 250 Ma) or to bimodal volcanic events associated to an early intracontinental rift developed within southwestern Gondwana at ca. 278 My. The dating of this unit is significative to calibrate biostratigraphic schemes along the Paraná Basin, as well as equivalent zones in Gondwana areas, mainly in its Occidental portion.     

Strength and Compressibility Characteristics of a Soft Clay Subjected to Ground Treatment

The compressibility properties, undrained shear strength, and stress history are essential for reliable calculations of settlement and bearing capacity of soft soils. However, it is sometimes a challenge to determine representative parameters for very soft and high plasticity clays, which are often found in Brazilian coastal areas. In this study an extensive site investigation was planned aiming to interpret the behaviour of a trial embankment on stabilized soft ground. The site investigation was carried out in a test area located in the west of city of Rio de Janeiro, consisted of three clusters in which standard penetration tests, vane shear tests, and piezocone tests (CPTu) were performed. A number of correlations was developed and compared with empirical equations in order to verify their reliability. The results of these tests made it possible to define geotechnical parameters of the soft clay to use in the numerical and analytical computations of the embankment on reinforced ground.     

River tributaries as sediment sinks: Processes operating where the Tapajós and Xingu rivers meet the Amazon tidal river

The Amazon River is the largest fluvial source of fresh water and sediment to the global ocean and has the longest tidally influenced reach in the world. Two major rivers, the Tapajós and Xingu, enter the Amazon along its tidal reach. However, unlike most fluvial confluences, these are not one‐way conduits through which water and sediment flow downstream towards the sea. The drowned‐river valleys (rias) at the confluences of the Tapajós and Xingu with the Amazon River experience water‐level fluctuations associated not only with the seasonal rise and fall of the river network, but also with semidiurnal tides that propagate as far as 800 km up the Amazon River. Superimposed seasonal and tidal forcing, distinct sediment and temperature signatures of Amazon and tributary waters, and antecedent geomorphology combine to create mainstem–tributary confluences that act as sediment traps rather than sources of sediment. Hydrodynamic measurements are combined with data from sediment cores to determine the distribution of tributary‐derived and Amazon‐derived sediment within the ria basins, characterize the sediment‐transport mechanisms within the confluence areas and estimate rates of sediment accumulation within both rias. The Tapajós and Xingu ria basins trap the majority of the sediment carried by the tributaries themselves in addition to ca 20 Mt year^?1 of sediment sourced from the Amazon River. These findings have implications for the interpretation of stratigraphy associated with incised‐valley systems, such as those that dominated the transfer of sediment to the oceans during lowstands in sea level.