Cytochrome P450 differences in normal and imposex-affected female whelk Buccinum undatum from the open North Sea

Normal and imposex-affected female Buccinum undatum were sampled from the open North Sea at three locations, one with low, and two with high shipping densities. Cytochrome P450 components and P450 aromatase activity were determined in the microsomal fractions isolated from pooled digestive gland/gonads. Cytochrome P450 aromatase activity was significantly higher (P < 0.05) in normal females collected in the low shipping density area (1,325 +/- 295 fmol/h/mg protein) than levels from imposex animals from a high shipping density area (620 +/- 287 fmol/h/mg protein). A negative correlation was found between aromatase activity and organotin body burden (r = -0.99). Levels of CYP450, cytochrome b5 and NADPH cytochrome c reductase activity did not show differences among groups. This is the first field evidence of depressed aromatase activity in imposex affected females, although additional research under laboratory controlled conditions is required to fully understand the mechanisms underlying the development of imposex in this species.     

Diet of Phycis blennoides (Gadidae) in Relation to Fish Size and Season in the Western Mediterranean (Spain)

Abstract. Despite its commercial value, little is known about the feeding ecology of the greater forkbeard, Phycis blennoides (Brünnich 1768). The stomach contents of 2631 greater forkbeard were taken at monthly intervals off the coast of the Gulf of Valencia (western Mediterranean). They were examined in order to assess the diet and to determine the fish size- and season-related dietary variation of the species. Prey items were identified to the lowest taxonomic level possible. The basic food consisted of epibenthic species, mostly Decapoda, Mysidacea and Teleostei. A change in food composition based on fish size was observed and seasonal variation in diet was also recorded. The food overlap analysis indicated a high convergence in diet among similar size groups.     

Recent sediment transport and accumulation on the NW Iberian margin

Five transects across the NW Iberian margin were studied in the framework of the EU-funded Ocean Margin EXchange II (OMEX II) project, to determine and establish recent sediment and organic carbon transport and accumulation processes and fluxes.On the Galician shelf and shelf edge, resuspension of sediments resulting in well-developed bottom nepheloid layers was observed at all stations, but transport of suspended sediment appears largely confined to the shelf. On the continental slope, only very dilute bottom nepheloid layers were present, and intermediate nepheloid layers were only occasionally seen. This suggests that cross-slope transfer of particles is limited by the prevailing northerly directed shelf and slope currents.Optical backscatter and ADCP current measurements by the BOBO lander, deployed at 2152 m depth on the Galician slope, indicated that particles in the bottom boundary layer were kept in suspension by tidal currents with highest speeds between 15–25 cm s⁻¹. Net currents during the recording period August 6th–September 10th 1998, were initially directed along-slope toward the NNW, but later turned off-slope toward the SW.The separation of the water masses on the slope from the sediment-laden shelf water by the along-slope current regime is reflected in the recent sedimentary deposits of the Galician shelf and slope. Apart from compositional differences, shelf deposits differ from those on the slope by their higher flux of excess ²¹⁰Pb (0.57–5.37 dpm cm⁻²y⁻¹ versus 0.11–3.00 dpm cm⁻²y⁻¹), a much higher sediment accumulation rate (315.6–2295.9 g m⁻²y⁻¹ versus 10.9–124.7 g m⁻²y⁻¹) and organic carbon burial rate (1.01–34.30 g m⁻²y⁻¹ versus 0.01–0.69 g m⁻²y⁻¹).In contrast to the observations on the Galician margin, pronounced nepheloid layers occurred in the Nazaré Canyon, which extended to considerably greater water depths. This indicates that significantly greater transport of fine-grained particles in both the INL and the BNL was occurring within the canyon, as reflected in the exceptionally high ²¹⁰Pb excess flux (up to 34.09 dpm cm⁻²y⁻¹), mass accumulation rates (maximum 9623.1 g m⁻²y⁻¹) and carbon burial fluxes (up to 180.91 g m⁻²y⁻¹) in the sediment. However, radioisotope fluxes in the lower canyon were only slightly higher than at comparable depths on the Galician margin. This suggests that transport and rapid accumulation is focused on the upper and middle part of the canyon, from where it is episodically released to the deep sea. Compared to the Galician margin, the Nazaré Canyon may be considered as an important organic carbon depocenter on short time-scales, and a major conduit for particulate matter transport to the deep sea on >100 y time-scales.     

赤潮生物种类特征光谱获取技术

较为系统地研究了赤潮生物水体反射率曲线获取方法。通过对 2类反射率反演方法得出的反射率曲线与实际反射率曲线进行比较 ,得出在不具备大气环境参数的情况下 ,经验线性法的反演结果与实际反射率曲线最接近的结论 ,并进一步对正常海水和赤潮生物水体的光谱特性进行分析 ,提取出赤潮生物水体的特征光谱。这是进行赤潮监测和识别的重要前提     

Investigating the molecular systematic relationships amongst selected Plesionika (Decapoda: Pandalidae) from the Northeast Atlantic and Mediterranean Sea

Despite the high number of species and ecological diversity of pandalid shrimps, there has been no previous attempt to resolve evolutionary relationships of several genera using molecular tools. Although mitochondrial DNA cytochrome oxidase I (COI) is widely used in barcoding studies to delimit species boundaries, additional insights into phylogenetic affinities can be obtained, especially when used in combination with data from additional genes. The knowledge of molecular diversity is essential to understand phylogenetic relationships and will help systematic clarifications. Based on partial fragments of the 16S and COI genes, we have focused specifically on addressing the systematic relationships of the economically and ecologically important shrimp genus Plesionika within a framework of five genera from within the Pandalidae. Our results showed that species within Plesionika are substantially divergent when compared with other genera, exhibiting the highest average nucleotide divergence, with 0.1123 and 0.0846 in COI and 16S genes, respectively. In addition, sequence divergence was found to vary greatly within the genus Plesionika (COI/16S): 0.0247/0.0016 between Plesionika antigai and Plesionika heterocarpus and 0.1616/0.098 between Plesionika heterocarpus and Plesionika edwardsii. We did not find amino acid sequence divergence between P. heterocarpus and P. antigai compared with P. heterocarpus and P. edwardsii (8.10%, K2P distance). Three species of Plesionika (P. antigai, P. heterocarpus and Plesionika scopifera) appear well separated from other Plesionika species in both maximum likelihood and Bayesian analyses. The present study confirms the utility of COI over 16S as a genetic marker to resolve relationships between different species of Plesionika from the Northeast Atlantic and Mediterranean Sea, in addition to species delimitation. The findings highlight the need to further review paraphyly within Plesionika in an attempt to recognize a concordance in the evolutionary history of Plesionika with major ecological and geological events.     

Throughfall patterns in sugarcane and riparian forest: understanding the effect of sugarcane age and land use conversion

Sugarcane is an annual crop with a dynamic canopy that changes over time mainly because of genetic adaptation. There is uncertainty about the temporal trends of throughfall (TF) in this important commercial crop. In the present paper, we used troughs to measure TF in a third and fourth ratoon and subsequently in a fourth and fifth ratoon. Additional measurements were carried out in an adjacent riparian forest. There were no significant differences between cycles of sugarcane, growth phases and riparian forest. The TF results for ratoon crop and riparian forest in 2011/2012 were 76% and 79.5% of gross rainfall, respectively, while in 2012/2013, they were 79% and 78%, respectively. However, TF was remarkably lower in the riparian forest relative to ratoon from the second half of the culm formation and elongation phase (280 days after harvest) until harvest. Copyright © 2016 John Wiley & Sons, Ltd.     

Non-linear channel–shoal dynamics in long tidal embayments

The dynamics of finite-amplitude bed forms in a tidal channel is studied with the use of an idealized morphodynamic model. The latter is based on depth-averaged equations for the tidal flow over a sandy bottom. The model considers phenomena on spatial scales of the order of the tidal excursion length. Transport of sediment mainly takes place as suspended load. The reference state of this model is characterized by a spatially uniform M₂ tidal current over a fixed horizontal bed. The temporal evolution of deviations from this reference state is governed by amplitude equations: these are a set of non-linear equations that describe the temporal evolution of bed forms. These equations are used to obtain new morphodynamic equilibria which may be either static or time-periodic. Several of these bottom profiles show strong similarity with the tidal bars that are observed in natural estuaries. The dependence of the equilibrium solutions on the value of bottom friction and channel width is investigated systematically. For narrow channels (width small compared to the tidal excursion length) stable static equilibria exist if bottom friction is slightly larger than r_cr. For channel widths more comparable to the tidal excursion length, multiple stable steady states may exist for bottom friction parameter values below r_cr. Regardless of channel width, stable time-periodic equilibria seem to emerge as the bottom friction is increased.Responsible Editor: Jens Kappenberg     

The Burren: a glacial,karstic and biokarstic expression of a limestone plateau in western Ireland

The term glaciokarst describes a landscape where both glacial and karstic processes have contributed to geomorphological evolution and has been applied to a range of environments from the high arctic to the alpine Mediterranean. Nevertheless, glaciokarstic environments globally often exhibit significant variation in geomorphological processes and landforms due to these geographical differences. The Burren, County Clare, Republic of Ireland, is often quoted as a quintessential glaciokarstic landscape. However, the Burren and other similar environments would appear to lean towards one end of the glaciokarst spectrum, where solutional and biological processes have been dominant throughout the Holocene, in contrast to ice‐dominated glaciokarsts where karstic and biokarstic processes are temperature‐limited and cryospheric processes remain the principal geomorphological agents. Holocene landscape evolution and the development of a range of meso‐, micro‐ and nano‐scale karren features on limestone surfaces appears to be largely biokarstic in origin. Karstification of many glacially scoured limestone pavements would have begun under acidic soil cover, with biological soil processes contributing to smooth, rounded cryptokarstic surface forms. Holocene soil erosion is attributed to anthropogenic activity, climatic fluctuations and the evolution of the karstic groundwater system leading to vertical soil loss through widening grikes. Exposed limestone pavements subject to subaerial conditions often exhibit extensive lichen colonization which has been shown to influence the overall rate of karstification and contribute to the development of micro‐ and meso‐scale bioweathering features. Where cryptokarstic features have been exhumed from beneath soil cover, their evolution under subaerial conditions leads to intermediate, polygenetic karren features. In light of our current understanding of the Burren landscape, it is proposed that the term glaciobiokarstic may be a better expression to encompass the biological processes that have played a fundamental role in the evolution of the Burren and similar landscapes, without neglecting the contribution of glacial and inorganic karstic processes. Copyright © 2016 John Wiley & Sons, Ltd.