Biomarkers in croakers Micropogonias furnieri (Teleostei: Sciaenidae) from polluted and non-polluted areas from the Patos Lagoon estuary (Southern Brazil): evidences of genotoxic and immunological effects

Biomarkers of exposure and effect of pollutants were analyzed in croakers Micropogonias furnieri (Teleostei: Sciaenidae) captured in winter and summer in a polluted and in a non-polluted site at the Patos Lagoon estuary (Southern Brazil). Catalase and glutathione S-transferase activities (exposure biomarkers) and lipid peroxidation (effect biomarker) were analyzed in liver samples. Other two effect biomarkers were also studied: blood cells DNA damage (through comet assay and micronucleus test) and respiratory burst measurements. In a broad view, results point to an important seasonal variation of the biochemical biomarkers analyzed. However, data obtained clearly indicate that croakers collected in winter at the polluted site were subjected to a level of clastogenic agents sufficient to generate irreversible genetic damages (mutations) and impair the fish immune system.     

A combined modelling and geochemical study of the fate of terrigenous inputs from mixed natural and mining sources in a coral reef lagoon (New Caledonia)

Open-cast mining for Ni, Cr and Co was conducted in the south-west part of New Caledonia during the 20th century. Abandoned mining and prospecting sites were severely affected by erosion, resulting in an increase in the load of terrigenous particles transported to the coral reef lagoon. This article assesses the impact of a typical small catchment area (La Coulée River, 85 km2 watershed) on two bays (Boulari and Sainte Marie) located near Noumea, New Caledonia's main city. This multi-disciplinary study combines geochemical, sedimentological, and hydrodynamic approaches. Ni and Cr concentrations contained in the geochemical matrix phase of the pelitic fraction were determined. The study of the geochemical signatures together with sedimentological data and 3D numerical simulations of the transport of non-settling particles throughout the lagoon demonstrated that terrigenous inputs from the Coulée River were mainly transported and deposited along the shoreline, reaching areas as distant as Sainte Marie Bay. Although quantitatively low (about 3% of the pelite mass of the bay sediments), the terrigenous inputs in Sainte Marie Bay originating from the Coulée River could be traced. The metal content in suspended matter was over 7000 mg kg(-1) for Ni and 4200 mg kg(-1) for Cr.     

Review of solutions for 3D hydrodynamic modeling applied to aquaculture in South Pacific atoll lagoons

A workshop organized in French Polynesia in November 2004 allowed reviewing the current methods to model the three-dimensional hydrodynamic circulation in semi-enclosed atoll lagoons for aquaculture applications. Mollusk (e.g. pearl oyster, clam) aquaculture is a major source of income for South Pacific countries such as French Polynesia or Cook Islands. This aquaculture now requires a better understanding of circulation patterns to improve the spatial use of the lagoons, especially to define the best area to set larvae collectors. The pelagic larval duration of the relevant species (<20 days) and the size of the semi-closed lagoons (few hundreds of km2) drive the specifications of the model in terms of the spatial and temporal scale. It is considered that, in contrast with fish, mollusk larvae movements are limited and that their cycle occurs completely in the lagoon, without an oceanic stage. Atolls where aquaculture is productive are generally well-bounded, or semi-closed, without significant large and deep openings to the ocean. Nevertheless part of the lagoon circulation is driven by oceanic water inputs through the rim, ocean swells, tides and winds. Therefore, boundary conditions of the lagoon system are defined by the spatial structure of a very shallow rim (exposition and number of hoas), the deep ocean swell climate, tides and wind regimes. To obtain a realistic 3D numerical model of lagoon circulation with adequate forcing, it is thus necessary to connect in an interdisciplinary way a variety of methods (models, remote sensing and in situ data collection) to accurately represent the different components of the lagoon system and its specific boundary conditions. We review here the current methods and tools used to address these different components for a hypothetical atoll of the Tuamotu Archipelago (French Polynesia), representative of the semi-closed lagoons of the South Pacific Ocean. We hope this paper will serve as a guide for similar studies elsewhere and we provide guidelines in terms of costs for all the different stages involved.     

Vegetation-based bioindication of humus forms in coniferous mountain forests

Humus forms, especially the occurrence and the thickness of the horizon of humified residues(OH), provide valuable information on site conditions.In mountain forest soils, humus forms show a high spatial variability and data on their spatial patterns is often scarce. Our aim was to test the applicability of various vegetation features as proxy for OH thickness.Subalpine coniferous forests dominated by Picea abies(L.) H. Karst. and Larix decidua Mill. were studied in the Province of Trento, Italian Alps,between ca. 900 and 2200 m a.s.l. Braun-Blanquet vegetation relevés and OH thickness were recorded at152 plots. The vegetation parameters, tested for their suitability as indicators of OH thickness,encompassed mean Landolt indicator values of the herb layer(both unweighted and cover-weighted means) as well as parameters of vegetation structure(cover values of plant species groups) calculated from the relevés. To our knowledge, the predictive power of Landolt indicator values(LIVs) for humus forms had not been tested before. Correlations between OH thickness and mean LIVs were strongest for the soil reaction value, but indicator values for humus,nutrients, temperature and light were also significantly correlated with OH thickness. Generally,weighting with species cover reduced the indicator quality of mean LIVs for OH thickness. The strongest relationships between OH thickness and vegetation structure existed in the following indicators: the cover of forbs(excluding graminoids and ferns) and the cover of Ericaceae in the herb layer. Regression models predicting OH thickness based on vegetation structure had almost as much predictive power as models based on LIVs. We conclude that LIVs analysis can produce fairly reliable information regarding the thickness of the OH horizon and, thus,the humus form. If no relevé data are readily available,a field estimation of the cover values of certain easily distinguishable herb layer species groups is much faster than a vegetation survey with consecutive indicator value analysis, and might be a feasible way of quickly indicating the humus form.     

Projection of future climate change conditions using IPCC simulations, neural networks and Bayesian statistics. Part 1: Temperature mean state and seasonal cycle in South America

Projections for South America of future climate change conditions in mean state and seasonal cycle for temperature during the twenty-first century are discussed. Our analysis includes one simulation of seven Atmospheric-Ocean Global Circulation Models, which participated in the Intergovernmental Panel on Climate Change Project and provided at least one simulation for the twentieth century (20c3m) and one simulation for each of three Special Report on Emissions Scenarios (SRES) A2, A1B, and B1. We developed a statistical method based on neural networks and Bayesian statistics to evaluate the models’ skills in simulating late twentieth century temperature over continental areas. Some criteria [model weight indices (MWIs)] are computed allowing comparing over such large regions how each model captures the temperature large scale structures and contributes to the multi-model combination. As the study demonstrates, the use of neural networks, optimized by Bayesian statistics, leads to two major results. First, the MWIs can be interpreted as optimal weights for a linear combination of the climate models. Second, the comparison between the neural network projection of twenty-first century conditions and a linear combination of such conditions allows the identification of the regions, which will most probably change, according to model biases and model ensemble variance. Model simulations in the southern tip of South America and along the Chilean and Peruvian coasts or in the northern coasts of South America (Venezuela, Guiana) are particularly poor. Overall, our results present an upper bound of potential temperature warming for each scenario. Spatially, in SRES A2, our major findings are that Tropical South America could warm up by about 4°C, while southern South America (SSA) would also undergo a near 2–3°C average warming. Interestingly, this annual mean temperature trend is modulated by the seasonal cycle in a contrasted way according to the regions. In SSA, the amplitude of the seasonal cycle tends to increase, while in northern South America, the amplitude of the seasonal cycle would be reduced leading to much milder winters. We show that all the scenarios have similar patterns and only differ in amplitude. SRES A1B differ from SRES A2 mainly for the late twenty-first century, reaching more or less an 80–90% amplitude compared to SRES A2. SRES B1, however, diverges from the other scenarios as soon as 2025. For the late twenty-first century, SRES B1 displays amplitudes, which are about half those of SRES A2.     

Relationship between electrical conductivity, <Superscript>18</Superscript>O of water and NO<Subscript>3</Subscript> content in different streamflow stages

The Ballenera Creek has 160 km² being a small catchment in the Pampa Plain in Argentina. This area has been deeply modified by human action through agricultural activities. From 2013 to 2017, electrical conductivity, stable isotopes of water and nitrate concentration monitoring program were conducted. The sampling included weekly and bimonthly samples in two sites along the stream, several groundwater wells and monthly precipitation. Chemical and isotopic tracers are used to discriminate the streamflow components and to evaluate their incidence in the nitrate concentration. The easiest conceptual model for gaining streams contemplates two main elements: direct runoff and groundwater (baseflow and pre-event water). The direct runoff has the lowest electrical conductivity and ¹⁸O_w variable content. The baseflow component is characterized by the highest electrical conductivity and isotope composition quite constant. Finally, pre-event water has an intermediate electrical conductivity and isotopic content close to the rainfall-weighted average composition. The nitrate concentration obtained was in general related to the different stream stages and was a useful indicator to evaluate the fertilization in agricultural zones.     

Zircon U–Pb geochronology of Ordovician magmatism in the polycyclic Ruitor Massif (Internal W Alps)

Among the Middle Penninic basements of the Internal NW-Alps, the Ruitor massif shows the best preserved remnants of pre-Permian metamorphic rocks. Their Barrovian-type mineral associations are somewhat masked by the greenschist to blueschist Alpine metamorphism of Tertiary age. Four Ruitor gneisses have been analysed, showing geochemical characters of granitoids from orogenic zones. Zircon morphology also suggests magmatic protoliths and a crustal source; some of the morphological zircon types suggest anatectic granites. The first U-Pb ages on zircon for this massif have been obtained concurrently through conventional multigrain and ion microprobe dating. Two metavolcanic rocks at 471LJ and 468ᆪ Ma could be slightly older than the porphyritic augen gneisses at 465ᆟ and 460lj Ma. Regional data from the other Internal basement massifs suggest that the Variscan event is poorly recorded, except in Ruitor-type units. Ruitor and Sapey gneisses belonged to the same unit (Nappe des Pontis), which was affected by a 480-450-Ma event including volcanism and anatexis and ended with a late calc-alkaline granite emplacement at 460-450 Ma. The distribution of Variscan basement units roughly parallels Alpine zonation.