Morphometric and molecular data on two mitochondrial genes of a newly discovered chimaeran fish (Hydrolagus melanophasma, Chondrichthyes)

Fresh and preserved (type material) specimens of the black ghost chimaera Hydrolagus melanophasma were compared for morphometric characteristics. A molecular comparison was also performed on two mitochondrial gene sequences (12S rRNA and 16S rRNA gene sequences). While significant differences in measurements were found, the differences were not attributable to sexual dimorphism or the quality of the specimens, but to the sample size and the type of statistical tests. The result of the genetic characterization showed that 12S rRNA and 16S rRNA genes represented robust molecular markers that characterized the species.     

Large-Scale and Mesoscale Distribution of Plankton Biomass and Metabolic Activity in the Northeastern Central Atlantic

Plankton biomass and indices of metabolism and growth [electron transport system (ETS), glutamate dehydrogenase (GDH) and aspartate transcarbamylase (ATC) activities] were studied over a 2,800 km east-west section of the tropical North Atlantic Ocean (21°N) in <200, 200–500 and >;500 µm size classes. On the large-scale, zooplankton (>;200 µm) enzymatic activities increased westward in the study section, where large cyanobacteria chains (Trichodesmium spp.) were observed. Parallel to it, an increase in medium calanoids (1–2 mm length) was observed towards the western part of the transect, whereas small calanoids (<1 mm) were dominant throughout the boundary area of the subtropical gyre. Microplankton ETS and mesoplankton ETS and ATC activities seemed to match the wave length of low frequency waves. Our results suggest that such waves are related to the observed enhancement of metabolic activity of micro- and mesoplankton. The large-scale and mesoscale variability observed give evidence of the inadequacy of assuming a steady-state picture of the euphotic zone of tropical and subtropical waters.     

Alkaline phosphatase activity and its relationship to inorganic phosphorus in the transition zone of the North-western African upwelling system

The enzymatic activity of alkaline phosphatase (APA) was studied in the transition zone between the African upwelling system and the open ocean waters of the Canary Islands region. This region is recurrently dominated by the presence of upwelling filaments that may transport nutrient-enriched waters out into the open ocean before nutrients become exhausted by plankton. Turnover rates by APA were generally low in the whole region, but detectable in all the measurements carried out. On average, turnover rates were higher in the upwelling stations, and APA in those waters seemed to be mainly generated by heterotrophic bacteria to supply easily assimilable organic C. APA outside the upwelling area showed an inverse hyperbolic relationship with increasing phosphate, suggesting the presence of both constitutive and Pi-inducible APA. In these offshore waters, a threshold of 0.1 μM of phosphate could be defined for the regulatory function of Pi on APA. Thus, APA in nutrient-poor waters seemed to be induced to compensate for Pi-deficiency. Turnover rates in the filaments showed basal (probably constitutive) levels, whereas they increased in the surrounding waters, where phosphate concentration presumably did not satisfy plankton P-demands. The fertilising effect of the filaments and associated cyclonic eddies extended to at least 175 km offshore, where basal alkaline phosphatase activities were still found. The magnitude of this effect depends probably on the intensity of upwelling events and the degree of recirculation of filament water back to the coastal jet.     

Temporal variability of Pb fluxes and bioturbation in shelf sediments beneath the high primary production area off Concepción, central-southern Chile (36°S)

We estimated monthly fluxes of ²¹⁰Pb in shelf sediments beneath a high productivity area off central-southern Chile (36°S) during 1 year (September 2002-August 2003). Sediment cores were obtained using a multiple corer and were analyzed mainly for ²¹⁰Pb, total pigments, and macrofauna abundance. The ²¹⁰Pb inventories and fluxes were estimated for surface sediments (0-5 cm) and bioturbation coefficients were inferred using chlorophyll-a (reactive) profiles. In general, ²¹⁰Pb content was inversely correlated with phytodetritus fluxes. High photosynthetic pigment contents in surface sediments were consistently associated with lower ²¹⁰Pb contents. Macrofaunal activity responded to oxygen and organic matter supplies at the sediment surface, generally concentrated in the first centimeters, but particularly so during months of high organic matter fluxes and deficient bottom water oxygen conditions. At this study site, several processes involved in the ²¹⁰Pb surface distribution make it difficult to accurately estimate ages at the surface. We postulate that the organic fluxes promote changes in the faunal activity, which, in combination with sediment resuspension and water circulation over the shelf, produce seasonal variations in the ²¹⁰Pb inventories.     

Microcoleus autumnalis and filamentous algae-dominated mats and chlorophyll-a increase with agricultural land use but respond differently to associated nutrient and sediment enrichment

ABSTRACT

This study investigated the impact of pastoral land use and nutrient and fine sediment inputs on Microcoleus autumnalis and filamentous algae-dominated mats, and benthic chlorophyll-a in streams (lower North Island, New Zealand). Surveying and sampling was undertaken monthly at 61 sites spanning a wide gradient in catchment cover and environmental conditions. Two boosted regression tree models were built. The first models included pastoral land cover and five environmental variables as predictors. In the second model pastoral land cover was replaced by nutrient/sediment data. The abundance of the two mat types and chlorophyll-a increased when pastoral land cover was between 20% and 70% (model 1). Replacement of pastoral land cover by nutrient/sediment data (model 2) slightly improved the model fit for all three periphyton variables. Microcoleus autumnalis-dominant mats increased with dissolved inorganic nitrogen concentrations up to ca. 0.6?mg?L^?1, and in streams with more frequent flushes. In contrast, filamentous algal-dominated mats increased with turbidity, and in streams with less frequent flushes. Chlorophyll-a generally followed the response of the dominant periphyton type. Increased knowledge on responses of specific periphyton types, rather than total biomass, to environmental variables is essential to guide effective management strategies.     

Distribution and transport of organic matter along a filament-eddy system in the Canaries – NW Africa coastal transition zone region

The distribution and transport of chlorophyll a (Chla), particulate (POC) and dissolved (DOC) organic carbon, and the respiratory ETS activity of the microplankton community were studied along a filament-eddy system located in the transition zone between the NW Africa upwelling and Canary Islands waters. Two independent filaments (F1 and F2) stemming from the coastal jet, between Cape Juby and Cape Bojador, merged about 100 km offshore, turning southward and onshore forced by the circulation of a recurrent oceanic cyclonic eddy. In general, the coastal upwelling waters presented higher Chla, but lower POC, DOC and ETS activity than filament waters. However, differences in organic carbon distribution and respiratory activity were observed among stations from the two filaments. The bio-chemical fields were strongly influenced by a complex sub-mesoscale hydrography resulting from the interaction of cyclonic and anticyclonic island eddies with the filaments. The combined F1 + F2 filament system transported 97.1 kg s⁻¹ of excess (non-refractory) total organic carbon (e-TOC), a value comparable to other published estimates from upwelling filaments in the NE Atlantic. About 90% of e-TOC was exported as DOC, since eddy re-circulation precluded the offshore transport of POC. Assuming that the calculated transport of e-TOC is representative of the annual average, the yearly offshore transport (3.1 x 10⁹ kg C) would represent about 25% of the upwelling primary production of the region of study.     

Otolith shape as a stock discrimination tool for ling (Genypterus blacodes) in the fjords of Chilean Patagonia

ABSTRACT

Genypterus blacodes, in terms of its fishing history and local economic importance, is an emblematic species harvested in Chilean Patagonia (41°00’–57°00’S). Most of the current fisheries and biological knowledge of this species come from the open ocean, whereas information about the species in fjords and inner channels is fragmentary. In 2018, two research surveys targeting G. blacodes were conducted in the fjords and inner channels of Chilean Patagonia. A total of 253 pairs of sagittal otoliths were sampled at three different localities, and their contours were modelled using wavelet analysis as a tool for stock discrimination. Contours were compared using canonical analysis, and classification was performed using linear discriminant and Random Forest analyses. The results indicated that the wavelet method is efficient in modelling otolith contours, and the discriminant analyses showed differences among fishing grounds across the latitudinal gradient, thus confirming the hypothesis that G. blacodes conform to at least two separate stock units in Chilean Patagonia. Fishing grounds that were closer in space showed higher levels of misclassification. The discussion focuses on how environmental variables and the geography of fjords shape stock differences and how this information can be used for the sustainable management of G. blacodes.     

The Equatorial Atlantic Mid-Ocean Channel: An Ultra High-Resolution Image of Its Burial History Based on TOPAS Profiles

Multibeam bathymetric and ultra high-resolution seismic data reveal that the distal course of the Equatorial Atlantic Mid-Ocean Channel (EAMOC) extends further east and south than was previously known, and is controlled by the presence of morphologic highs related to the Fernando de Noronha Fracture Zone. Distal course of the EAMOC is buried by sediments, and does not have bathymetric expression on the seafloor. The channel fill consists of three seismic sequences, suggesting that the recent geological evolution of the channel is composed of successive phases of decreasing sedimentary activity that finally resulted in its complete burial. Tectonic and volcanic activity related to the Fernando de Noronha Fracture Zone and Ridge, together with the effect of strong pulses of the Antarctic bottom water current during the upper Pliocene are suggested to have contributed to the progressive burial and the final abandonment of the EAMOC.     

Comparison of Different Techniques of Tilt Testing and Basic Friction Angle Variability Assessment

A relevant parameter for estimating discontinuity shear strength is the basic friction angle, usually derived from different types of tilt tests. However, the tilt tests described in the literature produce varying basic friction angle values. From a large number of different types of tilt tests on different kinds of rocks, it was possible to conclude that the mechanisms of sliding along cylinder generatrixes and planar surfaces are quite different, and that tests based on sliding along generatrixes are not appropriate for determining reliable basic friction angle values for discontinuity planes. Tests on small specimens are also not recommended, for geometry reasons and because ensuring reliable stress conditions is difficult. To quantify the natural variability in tilt testing, large specimens of the same granite were tested. The results revealed coefficients of variation for the basic friction angle in the range of 5–10?%, a variability which is no greater than that found for other rock mechanics parameters. This observation enables to forward some recommendations concerning the appropriate number of tests needed to obtain reliable results.